RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 ADRA2BP18089 450 aa22.25■■□□□ 1.15
TUBB3-211ENST00000556536 NPM2Q86SE8 214 aaKnown RBP22.25■■□□□ 1.15
TUBB3-211ENST00000556536 DZIP3Q86Y13 1208 aaKnown RBP22.25■■□□□ 1.15
TUBB3-211ENST00000556536 SGIP1Q9BQI5 828 aa22.25■■□□□ 1.15
TUBB3-211ENST00000556536 NOB1Q9ULX3 412 aaKnown RBP22.25■■□□□ 1.15
TUBB3-211ENST00000556536 SRP68Q9UHB9 627 aaKnown RBP22.24■■□□□ 1.15
TUBB3-211ENST00000556536 UBR3Q6ZT12 1888 aa22.24■■□□□ 1.15
TUBB3-211ENST00000556536 CHD4Q14839 1912 aa22.23■■□□□ 1.15
TUBB3-211ENST00000556536 CAMTA2O94983 1202 aa22.22■■□□□ 1.15
TUBB3-211ENST00000556536 RFC4P35249 363 aa22.22■■□□□ 1.15
TUBB3-211ENST00000556536 KIF6Q6ZMV9 814 aa22.22■■□□□ 1.15
TUBB3-211ENST00000556536 FLAD1Q8NFF5 587 aa22.22■■□□□ 1.15
TUBB3-211ENST00000556536 FRAT1Q92837 279 aaPredicted RBP22.22■■□□□ 1.15
TUBB3-211ENST00000556536 ZBTB3Q9H5J0 574 aa22.22■■□□□ 1.15
TUBB3-211ENST00000556536 NARFQ9UHQ1 456 aa22.22■■□□□ 1.15
TUBB3-211ENST00000556536 MSH5O43196 834 aa22.21■■□□□ 1.15
TUBB3-211ENST00000556536 C1QTNF8P60827 252 aa22.21■■□□□ 1.15
TUBB3-211ENST00000556536 FKBP5Q13451 457 aaPredicted RBP22.21■■□□□ 1.15
TUBB3-211ENST00000556536 USPL1Q5W0Q7 1092 aa22.21■■□□□ 1.15
TUBB3-211ENST00000556536 ANKRD13DQ6ZTN6 518 aa22.21■■□□□ 1.15
TUBB3-211ENST00000556536 MAP3K15Q6ZN16 1313 aa22.21■■□□□ 1.15
TUBB3-211ENST00000556536 USP42Q9H9J4 1324 aaKnown RBP22.21■■□□□ 1.15
TUBB3-211ENST00000556536 TUBGCP6Q96RT7 1819 aa22.2■■□□□ 1.14
TUBB3-211ENST00000556536 HLFQ16534 295 aa22.2■■□□□ 1.14
TUBB3-211ENST00000556536 PLBD2Q8NHP8 589 aa22.2■■□□□ 1.14
TUBB3-211ENST00000556536 BCL2L12Q9HB09 334 aa22.2■■□□□ 1.14
TUBB3-211ENST00000556536 KIF16BQ96L93 1317 aa22.2■■□□□ 1.14
TUBB3-211ENST00000556536 ADCY9O60503 1353 aa22.2■■□□□ 1.14
TUBB3-211ENST00000556536 PI4KAP2A4QPH2 592 aa22.19■■□□□ 1.14
TUBB3-211ENST00000556536 ZPR1O75312 459 aa22.19■■□□□ 1.14
TUBB3-211ENST00000556536 DDX58O95786 925 aaKnown RBP22.19■■□□□ 1.14
TUBB3-211ENST00000556536 KSR2Q6VAB6 950 aa22.19■■□□□ 1.14
TUBB3-211ENST00000556536 PI4KAP1Q8N8J0 262 aa22.19■■□□□ 1.14
TUBB3-211ENST00000556536 TNNQ9UQP3 1299 aa22.19■■□□□ 1.14
TUBB3-211ENST00000556536 PTPRCP08575 1304 aa22.19■■□□□ 1.14
TUBB3-211ENST00000556536 ERVV-1B6SEH8 477 aa22.18■■□□□ 1.14
TUBB3-211ENST00000556536 F6X3S4 739 aa22.18■■□□□ 1.14
TUBB3-211ENST00000556536 RIC3Q7Z5B4 369 aa22.18■■□□□ 1.14
TUBB3-211ENST00000556536 MAP3K2Q9Y2U5 619 aa22.18■■□□□ 1.14
TUBB3-211ENST00000556536 PLIN1O60240 522 aa22.17■■□□□ 1.14
TUBB3-211ENST00000556536 CENPBP07199 599 aaPredicted RBP22.17■■□□□ 1.14
TUBB3-211ENST00000556536 GYS1P13807 737 aa22.17■■□□□ 1.14
TUBB3-211ENST00000556536 ZKSCAN2Q63HK3 967 aa22.16■■□□□ 1.14
TUBB3-211ENST00000556536 ARHGAP45Q92619 1136 aa22.16■■□□□ 1.14
TUBB3-211ENST00000556536 C4AP0C0L4 1744 aa22.16■■□□□ 1.14
TUBB3-211ENST00000556536 IPO8O15397 1037 aaKnown RBP22.15■■□□□ 1.14
TUBB3-211ENST00000556536 TRIM27P14373 513 aa22.15■■□□□ 1.14
TUBB3-211ENST00000556536 FKBP8Q14318 412 aa22.15■■□□□ 1.14
TUBB3-211ENST00000556536 ATF7IPQ6VMQ6 1270 aa22.15■■□□□ 1.14
TUBB3-211ENST00000556536 GIGYF2Q6Y7W6 1299 aaKnown RBP22.15■■□□□ 1.14
TUBB3-211ENST00000556536 API5Q9BZZ5 524 aaKnown RBP22.15■■□□□ 1.14
TUBB3-211ENST00000556536 DNAAF4Q8WXU2 420 aa22.14■■□□□ 1.13
TUBB3-211ENST00000556536 METTL22Q9BUU2 404 aaPredicted RBP22.14■■□□□ 1.13
TUBB3-211ENST00000556536 QSER1Q2KHR3 1735 aa22.14■■□□□ 1.13
TUBB3-211ENST00000556536 RRP1P56182 461 aaKnown RBP22.13■■□□□ 1.13
TUBB3-211ENST00000556536 CLEC4GQ6UXB4 293 aa22.13■■□□□ 1.13
TUBB3-211ENST00000556536 MYD88Q99836 296 aa22.13■■□□□ 1.13
TUBB3-211ENST00000556536 SCN7AQ01118 1682 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 RGL2O15211 777 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 TCIRG1Q13488 830 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 GPR162Q16538 588 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 TBC1D9BQ66K14 1250 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 MSL1Q68DK7 614 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 SLC4A10Q6U841 1118 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 CLUAP1Q96AJ1 413 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 ZNF652Q9Y2D9 606 aa22.12■■□□□ 1.13
TUBB3-211ENST00000556536 SUPT16HQ9Y5B9 1047 aaKnown RBP22.12■■□□□ 1.13
TUBB3-211ENST00000556536 GOLGB1Q14789 3259 aaKnown RBP22.11■■□□□ 1.13
TUBB3-211ENST00000556536 ATP5J2-PTCD1G3V325 749 aa22.11■■□□□ 1.13
TUBB3-211ENST00000556536 ABCC4O15439 1325 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 RNF123Q5XPI4 1314 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 BCORQ6W2J9 1755 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 IGKV5-2P06315 115 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 GPTP24298 496 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 BEND3Q5T5X7 828 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 BICDL1Q6ZP65 573 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 ZNF34Q8IZ26 560 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 ISCA1Q9BUE6 129 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 CACNA1FO60840 1977 aa22.1■■□□□ 1.13
TUBB3-211ENST00000556536 ATP10DQ9P241 1426 aa22.09■■□□□ 1.13
TUBB3-211ENST00000556536 RLBP1P12271 317 aa22.09■■□□□ 1.13
TUBB3-211ENST00000556536 NFIXQ14938 502 aa22.09■■□□□ 1.13
TUBB3-211ENST00000556536 HSP90AB3PQ58FF7 597 aa22.09■■□□□ 1.13
TUBB3-211ENST00000556536 C20orf194Q5TEA3 1177 aa22.09■■□□□ 1.13
TUBB3-211ENST00000556536 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.09■■□□□ 1.13
TUBB3-211ENST00000556536 SLC16A10Q8TF71 515 aa22.09■■□□□ 1.13
TUBB3-211ENST00000556536 UBN2Q6ZU65 1347 aa22.08■■□□□ 1.13
TUBB3-211ENST00000556536 TM4SF1P30408 202 aa22.08■■□□□ 1.13
TUBB3-211ENST00000556536 CWF19L2Q2TBE0 894 aaKnown RBP22.08■■□□□ 1.13
TUBB3-211ENST00000556536 DZIP1LQ8IYY4 767 aaKnown RBP22.08■■□□□ 1.13
TUBB3-211ENST00000556536 NLGN1Q8N2Q7 840 aa22.08■■□□□ 1.13
TUBB3-211ENST00000556536 PANK1Q8TE04 598 aa22.08■■□□□ 1.13
TUBB3-211ENST00000556536 NIP7Q9Y221 180 aaKnown RBP eCLIP22.08■■□□□ 1.13
TUBB3-211ENST00000556536 ARFGEF2Q9Y6D5 1785 aa22.07■■□□□ 1.12
TUBB3-211ENST00000556536 NEXNQ0ZGT2 675 aa22.07■■□□□ 1.12
TUBB3-211ENST00000556536 LINS1Q8NG48 757 aa22.07■■□□□ 1.12
TUBB3-211ENST00000556536 NEURL1BA8MQ27 555 aa22.06■■□□□ 1.12
TUBB3-211ENST00000556536 POLD1P28340 1107 aa22.06■■□□□ 1.12
TUBB3-211ENST00000556536 DDR1Q08345 913 aa22.06■■□□□ 1.12
TUBB3-211ENST00000556536 TRIM28Q13263 835 aaKnown RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms