RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 SVOPQ8N4V2 548 aa8.26□□□□□ -1.09
SRP54-211ENST00000556445 GAS2L2Q8NHY3 880 aa8.26□□□□□ -1.09
SRP54-211ENST00000556445 SCG3Q8WXD2 468 aaKnown RBP8.26□□□□□ -1.09
SRP54-211ENST00000556445 ACDQ96AP0 544 aa8.26□□□□□ -1.09
SRP54-211ENST00000556445 C2orf49Q9BVC5 232 aaPredicted RBP8.26□□□□□ -1.09
SRP54-211ENST00000556445 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.25□□□□□ -1.09
SRP54-211ENST00000556445 FGFR3P22607 806 aa8.25□□□□□ -1.09
SRP54-211ENST00000556445 CTBSQ01459 385 aa8.25□□□□□ -1.09
SRP54-211ENST00000556445 TNP2Q05952 138 aa8.25□□□□□ -1.09
SRP54-211ENST00000556445 SAMD5Q5TGI4 173 aa8.25□□□□□ -1.09
SRP54-211ENST00000556445 HINFPQ9BQA5 517 aa8.25□□□□□ -1.09
SRP54-211ENST00000556445 PHACTR1Q9C0D0 580 aa8.25□□□□□ -1.09
SRP54-211ENST00000556445 HCN4Q9Y3Q4 1203 aa8.25□□□□□ -1.09
SRP54-211ENST00000556445 GPC6Q9Y625 555 aaPredicted RBP8.25□□□□□ -1.09
SRP54-211ENST00000556445 BAZ1AQ9NRL2 1556 aaPredicted RBP8.25□□□□□ -1.09
SRP54-211ENST00000556445 FAM157BP0CG42 384 aa8.24□□□□□ -1.09
SRP54-211ENST00000556445 IGFBP4P22692 258 aa8.24□□□□□ -1.09
SRP54-211ENST00000556445 MAP2K3P46734 347 aa8.24□□□□□ -1.09
SRP54-211ENST00000556445 FAM200AQ8TCP9 573 aa8.24□□□□□ -1.09
SRP54-211ENST00000556445 ZMIZ1Q9ULJ6 1067 aa8.24□□□□□ -1.09
SRP54-211ENST00000556445 NOVA2Q9UNW9 492 aaKnown RBP8.24□□□□□ -1.09
SRP54-211ENST00000556445 NSFL1CQ9UNZ2 370 aaKnown RBP8.24□□□□□ -1.09
SRP54-211ENST00000556445 CHMP3Q9Y3E7 222 aa8.24□□□□□ -1.09
SRP54-211ENST00000556445 DCDC2BA2VCK2 349 aa8.23□□□□□ -1.09
SRP54-211ENST00000556445 MAPTP10636 758 aaKnown RBP8.23□□□□□ -1.09
SRP54-211ENST00000556445 ELOAQ14241 798 aaKnown RBP8.23□□□□□ -1.09
SRP54-211ENST00000556445 LRRC69Q6ZNQ3 347 aa8.23□□□□□ -1.09
SRP54-211ENST00000556445 RHPN1Q8TCX5 695 aa8.23□□□□□ -1.09
SRP54-211ENST00000556445 CCDC97Q96F63 343 aaPredicted RBP8.23□□□□□ -1.09
SRP54-211ENST00000556445 C1orf115Q9H7X2 142 aa8.23□□□□□ -1.09
SRP54-211ENST00000556445 SERPINA10Q9UK55 444 aa8.23□□□□□ -1.09
SRP54-211ENST00000556445 ADAMTS8Q9UP79 889 aa8.23□□□□□ -1.09
SRP54-211ENST00000556445 GJA3Q9Y6H8 435 aa8.23□□□□□ -1.09
SRP54-211ENST00000556445 EFSO43281 561 aa8.22□□□□□ -1.09
SRP54-211ENST00000556445 BCRP11274 1271 aa8.22□□□□□ -1.09
SRP54-211ENST00000556445 BMP4P12644 408 aa8.22□□□□□ -1.09
SRP54-211ENST00000556445 WEE1P30291 646 aa8.22□□□□□ -1.09
SRP54-211ENST00000556445 ALDH16A1Q8IZ83 802 aa8.22□□□□□ -1.09
SRP54-211ENST00000556445 CHMP7Q8WUX9 453 aaPredicted RBP8.22□□□□□ -1.09
SRP54-211ENST00000556445 OXCT2Q9BYC2 517 aaPredicted RBP8.22□□□□□ -1.09
SRP54-211ENST00000556445 KHNYNO15037 678 aaKnown RBP8.21□□□□□ -1.1
SRP54-211ENST00000556445 ATG7O95352 703 aa8.21□□□□□ -1.1
SRP54-211ENST00000556445 FAM69CQ0P6D2 419 aa8.21□□□□□ -1.1
SRP54-211ENST00000556445 FAM182BQ5T319 152 aa8.21□□□□□ -1.1
SRP54-211ENST00000556445 STK32AQ8WU08 396 aa8.21□□□□□ -1.1
SRP54-211ENST00000556445 STRN4Q9NRL3 753 aa8.21□□□□□ -1.1
SRP54-211ENST00000556445 CD33P20138 364 aa8.2□□□□□ -1.1
SRP54-211ENST00000556445 MAP3K10Q02779 954 aa8.2□□□□□ -1.1
SRP54-211ENST00000556445 PBXIP1Q96AQ6 731 aa8.2□□□□□ -1.1
SRP54-211ENST00000556445 HSH2DQ96JZ2 352 aa8.2□□□□□ -1.1
SRP54-211ENST00000556445 LRRC4BQ9NT99 713 aa8.2□□□□□ -1.1
SRP54-211ENST00000556445 CECR2Q9BXF3 1484 aa8.19□□□□□ -1.1
SRP54-211ENST00000556445 OIP5O43482 229 aa8.19□□□□□ -1.1
SRP54-211ENST00000556445 LAMC2Q13753 1193 aa8.19□□□□□ -1.1
SRP54-211ENST00000556445 C1orf229Q6ZS94 237 aaPredicted RBP8.19□□□□□ -1.1
SRP54-211ENST00000556445 CCDC82Q8N4S0 544 aa8.19□□□□□ -1.1
SRP54-211ENST00000556445 ZNF280CQ8ND82 737 aa8.19□□□□□ -1.1
SRP54-211ENST00000556445 SUSD3Q96L08 255 aa8.19□□□□□ -1.1
SRP54-211ENST00000556445 ACIN1Q9UKV3 1341 aaKnown RBP8.19□□□□□ -1.1
SRP54-211ENST00000556445 BICRAQ9NZM4 1560 aa8.18□□□□□ -1.1
SRP54-211ENST00000556445 SWI5Q1ZZU3 235 aa8.18□□□□□ -1.1
SRP54-211ENST00000556445 NGLY1Q96IV0 654 aa8.18□□□□□ -1.1
SRP54-211ENST00000556445 NEUROD4Q9HD90 331 aa8.18□□□□□ -1.1
SRP54-211ENST00000556445 MROH2BQ7Z745 1585 aa8.18□□□□□ -1.1
SRP54-211ENST00000556445 FOXO3O43524 673 aa8.17□□□□□ -1.1
SRP54-211ENST00000556445 ARAFP10398 606 aa8.17□□□□□ -1.1
SRP54-211ENST00000556445 GSK3AP49840 483 aa8.17□□□□□ -1.1
SRP54-211ENST00000556445 GRIN2CQ14957 1233 aa8.17□□□□□ -1.1
SRP54-211ENST00000556445 RTN1Q16799 776 aa8.17□□□□□ -1.1
SRP54-211ENST00000556445 MARK1Q9P0L2 795 aa8.17□□□□□ -1.1
SRP54-211ENST00000556445 GDF2Q9UK05 429 aaPredicted RBP8.17□□□□□ -1.1
SRP54-211ENST00000556445 TTBK1Q5TCY1 1321 aaPredicted RBP8.17□□□□□ -1.1
SRP54-211ENST00000556445 SHISA8B8ZZ34 492 aa8.16□□□□□ -1.1
SRP54-211ENST00000556445 SMARCA4P51532 1647 aa8.16□□□□□ -1.1
SRP54-211ENST00000556445 TYRO3Q06418 890 aa8.16□□□□□ -1.1
SRP54-211ENST00000556445 SFSWAPQ12872 951 aaKnown RBP8.16□□□□□ -1.1
SRP54-211ENST00000556445 OCLNQ16625 522 aa8.16□□□□□ -1.1
SRP54-211ENST00000556445 TMEM164Q5U3C3 297 aa8.16□□□□□ -1.1
SRP54-211ENST00000556445 SLCO4C1Q6ZQN7 724 aa8.16□□□□□ -1.1
SRP54-211ENST00000556445 GOLGA6L1Q8N7Z2 621 aa8.16□□□□□ -1.1
SRP54-211ENST00000556445 ENAMQ9NRM1 1142 aa8.16□□□□□ -1.1
SRP54-211ENST00000556445 ANKIB1Q9P2G1 1089 aa8.16□□□□□ -1.1
SRP54-211ENST00000556445 KLF15Q9UIH9 416 aa8.16□□□□□ -1.1
SRP54-211ENST00000556445 GGA1Q9UJY5 639 aa8.16□□□□□ -1.1
SRP54-211ENST00000556445 FKBP5Q13451 457 aaPredicted RBP8.15□□□□□ -1.1
SRP54-211ENST00000556445 PRIMPOLQ96LW4 560 aa8.15□□□□□ -1.1
SRP54-211ENST00000556445 QTRT2Q9H974 415 aaKnown RBP8.15□□□□□ -1.1
SRP54-211ENST00000556445 BCS1LQ9Y276 419 aa8.15□□□□□ -1.1
SRP54-211ENST00000556445 KCNMA1Q12791 1236 aa8.14□□□□□ -1.11
SRP54-211ENST00000556445 ZNF468Q5VIY5 522 aaPredicted RBP8.14□□□□□ -1.11
SRP54-211ENST00000556445 GALNT6Q8NCL4 622 aa8.14□□□□□ -1.11
SRP54-211ENST00000556445 CEP63Q96MT8 703 aa8.14□□□□□ -1.11
SRP54-211ENST00000556445 AVENQ9NQS1 362 aaPredicted RBP8.14□□□□□ -1.11
SRP54-211ENST00000556445 NEURL1BA8MQ27 555 aa8.13□□□□□ -1.11
SRP54-211ENST00000556445 PRMT3O60678 531 aa8.13□□□□□ -1.11
SRP54-211ENST00000556445 MARSP56192 900 aaKnown RBP8.13□□□□□ -1.11
SRP54-211ENST00000556445 KCNQ4P56696 695 aa8.13□□□□□ -1.11
SRP54-211ENST00000556445 IER5Q5VY09 327 aa8.13□□□□□ -1.11
SRP54-211ENST00000556445 BTLAQ7Z6A9 289 aa8.13□□□□□ -1.11
SRP54-211ENST00000556445 EDARADDQ8WWZ3 215 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms