RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 EIF4A1P60842 406 aaKnown RBP10.29□□□□□ -0.76
PTCSC3-201ENST00000556013 NBPF10Q6P3W6 841 aaKnown RBP10.29□□□□□ -0.76
PTCSC3-201ENST00000556013 NBPF15Q8N660 670 aa10.29□□□□□ -0.76
PTCSC3-201ENST00000556013 RRAGCQ9HB90 399 aa10.29□□□□□ -0.76
PTCSC3-201ENST00000556013 PRAMEF22A3QJZ6 481 aa10.28□□□□□ -0.76
PTCSC3-201ENST00000556013 NFKBIEO00221 500 aa10.28□□□□□ -0.76
PTCSC3-201ENST00000556013 NPHP1O15259 732 aa10.28□□□□□ -0.76
PTCSC3-201ENST00000556013 ALDH1B1P30837 517 aa10.28□□□□□ -0.76
PTCSC3-201ENST00000556013 NBPF5PQ86XG9 351 aaPredicted RBP10.28□□□□□ -0.76
PTCSC3-201ENST00000556013 DNAJC5GQ8N7S2 189 aa10.28□□□□□ -0.76
PTCSC3-201ENST00000556013 ERBB4Q15303 1308 aa10.28□□□□□ -0.76
PTCSC3-201ENST00000556013 C21orf2O43822 256 aa10.27□□□□□ -0.77
PTCSC3-201ENST00000556013 NPR1P16066 1061 aa10.27□□□□□ -0.77
PTCSC3-201ENST00000556013 SMC1BQ8NDV3 1235 aa10.27□□□□□ -0.77
PTCSC3-201ENST00000556013 C7orf43Q8WVR3 580 aa10.27□□□□□ -0.77
PTCSC3-201ENST00000556013 NYXQ9GZU5 481 aa10.27□□□□□ -0.77
PTCSC3-201ENST00000556013 NIP7Q9Y221 180 aaKnown RBP eCLIP10.27□□□□□ -0.77
PTCSC3-201ENST00000556013 SBF1O95248 1867 aa10.27□□□□□ -0.77
PTCSC3-201ENST00000556013 MAPK8IP3Q9UPT6 1336 aa10.27□□□□□ -0.77
PTCSC3-201ENST00000556013 PRELPP51888 382 aa10.26□□□□□ -0.77
PTCSC3-201ENST00000556013 RASSF7Q02833 373 aa10.26□□□□□ -0.77
PTCSC3-201ENST00000556013 LMOD3Q0VAK6 560 aa10.26□□□□□ -0.77
PTCSC3-201ENST00000556013 ERFEQ4G0M1 354 aa10.26□□□□□ -0.77
PTCSC3-201ENST00000556013 GRIPAP1Q4V328 841 aa10.26□□□□□ -0.77
PTCSC3-201ENST00000556013 CC2D2BQ6DHV5 1058 aa10.26□□□□□ -0.77
PTCSC3-201ENST00000556013 TAOK3Q9H2K8 898 aa10.26□□□□□ -0.77
PTCSC3-201ENST00000556013 MIS18AQ9NYP9 233 aa10.26□□□□□ -0.77
PTCSC3-201ENST00000556013 RIPK4P57078 832 aa10.25□□□□□ -0.77
PTCSC3-201ENST00000556013 PRPF40BQ6NWY9 871 aaKnown RBP10.25□□□□□ -0.77
PTCSC3-201ENST00000556013 RTKN2Q8IZC4 609 aa10.25□□□□□ -0.77
PTCSC3-201ENST00000556013 MAP3K15Q6ZN16 1313 aa10.25□□□□□ -0.77
PTCSC3-201ENST00000556013 DLEC1Q9Y238 1755 aa10.24□□□□□ -0.77
PTCSC3-201ENST00000556013 GTF2E1P29083 439 aaPredicted RBP10.24□□□□□ -0.77
PTCSC3-201ENST00000556013 PIP4K2AP48426 406 aaPredicted RBP10.24□□□□□ -0.77
PTCSC3-201ENST00000556013 HLFQ16534 295 aa10.24□□□□□ -0.77
PTCSC3-201ENST00000556013 CCDC93Q567U6 631 aa10.24□□□□□ -0.77
PTCSC3-201ENST00000556013 CCDC24Q8N4L8 307 aa10.24□□□□□ -0.77
PTCSC3-201ENST00000556013 SCN7AQ01118 1682 aa10.23□□□□□ -0.77
PTCSC3-201ENST00000556013 POTECB2RU33 542 aa10.23□□□□□ -0.77
PTCSC3-201ENST00000556013 HOXA10P31260 410 aaPredicted RBP10.23□□□□□ -0.77
PTCSC3-201ENST00000556013 TMPOP42166 694 aaKnown RBP10.23□□□□□ -0.77
PTCSC3-201ENST00000556013 CRY2Q49AN0 593 aa10.23□□□□□ -0.77
PTCSC3-201ENST00000556013 PARP10Q53GL7 1025 aa10.23□□□□□ -0.77
PTCSC3-201ENST00000556013 GIGYF2Q6Y7W6 1299 aaKnown RBP10.23□□□□□ -0.77
PTCSC3-201ENST00000556013 KIF6Q6ZMV9 814 aa10.23□□□□□ -0.77
PTCSC3-201ENST00000556013 ZNF34Q8IZ26 560 aa10.23□□□□□ -0.77
PTCSC3-201ENST00000556013 JMYQ8N9B5 988 aa10.23□□□□□ -0.77
PTCSC3-201ENST00000556013 RRP7AQ9Y3A4 280 aaKnown RBP10.23□□□□□ -0.77
PTCSC3-201ENST00000556013 IBTKQ9P2D0 1353 aaPredicted RBP10.23□□□□□ -0.77
PTCSC3-201ENST00000556013 IQCA1LA6NCM1 817 aa10.22□□□□□ -0.77
PTCSC3-201ENST00000556013 FKBP4Q02790 459 aaKnown RBP eCLIP10.22□□□□□ -0.77
PTCSC3-201ENST00000556013 SLC10A5Q5PT55 438 aa10.22□□□□□ -0.77
PTCSC3-201ENST00000556013 IFFO2Q5TF58 517 aa10.22□□□□□ -0.77
PTCSC3-201ENST00000556013 PPP1R42Q7Z4L9 355 aa10.22□□□□□ -0.77
PTCSC3-201ENST00000556013 KLRG1Q96E93 195 aa10.22□□□□□ -0.77
PTCSC3-201ENST00000556013 TSPYL4Q9UJ04 414 aa10.22□□□□□ -0.77
PTCSC3-201ENST00000556013 MYBBP1AQ9BQG0 1328 aaKnown RBP10.22□□□□□ -0.77
PTCSC3-201ENST00000556013 ANKRD31Q8N7Z5 1873 aa10.21□□□□□ -0.77
PTCSC3-201ENST00000556013 CHL1O00533 1208 aa10.21□□□□□ -0.77
PTCSC3-201ENST00000556013 DDX10Q13206 875 aaKnown RBP10.21□□□□□ -0.77
PTCSC3-201ENST00000556013 HSP90AB3PQ58FF7 597 aa10.21□□□□□ -0.77
PTCSC3-201ENST00000556013 TTLL7Q6ZT98 887 aa10.21□□□□□ -0.77
PTCSC3-201ENST00000556013 LRP10Q7Z4F1 713 aa10.21□□□□□ -0.77
PTCSC3-201ENST00000556013 RUNDC1Q96C34 613 aa10.21□□□□□ -0.77
PTCSC3-201ENST00000556013 L3MBTL3Q96JM7 780 aaPredicted RBP10.21□□□□□ -0.77
PTCSC3-201ENST00000556013 CRAMP1Q96RY5 1269 aa10.21□□□□□ -0.77
PTCSC3-201ENST00000556013 PSMD1Q99460 953 aa10.21□□□□□ -0.77
PTCSC3-201ENST00000556013 VPS33BQ9H267 617 aa10.21□□□□□ -0.77
PTCSC3-201ENST00000556013 RNF123Q5XPI4 1314 aa10.21□□□□□ -0.78
PTCSC3-201ENST00000556013 RIC1Q4ADV7 1423 aa10.21□□□□□ -0.78
PTCSC3-201ENST00000556013 FER1L6Q2WGJ9 1857 aa10.21□□□□□ -0.78
PTCSC3-201ENST00000556013 HOXB7P09629 217 aa10.2□□□□□ -0.78
PTCSC3-201ENST00000556013 PDIA6Q15084 440 aa10.2□□□□□ -0.78
PTCSC3-201ENST00000556013 BCORQ6W2J9 1755 aa10.2□□□□□ -0.78
PTCSC3-201ENST00000556013 NGEFQ8N5V2 710 aa10.2□□□□□ -0.78
PTCSC3-201ENST00000556013 NLRP3Q96P20 1036 aa10.2□□□□□ -0.78
PTCSC3-201ENST00000556013 THUMPD2Q9BTF0 503 aaKnown RBP10.2□□□□□ -0.78
PTCSC3-201ENST00000556013 TNRC6CQ9HCJ0 1690 aaKnown RBP10.2□□□□□ -0.78
PTCSC3-201ENST00000556013 ZNF219Q9P2Y4 722 aaPredicted RBP10.2□□□□□ -0.78
PTCSC3-201ENST00000556013 SLX4Q8IY92 1834 aa10.19□□□□□ -0.78
PTCSC3-201ENST00000556013 FZD9O00144 591 aa10.19□□□□□ -0.78
PTCSC3-201ENST00000556013 DDNO94850 711 aaPredicted RBP10.19□□□□□ -0.78
PTCSC3-201ENST00000556013 MYL6BP14649 208 aa10.19□□□□□ -0.78
PTCSC3-201ENST00000556013 SUSD4Q5VX71 490 aa10.19□□□□□ -0.78
PTCSC3-201ENST00000556013 SYNE4Q8N205 404 aa10.19□□□□□ -0.78
PTCSC3-201ENST00000556013 RBM17Q96I25 401 aaKnown RBP10.19□□□□□ -0.78
PTCSC3-201ENST00000556013 WDR90Q96KV7 1748 aa10.19□□□□□ -0.78
PTCSC3-201ENST00000556013 DICER1Q9UPY3 1922 aaKnown RBP10.18□□□□□ -0.78
PTCSC3-201ENST00000556013 FAM177BA6PVY3 158 aa10.18□□□□□ -0.78
PTCSC3-201ENST00000556013 EIF2S2P20042 333 aaKnown RBP10.18□□□□□ -0.78
PTCSC3-201ENST00000556013 IARSP41252 1262 aaKnown RBP10.18□□□□□ -0.78
PTCSC3-201ENST00000556013 WDR43Q15061 677 aaKnown RBP eCLIP10.18□□□□□ -0.78
PTCSC3-201ENST00000556013 CHADLQ6NUI6 762 aa10.18□□□□□ -0.78
PTCSC3-201ENST00000556013 JDP2Q8WYK2 163 aa10.18□□□□□ -0.78
PTCSC3-201ENST00000556013 UTP14AQ9BVJ6 771 aaKnown RBP10.18□□□□□ -0.78
PTCSC3-201ENST00000556013 CHMP4AQ9BY43 222 aa10.18□□□□□ -0.78
PTCSC3-201ENST00000556013 TMX4Q9H1E5 349 aaPredicted RBP10.18□□□□□ -0.78
PTCSC3-201ENST00000556013 DDX21Q9NR30 783 aaKnown RBP eCLIP10.18□□□□□ -0.78
PTCSC3-201ENST00000556013 DLG5Q8TDM6 1919 aa10.17□□□□□ -0.78
PTCSC3-201ENST00000556013 CCDC88AQ3V6T2 1871 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms