RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 SKILP12757 684 aa12.46□□□□□ -0.42
SPTB-208ENST00000556626 NLRP6P59044 892 aa12.46□□□□□ -0.42
SPTB-208ENST00000556626 JPH4Q96JJ6 628 aa12.46□□□□□ -0.42
SPTB-208ENST00000556626 ZSCAN16Q9H4T2 348 aaPredicted RBP12.46□□□□□ -0.42
SPTB-208ENST00000556626 UBASH3AP57075 661 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 NOP2P46087 812 aaKnown RBP12.45□□□□□ -0.42
SPTB-208ENST00000556626 ZKSCAN5Q9Y2L8 839 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.45□□□□□ -0.425e-7■■■□□ 15.6
SPTB-208ENST00000556626 CC2D2AQ9P2K1 1620 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 MYL6BP14649 208 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 GJB2P29033 226 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 AMPD3Q01432 767 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 A0A087WZG4 1122 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 CPLX3Q8WVH0 158 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 EXOC6BQ9Y2D4 811 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 SELENOOQ9BVL4 669 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 MTIF2P46199 727 aaKnown RBP12.45□□□□□ -0.42
SPTB-208ENST00000556626 LRP2BPQ9P2M1 347 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 CTAGE15A4D2H0 777 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 CTAGE8P0CG41 777 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 CTAGE6Q86UF2 777 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 CTAGE4Q8IX94 777 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 CCDC141Q6ZP82 1450 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 OGFRQ9NZT2 677 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 SLC12A7Q9Y666 1083 aa12.45□□□□□ -0.42
SPTB-208ENST00000556626 RBM27Q9P2N5 1060 aaKnown RBP12.44□□□□□ -0.42
SPTB-208ENST00000556626 SLU7O95391 586 aaKnown RBP12.44□□□□□ -0.42
SPTB-208ENST00000556626 PLCD3Q8N3E9 789 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 PTPRGP23470 1445 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 GOLGA8BA8MQT2 603 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 BMP2KLQ5H9B9 411 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 IQCGQ9H095 443 aaKnown RBP12.44□□□□□ -0.42
SPTB-208ENST00000556626 KIF5BP33176 963 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 ANO6Q4KMQ2 910 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 SULT6B1Q6IMI4 303 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 FERMT1Q9BQL6 677 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 IL1RAPL2Q9NP60 686 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 SWAP70Q9UH65 585 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 SSRP1Q08945 709 aaKnown RBP12.44□□□□□ -0.42
SPTB-208ENST00000556626 GRIPAP1Q4V328 841 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 NUTM2GQ5VZR2 741 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 ATRIPQ8WXE1 791 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 VPS18Q9P253 973 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 A0A1B0GUA9 196 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 MXRA7P84157 204 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 TBC1D9Q6ZT07 1266 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 TSNARE1Q96NA8 513 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 BTBD11A6QL63 1104 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 BIN1O00499 593 aa12.44□□□□□ -0.42
SPTB-208ENST00000556626 CCDC172P0C7W6 258 aa12.43□□□□□ -0.42
SPTB-208ENST00000556626 XRCC6P12956 609 aaKnown RBP eCLIP12.43□□□□□ -0.422e-6■■□□□ 14.3
SPTB-208ENST00000556626 B4GALNT4Q76KP1 1039 aa12.43□□□□□ -0.42
SPTB-208ENST00000556626 PIBF1Q8WXW3 757 aa12.43□□□□□ -0.42
SPTB-208ENST00000556626 AKAP2Q9Y2D5 859 aa12.43□□□□□ -0.42
SPTB-208ENST00000556626 ATP2C2O75185 946 aa12.43□□□□□ -0.42
SPTB-208ENST00000556626 ATF3P18847 181 aa12.43□□□□□ -0.42
SPTB-208ENST00000556626 C10orf67Q8IYJ2 551 aa12.43□□□□□ -0.42
SPTB-208ENST00000556626 KIF14Q15058 1648 aa12.43□□□□□ -0.42
SPTB-208ENST00000556626 NSD3Q9BZ95 1437 aa12.43□□□□□ -0.42
SPTB-208ENST00000556626 A0A1B0GUL7 405 aa12.43□□□□□ -0.42
SPTB-208ENST00000556626 TUBBP07437 444 aa12.43□□□□□ -0.42
SPTB-208ENST00000556626 NBPF11Q86T75 865 aa12.43□□□□□ -0.42
SPTB-208ENST00000556626 FAM200AQ8TCP9 573 aa12.43□□□□□ -0.42
SPTB-208ENST00000556626 USP5P45974 858 aa12.43□□□□□ -0.42
SPTB-208ENST00000556626 GDPD2Q9HCC8 539 aa12.43□□□□□ -0.42
SPTB-208ENST00000556626 CEP126Q9P2H0 1117 aa12.43□□□□□ -0.42
SPTB-208ENST00000556626 SMC6Q96SB8 1091 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 FCHSD2O94868 740 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 PPP4R3AQ6IN85 833 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 UBA5Q9GZZ9 404 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 CUL7Q14999 1698 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 NOL3O60936 208 aaKnown RBP12.42□□□□□ -0.42
SPTB-208ENST00000556626 PAIP2Q9BPZ3 127 aaKnown RBP12.42□□□□□ -0.42
SPTB-208ENST00000556626 CADPSQ9ULU8 1353 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 IDH1O75874 414 aaKnown RBP12.42□□□□□ -0.42
SPTB-208ENST00000556626 NAA25Q14CX7 972 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 NUTM1Q86Y26 1132 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 ABCC11Q96J66 1382 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 TOP2BQ02880 1626 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 TMEM132EQ6IEE7 984 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 NAPBQ9H115 298 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 HDXQ7Z353 690 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 CCDC114Q96M63 670 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 CTCFLQ8NI51 663 aaPredicted RBP12.42□□□□□ -0.42
SPTB-208ENST00000556626 STIM2Q9P246 746 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 DNAI1Q9UI46 699 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 SERPINA10Q9UK55 444 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 SYNJ1O43426 1573 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 RPGRIP1LQ68CZ1 1315 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 CCDC129Q6ZRS4 1044 aa12.42□□□□□ -0.42
SPTB-208ENST00000556626 ZFYP08048 801 aaPredicted RBP12.41□□□□□ -0.42
SPTB-208ENST00000556626 TTC12Q9H892 705 aaPredicted RBP12.41□□□□□ -0.42
SPTB-208ENST00000556626 RMND1Q9NWS8 449 aa12.41□□□□□ -0.42
SPTB-208ENST00000556626 CALML4Q96GE6 196 aa12.41□□□□□ -0.42
SPTB-208ENST00000556626 RBM28Q9NW13 759 aaKnown RBP12.41□□□□□ -0.42
SPTB-208ENST00000556626 SYT1P21579 422 aa12.41□□□□□ -0.42
SPTB-208ENST00000556626 CYLC1P35663 651 aaPredicted RBP12.41□□□□□ -0.42
SPTB-208ENST00000556626 FAM76AQ8TAV0 307 aa12.41□□□□□ -0.42
SPTB-208ENST00000556626 CTTNBP2Q8WZ74 1663 aa12.41□□□□□ -0.42
SPTB-208ENST00000556626 ATP11AP98196 1134 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms