RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 ZNF295-AS1Q8N0V1 137 aa6.35□□□□□ -1.39
EFCAB11-210ENST00000556078 AIDAQ96BJ3 306 aa6.35□□□□□ -1.39
EFCAB11-210ENST00000556078 ZDHHC3Q9NYG2 299 aa6.35□□□□□ -1.39
EFCAB11-210ENST00000556078 MARK1Q9P0L2 795 aa6.35□□□□□ -1.39
EFCAB11-210ENST00000556078 SIN3BO75182 1162 aa6.34□□□□□ -1.39
EFCAB11-210ENST00000556078 STAU1O95793 577 aaKnown RBP6.34□□□□□ -1.39
EFCAB11-210ENST00000556078 GRIK4Q16099 956 aa6.34□□□□□ -1.39
EFCAB11-210ENST00000556078 ZIC5Q96T25 663 aa6.34□□□□□ -1.39
EFCAB11-210ENST00000556078 LMTK3Q96Q04 1460 aa6.34□□□□□ -1.4
EFCAB11-210ENST00000556078 C9orf172C9J069 976 aa6.33□□□□□ -1.4
EFCAB11-210ENST00000556078 M0R082 166 aa6.33□□□□□ -1.4
EFCAB11-210ENST00000556078 INHAP05111 366 aa6.33□□□□□ -1.4
EFCAB11-210ENST00000556078 TATP17735 454 aaPredicted RBP6.33□□□□□ -1.4
EFCAB11-210ENST00000556078 SCNN1DP51172 638 aa6.33□□□□□ -1.4
EFCAB11-210ENST00000556078 SYT9Q86SS6 491 aa6.33□□□□□ -1.4
EFCAB11-210ENST00000556078 PHTF2Q8N3S3 785 aa6.33□□□□□ -1.4
EFCAB11-210ENST00000556078 ZNF417Q8TAU3 575 aa6.33□□□□□ -1.4
EFCAB11-210ENST00000556078 ZNF587Q96SQ5 575 aaPredicted RBP6.33□□□□□ -1.4
EFCAB11-210ENST00000556078 STRN4Q9NRL3 753 aa6.33□□□□□ -1.4
EFCAB11-210ENST00000556078 ARID1BQ8NFD5 2236 aaPredicted RBP6.32□□□□□ -1.4
EFCAB11-210ENST00000556078 SMTNP53814 917 aa6.32□□□□□ -1.4
EFCAB11-210ENST00000556078 ADGRE1Q14246 886 aa6.32□□□□□ -1.4
EFCAB11-210ENST00000556078 SIRT1Q96EB6 747 aa6.32□□□□□ -1.4
EFCAB11-210ENST00000556078 PCMTD1Q96MG8 357 aaPredicted RBP6.32□□□□□ -1.4
EFCAB11-210ENST00000556078 DOLKQ9UPQ8 538 aa6.32□□□□□ -1.4
EFCAB11-210ENST00000556078 STARD13Q9Y3M8 1113 aa6.32□□□□□ -1.4
EFCAB11-210ENST00000556078 MRC2Q9UBG0 1479 aa6.31□□□□□ -1.4
EFCAB11-210ENST00000556078 NID1P14543 1247 aa6.31□□□□□ -1.4
EFCAB11-210ENST00000556078 GDF10P55107 478 aa6.31□□□□□ -1.4
EFCAB11-210ENST00000556078 TSGA10IPQ3SY00 556 aa6.31□□□□□ -1.4
EFCAB11-210ENST00000556078 MICALL1Q8N3F8 863 aa6.31□□□□□ -1.4
EFCAB11-210ENST00000556078 TNFRSF25Q93038 417 aa6.31□□□□□ -1.4
EFCAB11-210ENST00000556078 CHIC2Q9UKJ5 165 aa6.31□□□□□ -1.4
EFCAB11-210ENST00000556078 GJA3Q9Y6H8 435 aa6.31□□□□□ -1.4
EFCAB11-210ENST00000556078 NDUFB9Q9Y6M9 179 aa6.31□□□□□ -1.4
EFCAB11-210ENST00000556078 IRAK1P51617 712 aa6.3□□□□□ -1.4
EFCAB11-210ENST00000556078 MBTPS1Q14703 1052 aa6.3□□□□□ -1.4
EFCAB11-210ENST00000556078 TXNRD3Q86VQ6 643 aa6.3□□□□□ -1.4
EFCAB11-210ENST00000556078 TP53INP1Q96A56 240 aa6.3□□□□□ -1.4
EFCAB11-210ENST00000556078 PCMTD2Q9NV79 361 aa6.3□□□□□ -1.4
EFCAB11-210ENST00000556078 IQSEC3Q9UPP2 1182 aaPredicted RBP6.3□□□□□ -1.4
EFCAB11-210ENST00000556078 RNF114Q9Y508 228 aa6.3□□□□□ -1.4
EFCAB11-210ENST00000556078 ATAD2BQ9ULI0 1458 aa6.29□□□□□ -1.4
EFCAB11-210ENST00000556078 CDK2AP1O14519 115 aa6.29□□□□□ -1.4
EFCAB11-210ENST00000556078 CHD1O14646 1710 aa6.29□□□□□ -1.4
EFCAB11-210ENST00000556078 ALBP02768 609 aa6.29□□□□□ -1.4
EFCAB11-210ENST00000556078 MTFR1Q15390 333 aa6.29□□□□□ -1.4
EFCAB11-210ENST00000556078 BANK1Q8NDB2 785 aa6.29□□□□□ -1.4
EFCAB11-210ENST00000556078 LENG1Q96BZ8 264 aaPredicted RBP6.29□□□□□ -1.4
EFCAB11-210ENST00000556078 SLC4A9Q96Q91 983 aa6.29□□□□□ -1.4
EFCAB11-210ENST00000556078 RNF112Q9ULX5 631 aa6.29□□□□□ -1.4
EFCAB11-210ENST00000556078 SELPP16109 830 aa6.28□□□□□ -1.4
EFCAB11-210ENST00000556078 NRG1Q02297 640 aaPredicted RBP6.28□□□□□ -1.4
EFCAB11-210ENST00000556078 C20orf204Q6ZNR8 217 aa6.28□□□□□ -1.4
EFCAB11-210ENST00000556078 HMGXB3Q12766 1538 aa6.27□□□□□ -1.41
EFCAB11-210ENST00000556078 C8orf86Q6ZUL3 223 aa6.27□□□□□ -1.41
EFCAB11-210ENST00000556078 HECW2Q9P2P5 1572 aa6.27□□□□□ -1.41
EFCAB11-210ENST00000556078 A6NJY4 79 aa6.26□□□□□ -1.41
EFCAB11-210ENST00000556078 APBB1O00213 710 aa6.26□□□□□ -1.41
EFCAB11-210ENST00000556078 TAL1P17542 331 aaPredicted RBP6.26□□□□□ -1.41
EFCAB11-210ENST00000556078 ADH7P40394 386 aa6.26□□□□□ -1.41
EFCAB11-210ENST00000556078 SLFNL1Q499Z3 407 aa6.26□□□□□ -1.41
EFCAB11-210ENST00000556078 OXLD1Q5BKU9 147 aa6.26□□□□□ -1.41
EFCAB11-210ENST00000556078 BICDL1Q6ZP65 573 aa6.26□□□□□ -1.41
EFCAB11-210ENST00000556078 MTMR14Q8NCE2 650 aa6.26□□□□□ -1.41
EFCAB11-210ENST00000556078 SSBP4Q9BWG4 385 aaPredicted RBP6.26□□□□□ -1.41
EFCAB11-210ENST00000556078 KIF13AQ9H1H9 1805 aa6.26□□□□□ -1.41
EFCAB11-210ENST00000556078 SMARCA4P51532 1647 aa6.25□□□□□ -1.41
EFCAB11-210ENST00000556078 A0A0A0MRY4 1105 aa6.25□□□□□ -1.41
EFCAB11-210ENST00000556078 TRAPPC3LQ5T215 181 aa6.25□□□□□ -1.41
EFCAB11-210ENST00000556078 GPC6Q9Y625 555 aaPredicted RBP6.25□□□□□ -1.41
EFCAB11-210ENST00000556078 ERCC6L2Q5T890 1561 aa6.25□□□□□ -1.41
EFCAB11-210ENST00000556078 PDS5BQ9NTI5 1447 aa6.25□□□□□ -1.41
EFCAB11-210ENST00000556078 EIF4G2P78344 907 aaKnown RBP eCLIP6.24□□□□□ -1.41
EFCAB11-210ENST00000556078 NEUROD1Q13562 356 aa6.24□□□□□ -1.41
EFCAB11-210ENST00000556078 FBXO41Q8TF61 875 aa6.24□□□□□ -1.41
EFCAB11-210ENST00000556078 SLC30A3Q99726 388 aa6.24□□□□□ -1.41
EFCAB11-210ENST00000556078 CABP1Q9NZU7 370 aa6.24□□□□□ -1.41
EFCAB11-210ENST00000556078 USP3Q9Y6I4 520 aa6.24□□□□□ -1.41
EFCAB11-210ENST00000556078 TMEM229AB2RXF0 380 aa6.23□□□□□ -1.41
EFCAB11-210ENST00000556078 LILRB5O75023 590 aa6.23□□□□□ -1.41
EFCAB11-210ENST00000556078 SSTR4P31391 388 aa6.23□□□□□ -1.41
EFCAB11-210ENST00000556078 MAP7D1Q3KQU3 841 aa6.23□□□□□ -1.41
EFCAB11-210ENST00000556078 SERTAD1Q9UHV2 236 aa6.23□□□□□ -1.41
EFCAB11-210ENST00000556078 TXLNAP40222 546 aa6.22□□□□□ -1.41
EFCAB11-210ENST00000556078 RAC1P63000 192 aa6.22□□□□□ -1.41
EFCAB11-210ENST00000556078 SPEM2Q0P670 501 aa6.22□□□□□ -1.41
EFCAB11-210ENST00000556078 SFSWAPQ12872 951 aaKnown RBP6.22□□□□□ -1.41
EFCAB11-210ENST00000556078 LRRC69Q6ZNQ3 347 aa6.22□□□□□ -1.41
EFCAB11-210ENST00000556078 ZNF608Q9ULD9 1512 aaPredicted RBP6.21□□□□□ -1.42
EFCAB11-210ENST00000556078 DCAF1Q9Y4B6 1507 aa6.21□□□□□ -1.42
EFCAB11-210ENST00000556078 EML1O00423 815 aa6.21□□□□□ -1.42
EFCAB11-210ENST00000556078 C7orf43Q8WVR3 580 aa6.21□□□□□ -1.42
EFCAB11-210ENST00000556078 ZCCHC6Q5VYS8 1495 aaKnown RBP6.21□□□□□ -1.42
EFCAB11-210ENST00000556078 KCNQ4P56696 695 aa6.2□□□□□ -1.42
EFCAB11-210ENST00000556078 TEAD4Q15561 434 aa6.2□□□□□ -1.42
EFCAB11-210ENST00000556078 SHISA2Q6UWI4 295 aa6.2□□□□□ -1.42
EFCAB11-210ENST00000556078 USP21Q9UK80 565 aa6.2□□□□□ -1.42
EFCAB11-210ENST00000556078 PARP3Q9Y6F1 533 aa6.2□□□□□ -1.42
EFCAB11-210ENST00000556078 SLC51AQ86UW1 340 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms