RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 WWC3Q9ULE0 1092 aa22.1■■□□□ 1.13
PSEN1-217ENST00000556533 NPHP1O15259 732 aa22.09■■□□□ 1.13
PSEN1-217ENST00000556533 GPR162Q16538 588 aa22.09■■□□□ 1.13
PSEN1-217ENST00000556533 CLEC4GQ6UXB4 293 aa22.09■■□□□ 1.13
PSEN1-217ENST00000556533 COPS6Q7L5N1 327 aa22.09■■□□□ 1.13
PSEN1-217ENST00000556533 XAGE3Q8WTP9 111 aa22.09■■□□□ 1.13
PSEN1-217ENST00000556533 LAMB4A4D0S4 1761 aa22.08■■□□□ 1.13
PSEN1-217ENST00000556533 GOLGA2Q08379 1002 aa22.08■■□□□ 1.13
PSEN1-217ENST00000556533 SPINK5Q9NQ38 1064 aaPredicted RBP22.08■■□□□ 1.13
PSEN1-217ENST00000556533 DBF4Q9UBU7 674 aaPredicted RBP22.08■■□□□ 1.13
PSEN1-217ENST00000556533 MAP3K15Q6ZN16 1313 aa22.07■■□□□ 1.12
PSEN1-217ENST00000556533 FANCIQ9NVI1 1328 aa22.07■■□□□ 1.12
PSEN1-217ENST00000556533 A0A0G2JLW4 131 aa22.07■■□□□ 1.12
PSEN1-217ENST00000556533 FAM177BA6PVY3 158 aa22.07■■□□□ 1.12
PSEN1-217ENST00000556533 ERVV-1B6SEH8 477 aa22.07■■□□□ 1.12
PSEN1-217ENST00000556533 NIP7Q9Y221 180 aaKnown RBP eCLIP22.07■■□□□ 1.12
PSEN1-217ENST00000556533 LRP10Q7Z4F1 713 aa22.06■■□□□ 1.12
PSEN1-217ENST00000556533 CCDC24Q8N4L8 307 aa22.06■■□□□ 1.12
PSEN1-217ENST00000556533 MYH16Q9H6N6 1097 aa22.06■■□□□ 1.12
PSEN1-217ENST00000556533 TCERG1O14776 1098 aaKnown RBP22.05■■□□□ 1.12
PSEN1-217ENST00000556533 TWISTNBQ3B726 338 aaPredicted RBP22.05■■□□□ 1.12
PSEN1-217ENST00000556533 CARMIL3Q8ND23 1372 aa22.04■■□□□ 1.12
PSEN1-217ENST00000556533 DPEP1P16444 411 aa22.04■■□□□ 1.12
PSEN1-217ENST00000556533 GPTP24298 496 aa22.04■■□□□ 1.12
PSEN1-217ENST00000556533 TGFB2P61812 414 aa22.04■■□□□ 1.12
PSEN1-217ENST00000556533 EXOSC9Q06265 439 aaKnown RBP22.04■■□□□ 1.12
PSEN1-217ENST00000556533 CCDC30Q5VVM6 783 aa22.04■■□□□ 1.12
PSEN1-217ENST00000556533 NBPF5PQ86XG9 351 aaPredicted RBP22.04■■□□□ 1.12
PSEN1-217ENST00000556533 HYPKQ9NX55 129 aa22.04■■□□□ 1.12
PSEN1-217ENST00000556533 CHMP4AQ9BY43 222 aa22.03■■□□□ 1.12
PSEN1-217ENST00000556533 C10orf71Q711Q0 1435 aa22.03■■□□□ 1.12
PSEN1-217ENST00000556533 RGL2O15211 777 aa22.02■■□□□ 1.12
PSEN1-217ENST00000556533 CNBD1Q8NA66 436 aa22.02■■□□□ 1.12
PSEN1-217ENST00000556533 ZNF521Q96K83 1311 aa22.02■■□□□ 1.12
PSEN1-217ENST00000556533 CHRNA5P30532 468 aa22.01■■□□□ 1.11
PSEN1-217ENST00000556533 PRR5LQ6MZQ0 368 aa22.01■■□□□ 1.11
PSEN1-217ENST00000556533 GIGYF2Q6Y7W6 1299 aaKnown RBP22.01■■□□□ 1.11
PSEN1-217ENST00000556533 STK31Q9BXU1 1019 aa22.01■■□□□ 1.11
PSEN1-217ENST00000556533 SCN7AQ01118 1682 aa22.01■■□□□ 1.11
PSEN1-217ENST00000556533 GTF2E1P29083 439 aaPredicted RBP22■■□□□ 1.11
PSEN1-217ENST00000556533 PHAXQ9H814 394 aaKnown RBP22■■□□□ 1.11
PSEN1-217ENST00000556533 YBX3P16989 372 aaKnown RBP eCLIP21.99■■□□□ 1.11
PSEN1-217ENST00000556533 ST5P78524 1137 aa21.99■■□□□ 1.11
PSEN1-217ENST00000556533 TPTE2Q6XPS3 522 aa21.99■■□□□ 1.11
PSEN1-217ENST00000556533 ANKRD13DQ6ZTN6 518 aa21.99■■□□□ 1.11
PSEN1-217ENST00000556533 PXDNLA1KZ92 1463 aa21.98■■□□□ 1.11
PSEN1-217ENST00000556533 C2CD5Q86YS7 1000 aa21.98■■□□□ 1.11
PSEN1-217ENST00000556533 VAMP4O75379 141 aa21.97■■□□□ 1.11
PSEN1-217ENST00000556533 RIC3Q7Z5B4 369 aa21.97■■□□□ 1.11
PSEN1-217ENST00000556533 ZNF34Q8IZ26 560 aa21.97■■□□□ 1.11
PSEN1-217ENST00000556533 PLBD2Q8NHP8 589 aa21.97■■□□□ 1.11
PSEN1-217ENST00000556533 ZNF428Q96B54 188 aa21.97■■□□□ 1.11
PSEN1-217ENST00000556533 CDCA7LQ96GN5 454 aa21.97■■□□□ 1.11
PSEN1-217ENST00000556533 BRIP1Q9BX63 1249 aa21.97■■□□□ 1.11
PSEN1-217ENST00000556533 E9PSI1 815 aa21.96■■□□□ 1.11
PSEN1-217ENST00000556533 H0YIN7 160 aa21.96■■□□□ 1.11
PSEN1-217ENST00000556533 SLC4A2P04920 1241 aa21.96■■□□□ 1.11
PSEN1-217ENST00000556533 KCNA3P22001 575 aa21.96■■□□□ 1.11
PSEN1-217ENST00000556533 SUSD4Q5VX71 490 aa21.96■■□□□ 1.11
PSEN1-217ENST00000556533 PIM2Q9P1W9 311 aa21.96■■□□□ 1.11
PSEN1-217ENST00000556533 BCS1LQ9Y276 419 aa21.96■■□□□ 1.11
PSEN1-217ENST00000556533 BCORQ6W2J9 1755 aa21.95■■□□□ 1.1
PSEN1-217ENST00000556533 PDE6BP35913 854 aa21.95■■□□□ 1.1
PSEN1-217ENST00000556533 TCIRG1Q13488 830 aa21.95■■□□□ 1.1
PSEN1-217ENST00000556533 HSP90AB3PQ58FF7 597 aa21.95■■□□□ 1.1
PSEN1-217ENST00000556533 NUTM1Q86Y26 1132 aa21.95■■□□□ 1.1
PSEN1-217ENST00000556533 NYXQ9GZU5 481 aa21.95■■□□□ 1.1
PSEN1-217ENST00000556533 UBN2Q6ZU65 1347 aa21.95■■□□□ 1.1
PSEN1-217ENST00000556533 GRIN3BO60391 1043 aa21.94■■□□□ 1.1
PSEN1-217ENST00000556533 HNRNPUQ00839 825 aaKnown RBP eCLIP21.94■■□□□ 1.1
PSEN1-217ENST00000556533 SLFN5Q08AF3 891 aa21.94■■□□□ 1.1
PSEN1-217ENST00000556533 ATP10DQ9P241 1426 aa21.94■■□□□ 1.1
PSEN1-217ENST00000556533 ATP5J2-PTCD1G3V325 749 aa21.93■■□□□ 1.1
PSEN1-217ENST00000556533 DDX58O95786 925 aaKnown RBP21.93■■□□□ 1.1
PSEN1-217ENST00000556533 ERFEQ4G0M1 354 aa21.93■■□□□ 1.1
PSEN1-217ENST00000556533 PARP10Q53GL7 1025 aa21.93■■□□□ 1.1
PSEN1-217ENST00000556533 DALRD3Q5D0E6 543 aaKnown RBP21.93■■□□□ 1.1
PSEN1-217ENST00000556533 PPP1R42Q7Z4L9 355 aa21.93■■□□□ 1.1
PSEN1-217ENST00000556533 ZNF622Q969S3 477 aaKnown RBP eCLIP21.93■■□□□ 1.1
PSEN1-217ENST00000556533 G2E3Q7L622 706 aa21.92■■□□□ 1.1
PSEN1-217ENST00000556533 UTP14AQ9BVJ6 771 aaKnown RBP21.92■■□□□ 1.1
PSEN1-217ENST00000556533 NLRP10Q86W26 655 aa21.9■■□□□ 1.1
PSEN1-217ENST00000556533 MYD88Q99836 296 aa21.9■■□□□ 1.1
PSEN1-217ENST00000556533 AFDNP55196 1824 aaKnown RBP21.9■■□□□ 1.1
PSEN1-217ENST00000556533 NTSR2O95665 410 aa21.89■■□□□ 1.09
PSEN1-217ENST00000556533 TRMT112Q9UI30 125 aaKnown RBP21.89■■□□□ 1.09
PSEN1-217ENST00000556533 PDZRN3Q9UPQ7 1066 aa21.89■■□□□ 1.09
PSEN1-217ENST00000556533 MAP3K2Q9Y2U5 619 aa21.89■■□□□ 1.09
PSEN1-217ENST00000556533 NRXN2Q9P2S2 1712 aa21.89■■□□□ 1.09
PSEN1-217ENST00000556533 ARHGAP27Q6ZUM4 889 aa21.88■■□□□ 1.09
PSEN1-217ENST00000556533 TTLL6Q8N841 843 aa21.88■■□□□ 1.09
PSEN1-217ENST00000556533 N4BP2Q86UW6 1770 aaPredicted RBP21.88■■□□□ 1.09
PSEN1-217ENST00000556533 KIF13BQ9NQT8 1826 aa21.87■■□□□ 1.09
PSEN1-217ENST00000556533 PI4KAP2A4QPH2 592 aa21.87■■□□□ 1.09
PSEN1-217ENST00000556533 KSR2Q6VAB6 950 aa21.87■■□□□ 1.09
PSEN1-217ENST00000556533 PI4KAP1Q8N8J0 262 aa21.87■■□□□ 1.09
PSEN1-217ENST00000556533 ISCA1Q9BUE6 129 aa21.87■■□□□ 1.09
PSEN1-217ENST00000556533 ZNF219Q9P2Y4 722 aaPredicted RBP21.87■■□□□ 1.09
PSEN1-217ENST00000556533 SRGNP10124 158 aa21.86■■□□□ 1.09
PSEN1-217ENST00000556533 FLIIQ13045 1269 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms