RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 ZNF592Q92610 1267 aa8.46□□□□□ -1.06
CPSF2-205ENST00000556622 SLC10A4Q96EP9 437 aa8.46□□□□□ -1.06
CPSF2-205ENST00000556622 KCTD15Q96SI1 283 aaPredicted RBP8.46□□□□□ -1.06
CPSF2-205ENST00000556622 RRP7BPQ9NSQ0 103 aa8.46□□□□□ -1.06
CPSF2-205ENST00000556622 COG6Q9Y2V7 657 aa8.46□□□□□ -1.06
CPSF2-205ENST00000556622 DIP2CQ9Y2E4 1556 aa8.46□□□□□ -1.06
CPSF2-205ENST00000556622 DHX29Q7Z478 1369 aaKnown RBP8.46□□□□□ -1.06
CPSF2-205ENST00000556622 CCDC141Q6ZP82 1450 aa8.45□□□□□ -1.06
CPSF2-205ENST00000556622 ATP7AQ04656 1500 aa8.45□□□□□ -1.06
CPSF2-205ENST00000556622 MADDQ8WXG6 1647 aa8.45□□□□□ -1.06
CPSF2-205ENST00000556622 GPR25O00155 361 aa8.45□□□□□ -1.06
CPSF2-205ENST00000556622 PPP1R15AO75807 674 aaPredicted RBP8.45□□□□□ -1.06
CPSF2-205ENST00000556622 NEFLP07196 543 aa8.45□□□□□ -1.06
CPSF2-205ENST00000556622 CCDC125Q86Z20 511 aa8.45□□□□□ -1.06
CPSF2-205ENST00000556622 SEPT12Q8IYM1 358 aa8.45□□□□□ -1.06
CPSF2-205ENST00000556622 BEND7Q8N7W2 519 aaPredicted RBP8.45□□□□□ -1.06
CPSF2-205ENST00000556622 GDPD2Q9HCC8 539 aa8.45□□□□□ -1.06
CPSF2-205ENST00000556622 ABCA6Q8N139 1617 aa8.44□□□□□ -1.06
CPSF2-205ENST00000556622 RIMS1Q86UR5 1692 aaKnown RBP8.44□□□□□ -1.06
CPSF2-205ENST00000556622 SIGLEC1Q9BZZ2 1709 aa8.44□□□□□ -1.06
CPSF2-205ENST00000556622 BAG6P46379 1132 aa8.44□□□□□ -1.06
CPSF2-205ENST00000556622 NBPF20Q3BBV1 942 aa8.44□□□□□ -1.06
CPSF2-205ENST00000556622 ZNF330Q9Y3S2 320 aaPredicted RBP8.44□□□□□ -1.06
CPSF2-205ENST00000556622 WASHC2CQ9Y4E1 1318 aa8.44□□□□□ -1.06
CPSF2-205ENST00000556622 AGLP35573 1532 aa8.44□□□□□ -1.06
CPSF2-205ENST00000556622 FURINP09958 794 aa8.43□□□□□ -1.06
CPSF2-205ENST00000556622 WASHC4Q2M389 1173 aa8.43□□□□□ -1.06
CPSF2-205ENST00000556622 DZIP3Q86Y13 1208 aaKnown RBP8.43□□□□□ -1.06
CPSF2-205ENST00000556622 NEDD1Q8NHV4 660 aa8.43□□□□□ -1.06
CPSF2-205ENST00000556622 MBIPQ9NS73 344 aa8.43□□□□□ -1.06
CPSF2-205ENST00000556622 ZMYM3Q14202 1370 aa8.43□□□□□ -1.06
CPSF2-205ENST00000556622 BCRP11274 1271 aa8.42□□□□□ -1.06
CPSF2-205ENST00000556622 HSPA2P54652 639 aa8.42□□□□□ -1.06
CPSF2-205ENST00000556622 DHX9Q08211 1270 aaKnown RBP8.42□□□□□ -1.06
CPSF2-205ENST00000556622 PODNQ7Z5L7 613 aa8.42□□□□□ -1.06
CPSF2-205ENST00000556622 KRTAP1-3Q8IUG1 177 aa8.42□□□□□ -1.06
CPSF2-205ENST00000556622 ACDQ96AP0 544 aa8.42□□□□□ -1.06
CPSF2-205ENST00000556622 ARHGEF5Q12774 1597 aa8.42□□□□□ -1.06
CPSF2-205ENST00000556622 REREQ9P2R6 1566 aa8.42□□□□□ -1.06
CPSF2-205ENST00000556622 FER1L4A9Z1Z3 1794 aa8.42□□□□□ -1.06
CPSF2-205ENST00000556622 SETD1BQ9UPS6 1966 aaKnown RBP8.42□□□□□ -1.06
CPSF2-205ENST00000556622 ADGBQ8N7X0 1667 aa8.41□□□□□ -1.06
CPSF2-205ENST00000556622 PTPN23Q9H3S7 1636 aa8.41□□□□□ -1.06
CPSF2-205ENST00000556622 ABCC5O15440 1437 aa8.41□□□□□ -1.06
CPSF2-205ENST00000556622 KRBA1A5PL33 1030 aa8.41□□□□□ -1.06
CPSF2-205ENST00000556622 INTS6LQ5JSJ4 861 aaKnown RBP8.41□□□□□ -1.06
CPSF2-205ENST00000556622 ZNF837Q96EG3 531 aaPredicted RBP8.41□□□□□ -1.06
CPSF2-205ENST00000556622 INO80Q9ULG1 1556 aaPredicted RBP8.4□□□□□ -1.06
CPSF2-205ENST00000556622 CNTLNQ9NXG0 1405 aa8.4□□□□□ -1.06
CPSF2-205ENST00000556622 ANKRD30AQ9BXX3 1397 aa8.4□□□□□ -1.06
CPSF2-205ENST00000556622 TCOF1Q13428 1488 aaKnown RBP8.39□□□□□ -1.07
CPSF2-205ENST00000556622 DAPK1P53355 1430 aa8.39□□□□□ -1.07
CPSF2-205ENST00000556622 ROCK1Q13464 1354 aa8.39□□□□□ -1.07
CPSF2-205ENST00000556622 RHOQP17081 205 aa8.39□□□□□ -1.07
CPSF2-205ENST00000556622 ERICH6BQ5W0A0 696 aa8.39□□□□□ -1.07
CPSF2-205ENST00000556622 KDF1Q8NAX2 398 aaPredicted RBP8.39□□□□□ -1.07
CPSF2-205ENST00000556622 POM121Q96HA1 1249 aa8.39□□□□□ -1.07
CPSF2-205ENST00000556622 TMPRSS4Q9NRS4 437 aa8.39□□□□□ -1.07
CPSF2-205ENST00000556622 CEP126Q9P2H0 1117 aa8.39□□□□□ -1.07
CPSF2-205ENST00000556622 KIF15Q9NS87 1388 aa8.38□□□□□ -1.07
CPSF2-205ENST00000556622 GIGYF1O75420 1035 aaPredicted RBP8.38□□□□□ -1.07
CPSF2-205ENST00000556622 SOX11P35716 441 aa8.38□□□□□ -1.07
CPSF2-205ENST00000556622 ABL2P42684 1182 aa8.38□□□□□ -1.07
CPSF2-205ENST00000556622 SNRPNP63162 240 aaKnown RBP8.38□□□□□ -1.07
CPSF2-205ENST00000556622 EIF4G2P78344 907 aaKnown RBP eCLIP8.38□□□□□ -1.07
CPSF2-205ENST00000556622 RNF20Q5VTR2 975 aa8.38□□□□□ -1.07
CPSF2-205ENST00000556622 PHTF2Q8N3S3 785 aa8.38□□□□□ -1.07
CPSF2-205ENST00000556622 FNBP4Q8N3X1 1017 aaPredicted RBP8.38□□□□□ -1.07
CPSF2-205ENST00000556622 PCDHB9Q9Y5E1 797 aa8.38□□□□□ -1.07
CPSF2-205ENST00000556622 A6NJR5 290 aa8.37□□□□□ -1.07
CPSF2-205ENST00000556622 ADD1P35611 737 aaKnown RBP8.37□□□□□ -1.07
CPSF2-205ENST00000556622 DBN1Q16643 649 aa8.37□□□□□ -1.07
CPSF2-205ENST00000556622 LYSMD3Q7Z3D4 306 aa8.37□□□□□ -1.07
CPSF2-205ENST00000556622 MAST1Q9Y2H9 1570 aa8.36□□□□□ -1.07
CPSF2-205ENST00000556622 RAD21O60216 631 aa8.36□□□□□ -1.07
CPSF2-205ENST00000556622 PRICKLE2Q7Z3G6 844 aa8.36□□□□□ -1.07
CPSF2-205ENST00000556622 TRIM22Q8IYM9 498 aa8.36□□□□□ -1.07
CPSF2-205ENST00000556622 TRIM52Q96A61 297 aa8.36□□□□□ -1.07
CPSF2-205ENST00000556622 NAIPQ13075 1403 aa8.36□□□□□ -1.07
CPSF2-205ENST00000556622 NCOA1Q15788 1441 aa8.36□□□□□ -1.07
CPSF2-205ENST00000556622 UHRF1BP1Q6BDS2 1440 aa8.36□□□□□ -1.07
CPSF2-205ENST00000556622 PLXNC1O60486 1568 aa8.35□□□□□ -1.07
CPSF2-205ENST00000556622 DUOX2Q9NRD8 1548 aa8.35□□□□□ -1.07
CPSF2-205ENST00000556622 C3P01024 1663 aa8.35□□□□□ -1.07
CPSF2-205ENST00000556622 CLTCQ00610 1675 aaKnown RBP8.35□□□□□ -1.07
CPSF2-205ENST00000556622 ERVH48-1M5A8F1 160 aa8.35□□□□□ -1.07
CPSF2-205ENST00000556622 LILRA1O75019 489 aa8.35□□□□□ -1.07
CPSF2-205ENST00000556622 ADH1AP07327 375 aa8.35□□□□□ -1.07
CPSF2-205ENST00000556622 VAC14Q08AM6 782 aa8.35□□□□□ -1.07
CPSF2-205ENST00000556622 DDX10Q13206 875 aaKnown RBP8.35□□□□□ -1.07
CPSF2-205ENST00000556622 ZNF784Q8NCA9 323 aaPredicted RBP8.35□□□□□ -1.07
CPSF2-205ENST00000556622 ALG2Q9H553 416 aa8.35□□□□□ -1.07
CPSF2-205ENST00000556622 KANK1Q14678 1352 aa8.35□□□□□ -1.07
CPSF2-205ENST00000556622 LMTK3Q96Q04 1460 aa8.34□□□□□ -1.07
CPSF2-205ENST00000556622 DNMT1P26358 1616 aaKnown RBP8.34□□□□□ -1.07
CPSF2-205ENST00000556622 COL8A1P27658 744 aa8.34□□□□□ -1.07
CPSF2-205ENST00000556622 PTGIRP43119 386 aa8.34□□□□□ -1.07
CPSF2-205ENST00000556622 WWC1Q8IX03 1113 aa8.34□□□□□ -1.07
CPSF2-205ENST00000556622 GTPBP3Q969Y2 492 aaKnown RBP8.34□□□□□ -1.07
CPSF2-205ENST00000556622 CFAP65Q6ZU64 1925 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms