RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 ANKRD30BQ9BXX2 1392 aa13.35□□□□□ -0.27
GTF2A1-204ENST00000556268 VARSP26640 1264 aaKnown RBP13.35□□□□□ -0.27
GTF2A1-204ENST00000556268 NBPF14Q5TI25 921 aa13.35□□□□□ -0.27
GTF2A1-204ENST00000556268 TMEM132EQ6IEE7 984 aa13.35□□□□□ -0.27
GTF2A1-204ENST00000556268 STK26Q9P289 416 aa13.35□□□□□ -0.27
GTF2A1-204ENST00000556268 PXDNQ92626 1479 aa13.35□□□□□ -0.27
GTF2A1-204ENST00000556268 ST8SIA5O15466 376 aa13.34□□□□□ -0.27
GTF2A1-204ENST00000556268 AVPP01185 164 aa13.34□□□□□ -0.27
GTF2A1-204ENST00000556268 C4orf48Q5BLP8 95 aa13.34□□□□□ -0.27
GTF2A1-204ENST00000556268 C14orf93Q9H972 538 aaKnown RBP13.34□□□□□ -0.27
GTF2A1-204ENST00000556268 COL22A1Q8NFW1 1626 aaPredicted RBP13.34□□□□□ -0.27
GTF2A1-204ENST00000556268 SPATA31A3Q5VYP0 1347 aa13.34□□□□□ -0.27
GTF2A1-204ENST00000556268 XPCQ01831 940 aaPredicted RBP13.33□□□□□ -0.28
GTF2A1-204ENST00000556268 AGERQ15109 404 aa13.33□□□□□ -0.28
GTF2A1-204ENST00000556268 TMEM259Q4ZIN3 620 aa13.33□□□□□ -0.28
GTF2A1-204ENST00000556268 EPS8L1Q8TE68 723 aa13.33□□□□□ -0.28
GTF2A1-204ENST00000556268 PLEKHH1Q9ULM0 1364 aa13.32□□□□□ -0.28
GTF2A1-204ENST00000556268 PPLO60437 1756 aa13.32□□□□□ -0.28
GTF2A1-204ENST00000556268 BPHLQ86WA6 291 aaPredicted RBP13.32□□□□□ -0.28
GTF2A1-204ENST00000556268 UNC5CLQ8IV45 518 aa13.32□□□□□ -0.28
GTF2A1-204ENST00000556268 SH3BP5LQ7L8J4 393 aa13.31□□□□□ -0.28
GTF2A1-204ENST00000556268 KRT28Q7Z3Y7 464 aa13.31□□□□□ -0.28
GTF2A1-204ENST00000556268 FKBPLQ9UIM3 349 aa13.31□□□□□ -0.28
GTF2A1-204ENST00000556268 CDC42BPGQ6DT37 1551 aa13.31□□□□□ -0.28
GTF2A1-204ENST00000556268 CCDC144AA2RUR9 1427 aa13.3□□□□□ -0.28
GTF2A1-204ENST00000556268 SH3RF1Q7Z6J0 888 aa13.3□□□□□ -0.28
GTF2A1-204ENST00000556268 FAM174AQ8TBP5 190 aa13.3□□□□□ -0.28
GTF2A1-204ENST00000556268 HPS1Q92902 700 aa13.3□□□□□ -0.28
GTF2A1-204ENST00000556268 GPKOWQ92917 476 aaPredicted RBP eCLIP13.3□□□□□ -0.28
GTF2A1-204ENST00000556268 AAASQ9NRG9 546 aa13.3□□□□□ -0.28
GTF2A1-204ENST00000556268 CRIPAKQ8N1N5 446 aa13.29□□□□□ -0.28
GTF2A1-204ENST00000556268 PIK3C2GO75747 1445 aa13.29□□□□□ -0.28
GTF2A1-204ENST00000556268 YTHDC2Q9H6S0 1430 aaKnown RBP13.29□□□□□ -0.28
GTF2A1-204ENST00000556268 SLIT2O94813 1529 aa13.29□□□□□ -0.28
GTF2A1-204ENST00000556268 WASF2Q9Y6W5 498 aa13.28□□□□□ -0.28
GTF2A1-204ENST00000556268 ACIN1Q9UKV3 1341 aaKnown RBP13.28□□□□□ -0.28
GTF2A1-204ENST00000556268 EP400Q96L91 3159 aa13.28□□□□□ -0.28
GTF2A1-204ENST00000556268 MAGEB6P1A0A0J9YX57 407 aa13.27□□□□□ -0.29
GTF2A1-204ENST00000556268 PSME1Q06323 249 aa13.27□□□□□ -0.29
GTF2A1-204ENST00000556268 CTC1Q2NKJ3 1217 aa13.27□□□□□ -0.29
GTF2A1-204ENST00000556268 CFAP70Q5T0N1 1121 aa13.27□□□□□ -0.29
GTF2A1-204ENST00000556268 VPS72Q15906 364 aa13.26□□□□□ -0.29
GTF2A1-204ENST00000556268 MPNDQ8N594 471 aa13.26□□□□□ -0.29
GTF2A1-204ENST00000556268 C1QTNF2Q9BXJ5 285 aa13.26□□□□□ -0.29
GTF2A1-204ENST00000556268 CARD14Q9BXL6 1004 aa13.26□□□□□ -0.29
GTF2A1-204ENST00000556268 TRIM34Q9BYJ4 488 aa13.26□□□□□ -0.29
GTF2A1-204ENST00000556268 ZC3H4Q9UPT8 1303 aaKnown RBP13.26□□□□□ -0.29
GTF2A1-204ENST00000556268 DHX57Q6P158 1386 aaKnown RBP13.25□□□□□ -0.29
GTF2A1-204ENST00000556268 AXIN1O15169 862 aa13.25□□□□□ -0.29
GTF2A1-204ENST00000556268 SMCPP49901 116 aaPredicted RBP13.25□□□□□ -0.29
GTF2A1-204ENST00000556268 PDXDC2PQ6P474 469 aa13.25□□□□□ -0.29
GTF2A1-204ENST00000556268 RALGAPBQ86X10 1494 aa13.24□□□□□ -0.29
GTF2A1-204ENST00000556268 SBNO1A3KN83 1393 aa13.24□□□□□ -0.29
GTF2A1-204ENST00000556268 FAM83GA6ND36 823 aa13.24□□□□□ -0.29
GTF2A1-204ENST00000556268 SEPT12Q8IYM1 358 aa13.24□□□□□ -0.29
GTF2A1-204ENST00000556268 NRXN1Q9ULB1 1477 aa13.23□□□□□ -0.29
GTF2A1-204ENST00000556268 ARID5BQ14865 1188 aa13.23□□□□□ -0.29
GTF2A1-204ENST00000556268 CDK15Q96Q40 435 aa13.23□□□□□ -0.29
GTF2A1-204ENST00000556268 ARHGAP9Q9BRR9 750 aa13.23□□□□□ -0.29
GTF2A1-204ENST00000556268 DACH1Q9UI36 760 aa13.23□□□□□ -0.29
GTF2A1-204ENST00000556268 ADH1CP00326 375 aa13.22□□□□□ -0.29
GTF2A1-204ENST00000556268 PRAM1Q96QH2 718 aa13.22□□□□□ -0.29
GTF2A1-204ENST00000556268 MARF1Q9Y4F3 1742 aaKnown RBP13.22□□□□□ -0.29
GTF2A1-204ENST00000556268 BLMP54132 1417 aaPredicted RBP13.22□□□□□ -0.29
GTF2A1-204ENST00000556268 GLI3P10071 1580 aa13.21□□□□□ -0.29
GTF2A1-204ENST00000556268 NNTQ13423 1086 aa13.21□□□□□ -0.29
GTF2A1-204ENST00000556268 PNMA1Q8ND90 353 aa13.21□□□□□ -0.29
GTF2A1-204ENST00000556268 BANK1Q8NDB2 785 aa13.21□□□□□ -0.29
GTF2A1-204ENST00000556268 KNDC1Q76NI1 1749 aa13.2□□□□□ -0.3
GTF2A1-204ENST00000556268 FMN2Q9NZ56 1722 aa13.2□□□□□ -0.3
GTF2A1-204ENST00000556268 IFT172Q9UG01 1749 aa13.2□□□□□ -0.3
GTF2A1-204ENST00000556268 ERFEQ4G0M1 354 aa13.2□□□□□ -0.3
GTF2A1-204ENST00000556268 TRMT44Q8IYL2 757 aaKnown RBP13.2□□□□□ -0.3
GTF2A1-204ENST00000556268 OCSTAMPQ9BR26 566 aa13.2□□□□□ -0.3
GTF2A1-204ENST00000556268 TNS3Q68CZ2 1445 aa13.2□□□□□ -0.3
GTF2A1-204ENST00000556268 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.19□□□□□ -0.3
GTF2A1-204ENST00000556268 KRT27Q7Z3Y8 459 aa13.19□□□□□ -0.3
GTF2A1-204ENST00000556268 DEFB132Q7Z7B7 95 aa13.19□□□□□ -0.3
GTF2A1-204ENST00000556268 MTMR14Q8NCE2 650 aa13.19□□□□□ -0.3
GTF2A1-204ENST00000556268 ARHGEF10O15013 1369 aa13.19□□□□□ -0.3
GTF2A1-204ENST00000556268 SAFB2Q14151 953 aaKnown RBP eCLIP13.18□□□□□ -0.3
GTF2A1-204ENST00000556268 PMFBP1Q8TBY8 1022 aa13.18□□□□□ -0.3
GTF2A1-204ENST00000556268 POGKQ9P215 609 aa13.18□□□□□ -0.3
GTF2A1-204ENST00000556268 KIF1AQ12756 1690 aa13.18□□□□□ -0.3
GTF2A1-204ENST00000556268 PTK2Q05397 1052 aa13.17□□□□□ -0.3
GTF2A1-204ENST00000556268 SNRKQ9NRH2 765 aa13.17□□□□□ -0.3
GTF2A1-204ENST00000556268 ANKARQ7Z5J8 1434 aa13.16□□□□□ -0.3
GTF2A1-204ENST00000556268 POTECB2RU33 542 aa13.16□□□□□ -0.3
GTF2A1-204ENST00000556268 ZNF787Q6DD87 383 aa13.16□□□□□ -0.3
GTF2A1-204ENST00000556268 ZBTB33Q86T24 672 aa13.16□□□□□ -0.3
GTF2A1-204ENST00000556268 GPSM3Q9Y4H4 160 aa13.16□□□□□ -0.3
GTF2A1-204ENST00000556268 MAP4K5Q9Y4K4 846 aa13.16□□□□□ -0.3
GTF2A1-204ENST00000556268 DLC1Q96QB1 1528 aa13.16□□□□□ -0.3
GTF2A1-204ENST00000556268 USP32Q8NFA0 1604 aa13.16□□□□□ -0.3
GTF2A1-204ENST00000556268 WASLO00401 505 aaPredicted RBP13.15□□□□□ -0.3
GTF2A1-204ENST00000556268 FSHRP23945 695 aa13.15□□□□□ -0.3
GTF2A1-204ENST00000556268 GRM5P41594 1212 aa13.15□□□□□ -0.3
GTF2A1-204ENST00000556268 SF3B2Q13435 895 aaKnown RBP13.15□□□□□ -0.3
GTF2A1-204ENST00000556268 VASH1Q7L8A9 365 aaPredicted RBP13.15□□□□□ -0.3
GTF2A1-204ENST00000556268 TRAK1Q9UPV9 953 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms