RNA–Protein interactions for RNA: ENST00000556272.1

PCNX1-211, Transcript of pecanex 1, humanhuman

TSL 2

Gene PCNX1, Length 2,942 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-211ENST00000556272 USP54Q70EL1 1684 aa9.05□□□□□ -0.96
PCNX1-211ENST00000556272 SDE2Q6IQ49 451 aa9.04□□□□□ -0.96
PCNX1-211ENST00000556272 PNMA2Q9UL42 364 aa9.04□□□□□ -0.96
PCNX1-211ENST00000556272 TWISTNBQ3B726 338 aaPredicted RBP9.04□□□□□ -0.96
PCNX1-211ENST00000556272 MYSM1Q5VVJ2 828 aa9.04□□□□□ -0.96
PCNX1-211ENST00000556272 NUDT16Q96DE0 195 aaKnown RBP9.04□□□□□ -0.96
PCNX1-211ENST00000556272 MBIPQ9NS73 344 aa9.04□□□□□ -0.96
PCNX1-211ENST00000556272 EMILIN3Q9NT22 766 aa9.04□□□□□ -0.96
PCNX1-211ENST00000556272 CEP170BQ9Y4F5 1589 aaPredicted RBP9.04□□□□□ -0.96
PCNX1-211ENST00000556272 N4BP2Q86UW6 1770 aaPredicted RBP9.04□□□□□ -0.96
PCNX1-211ENST00000556272 ZNF142P52746 1687 aaPredicted RBP9.04□□□□□ -0.96
PCNX1-211ENST00000556272 METP08581 1390 aa9.04□□□□□ -0.96
PCNX1-211ENST00000556272 FSD2A1L4K1 749 aa9.04□□□□□ -0.96
PCNX1-211ENST00000556272 CCDC181Q5TID7 509 aa9.04□□□□□ -0.96
PCNX1-211ENST00000556272 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.04□□□□□ -0.96
PCNX1-211ENST00000556272 SPOCK3Q9BQ16 436 aa9.04□□□□□ -0.96
PCNX1-211ENST00000556272 KCNG1Q9UIX4 513 aa9.04□□□□□ -0.96
PCNX1-211ENST00000556272 USP31Q70CQ4 1352 aa9.03□□□□□ -0.96
PCNX1-211ENST00000556272 DIP2AQ14689 1571 aa9.03□□□□□ -0.96
PCNX1-211ENST00000556272 ATG7O95352 703 aa9.03□□□□□ -0.96
PCNX1-211ENST00000556272 IGBP1P78318 339 aa9.03□□□□□ -0.96
PCNX1-211ENST00000556272 TCEAL1Q15170 157 aa9.03□□□□□ -0.96
PCNX1-211ENST00000556272 INTS3Q68E01 1043 aaKnown RBP9.03□□□□□ -0.96
PCNX1-211ENST00000556272 PHACTR3Q96KR7 559 aa9.03□□□□□ -0.96
PCNX1-211ENST00000556272 UCN2Q96RP3 112 aa9.03□□□□□ -0.96
PCNX1-211ENST00000556272 PHF8Q9UPP1 1060 aa9.03□□□□□ -0.96
PCNX1-211ENST00000556272 PTPRCP08575 1304 aa9.03□□□□□ -0.96
PCNX1-211ENST00000556272 TTC21BQ7Z4L5 1316 aa9.03□□□□□ -0.96
PCNX1-211ENST00000556272 SETD1BQ9UPS6 1966 aaKnown RBP9.03□□□□□ -0.96
PCNX1-211ENST00000556272 PDIA6Q15084 440 aa9.03□□□□□ -0.96
PCNX1-211ENST00000556272 WAPLQ7Z5K2 1190 aa9.03□□□□□ -0.96
PCNX1-211ENST00000556272 BEGAINQ9BUH8 593 aa9.03□□□□□ -0.96
PCNX1-211ENST00000556272 MNX1P50219 401 aaPredicted RBP9.02□□□□□ -0.96
PCNX1-211ENST00000556272 EMILIN1Q9Y6C2 1016 aa9.02□□□□□ -0.96
PCNX1-211ENST00000556272 LRRC37A3O60309 1634 aa9.02□□□□□ -0.97
PCNX1-211ENST00000556272 ARHGEF10O15013 1369 aa9.02□□□□□ -0.97
PCNX1-211ENST00000556272 TMEM2Q9UHN6 1383 aa9.02□□□□□ -0.97
PCNX1-211ENST00000556272 PLEKHG1Q9ULL1 1385 aa9.02□□□□□ -0.97
PCNX1-211ENST00000556272 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.02□□□□□ -0.97
PCNX1-211ENST00000556272 MCCP23508 829 aa9.02□□□□□ -0.97
PCNX1-211ENST00000556272 MARSP56192 900 aaKnown RBP9.02□□□□□ -0.97
PCNX1-211ENST00000556272 SKOR2Q2VWA4 1001 aaPredicted RBP9.02□□□□□ -0.97
PCNX1-211ENST00000556272 TANGO6Q9C0B7 1094 aa9.02□□□□□ -0.97
PCNX1-211ENST00000556272 CDC45O75419 566 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 CLEC17AQ6ZS10 378 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 NME9Q86XW9 330 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 RPAP2Q8IXW5 612 aaPredicted RBP9.01□□□□□ -0.97
PCNX1-211ENST00000556272 PHOX2BQ99453 314 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 PEAK1Q9H792 1746 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 GOLGA6L3A6NEY3 463 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 PIK3R5Q8WYR1 880 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 GBP4Q96PP9 640 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 DCTPP1Q9H773 170 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 RGS12O14924 1447 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 USP6P35125 1406 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 ADAMTS13Q76LX8 1427 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 CACNA1FO60840 1977 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 SERPINB4P48594 390 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 APLP1P51693 650 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 LONRF3Q496Y0 759 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 ANKRD45Q5TZF3 282 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 UBA5Q9GZZ9 404 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 SOS1Q07889 1333 aaPredicted RBP9.01□□□□□ -0.97
PCNX1-211ENST00000556272 RTL1A6NKG5 1358 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 SSH2Q76I76 1423 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 ATP10DQ9P241 1426 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 SLIT1O75093 1534 aa9.01□□□□□ -0.97
PCNX1-211ENST00000556272 TTC21AQ8NDW8 1320 aa9□□□□□ -0.97
PCNX1-211ENST00000556272 HMOX1P09601 288 aa9□□□□□ -0.97
PCNX1-211ENST00000556272 HDLBPQ00341 1268 aaKnown RBP9□□□□□ -0.97
PCNX1-211ENST00000556272 FBXO33Q7Z6M2 555 aa9□□□□□ -0.97
PCNX1-211ENST00000556272 CHL1O00533 1208 aa9□□□□□ -0.97
PCNX1-211ENST00000556272 MRE11P49959 708 aa9□□□□□ -0.97
PCNX1-211ENST00000556272 RAD51AP2Q09MP3 1159 aa9□□□□□ -0.97
PCNX1-211ENST00000556272 RAB3GAP1Q15042 981 aa9□□□□□ -0.97
PCNX1-211ENST00000556272 TSPYL6Q8N831 410 aa9□□□□□ -0.97
PCNX1-211ENST00000556272 IQSEC3Q9UPP2 1182 aaPredicted RBP9□□□□□ -0.97
PCNX1-211ENST00000556272 ARHGAP23Q9P227 1491 aa8.99□□□□□ -0.97
PCNX1-211ENST00000556272 SOWAHDA6NJG2 315 aa8.99□□□□□ -0.97
PCNX1-211ENST00000556272 SCNN1AP37088 669 aa8.99□□□□□ -0.97
PCNX1-211ENST00000556272 ZFYVE27Q5T4F4 411 aa8.99□□□□□ -0.97
PCNX1-211ENST00000556272 SIRT2Q8IXJ6 389 aa8.99□□□□□ -0.97
PCNX1-211ENST00000556272 ANKRD44Q8N8A2 993 aa8.99□□□□□ -0.97
PCNX1-211ENST00000556272 SLAIN2Q9P270 581 aa8.99□□□□□ -0.97
PCNX1-211ENST00000556272 TFIP11Q9UBB9 837 aaKnown RBP8.99□□□□□ -0.97
PCNX1-211ENST00000556272 MAGEC2Q9UBF1 373 aaPredicted RBP8.99□□□□□ -0.97
PCNX1-211ENST00000556272 PTPRUQ92729 1446 aa8.99□□□□□ -0.97
PCNX1-211ENST00000556272 IBTKQ9P2D0 1353 aaPredicted RBP8.99□□□□□ -0.97
PCNX1-211ENST00000556272 K7ELQ4 463 aaPredicted RBP8.99□□□□□ -0.97
PCNX1-211ENST00000556272 SSTR3P32745 418 aaPredicted RBP8.99□□□□□ -0.97
PCNX1-211ENST00000556272 TBC1D9Q6ZT07 1266 aa8.99□□□□□ -0.97
PCNX1-211ENST00000556272 THEMISQ8N1K5 641 aaPredicted RBP8.99□□□□□ -0.97
PCNX1-211ENST00000556272 KIF2CQ99661 725 aa8.99□□□□□ -0.97
PCNX1-211ENST00000556272 HSP90AB1P08238 724 aaKnown RBP8.98□□□□□ -0.97
PCNX1-211ENST00000556272 HIC1Q14526 733 aa8.98□□□□□ -0.97
PCNX1-211ENST00000556272 C8orf58Q8NAV2 365 aa8.98□□□□□ -0.97
PCNX1-211ENST00000556272 STK32AQ8WU08 396 aa8.98□□□□□ -0.97
PCNX1-211ENST00000556272 CRB1P82279 1406 aa8.98□□□□□ -0.97
PCNX1-211ENST00000556272 KDRP35968 1356 aa8.98□□□□□ -0.97
PCNX1-211ENST00000556272 RABEP1Q15276 862 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms