RNA–Protein interactions for RNA: ENST00000555668.5

GPHN-210, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-210ENST00000555668 CHMP3Q9Y3E7 222 aa5.69□□□□□ -1.5
GPHN-210ENST00000555668 SHISA8B8ZZ34 492 aa5.68□□□□□ -1.5
GPHN-210ENST00000555668 M0R2N6 131 aa5.68□□□□□ -1.5
GPHN-210ENST00000555668 FAM157BP0CG42 384 aa5.68□□□□□ -1.5
GPHN-210ENST00000555668 DEKP35659 375 aaKnown RBP5.68□□□□□ -1.5
GPHN-210ENST00000555668 SAMD5Q5TGI4 173 aa5.68□□□□□ -1.5
GPHN-210ENST00000555668 SLCO4C1Q6ZQN7 724 aa5.68□□□□□ -1.5
GPHN-210ENST00000555668 SIX5Q8N196 739 aa5.68□□□□□ -1.5
GPHN-210ENST00000555668 ZNF594Q96JF6 807 aaPredicted RBP5.68□□□□□ -1.5
GPHN-210ENST00000555668 CALR3Q96L12 384 aaKnown RBP5.68□□□□□ -1.5
GPHN-210ENST00000555668 NEUROD4Q9HD90 331 aa5.68□□□□□ -1.5
GPHN-210ENST00000555668 GPC6Q9Y625 555 aaPredicted RBP5.68□□□□□ -1.5
GPHN-210ENST00000555668 SFI1A8K8P3 1242 aa5.67□□□□□ -1.5
GPHN-210ENST00000555668 EML1O00423 815 aa5.67□□□□□ -1.5
GPHN-210ENST00000555668 CD33P20138 364 aa5.67□□□□□ -1.5
GPHN-210ENST00000555668 RASA1P20936 1047 aa5.67□□□□□ -1.5
GPHN-210ENST00000555668 AMPD1P23109 780 aa5.67□□□□□ -1.5
GPHN-210ENST00000555668 BRD2P25440 801 aaKnown RBP5.67□□□□□ -1.5
GPHN-210ENST00000555668 PSMA6P60900 246 aaKnown RBP5.67□□□□□ -1.5
GPHN-210ENST00000555668 SNRPNP63162 240 aaKnown RBP5.67□□□□□ -1.5
GPHN-210ENST00000555668 AAMPQ13685 434 aa5.67□□□□□ -1.5
GPHN-210ENST00000555668 NPM2Q86SE8 214 aaKnown RBP5.67□□□□□ -1.5
GPHN-210ENST00000555668 CCDC136Q96JN2 1154 aa5.67□□□□□ -1.5
GPHN-210ENST00000555668 TSPAN10Q9H1Z9 355 aaPredicted RBP5.67□□□□□ -1.5
GPHN-210ENST00000555668 RRAGCQ9HB90 399 aa5.67□□□□□ -1.5
GPHN-210ENST00000555668 HCN2Q9UL51 889 aa5.67□□□□□ -1.5
GPHN-210ENST00000555668 MKL2Q9ULH7 1088 aa5.67□□□□□ -1.5
GPHN-210ENST00000555668 MAFBQ9Y5Q3 323 aaPredicted RBP5.67□□□□□ -1.5
GPHN-210ENST00000555668 NEURL1BA8MQ27 555 aa5.66□□□□□ -1.5
GPHN-210ENST00000555668 IGHA1P01876 353 aa5.66□□□□□ -1.5
GPHN-210ENST00000555668 EPXP11678 715 aa5.66□□□□□ -1.5
GPHN-210ENST00000555668 ADH6P28332 368 aa5.66□□□□□ -1.5
GPHN-210ENST00000555668 LAMC2Q13753 1193 aa5.66□□□□□ -1.5
GPHN-210ENST00000555668 DIEXFQ68CQ4 756 aaKnown RBP5.66□□□□□ -1.5
GPHN-210ENST00000555668 GPAT2Q6NUI2 795 aa5.66□□□□□ -1.5
GPHN-210ENST00000555668 LARP1Q6PKG0 1096 aaKnown RBP5.66□□□□□ -1.5
GPHN-210ENST00000555668 LRRC69Q6ZNQ3 347 aa5.66□□□□□ -1.5
GPHN-210ENST00000555668 TSEN2Q8NCE0 465 aaKnown RBP5.66□□□□□ -1.5
GPHN-210ENST00000555668 BTBD6Q96KE9 485 aa5.66□□□□□ -1.5
GPHN-210ENST00000555668 PPP1R12CQ9BZL4 782 aa5.66□□□□□ -1.5
GPHN-210ENST00000555668 AVENQ9NQS1 362 aaPredicted RBP5.66□□□□□ -1.5
GPHN-210ENST00000555668 MARK1Q9P0L2 795 aa5.66□□□□□ -1.5
GPHN-210ENST00000555668 PRR12Q9ULL5 1215 aa5.66□□□□□ -1.5
GPHN-210ENST00000555668 EFSO43281 561 aa5.65□□□□□ -1.5
GPHN-210ENST00000555668 DKK1O94907 266 aa5.65□□□□□ -1.5
GPHN-210ENST00000555668 SEC13P55735 322 aa5.65□□□□□ -1.5
GPHN-210ENST00000555668 SH3PXD2AQ5TCZ1 1133 aa5.65□□□□□ -1.5
GPHN-210ENST00000555668 C1orf53Q5VUE5 145 aa5.65□□□□□ -1.5
GPHN-210ENST00000555668 RHPN1Q8TCX5 695 aa5.65□□□□□ -1.5
GPHN-210ENST00000555668 C7orf43Q8WVR3 580 aa5.65□□□□□ -1.5
GPHN-210ENST00000555668 DCAF5Q96JK2 942 aa5.65□□□□□ -1.5
GPHN-210ENST00000555668 HCN4Q9Y3Q4 1203 aa5.65□□□□□ -1.5
GPHN-210ENST00000555668 PPP1R12BO60237 982 aaPredicted RBP5.64□□□□□ -1.51
GPHN-210ENST00000555668 HIRAP54198 1017 aaPredicted RBP5.64□□□□□ -1.51
GPHN-210ENST00000555668 POTEAQ6S8J7 498 aa5.64□□□□□ -1.51
GPHN-210ENST00000555668 GAS2L2Q8NHY3 880 aa5.64□□□□□ -1.51
GPHN-210ENST00000555668 STRN4Q9NRL3 753 aa5.64□□□□□ -1.51
GPHN-210ENST00000555668 ANKIB1Q9P2G1 1089 aa5.64□□□□□ -1.51
GPHN-210ENST00000555668 KLF15Q9UIH9 416 aa5.64□□□□□ -1.51
GPHN-210ENST00000555668 FANCIQ9NVI1 1328 aa5.64□□□□□ -1.51
GPHN-210ENST00000555668 PIK3R2O00459 728 aa5.63□□□□□ -1.51
GPHN-210ENST00000555668 PCBP4P57723 403 aaKnown RBP5.63□□□□□ -1.51
GPHN-210ENST00000555668 KANK4Q5T7N3 995 aaPredicted RBP5.63□□□□□ -1.51
GPHN-210ENST00000555668 ZNF468Q5VIY5 522 aaPredicted RBP5.63□□□□□ -1.51
GPHN-210ENST00000555668 LINC00114Q6XXX2 140 aa5.63□□□□□ -1.51
GPHN-210ENST00000555668 PHACTR1Q9C0D0 580 aa5.63□□□□□ -1.51
GPHN-210ENST00000555668 VRTNQ9H8Y1 702 aa5.63□□□□□ -1.51
GPHN-210ENST00000555668 CDK11AQ9UQ88 783 aaPredicted RBP5.63□□□□□ -1.51
GPHN-210ENST00000555668 SUPT16HQ9Y5B9 1047 aaKnown RBP5.63□□□□□ -1.51
GPHN-210ENST00000555668 ATAD2Q6PL18 1390 aa5.63□□□□□ -1.51
GPHN-210ENST00000555668 C21orf2O43822 256 aa5.62□□□□□ -1.51
GPHN-210ENST00000555668 HOXB4P17483 251 aaPredicted RBP5.62□□□□□ -1.51
GPHN-210ENST00000555668 LMOD1P29536 600 aaPredicted RBP5.62□□□□□ -1.51
GPHN-210ENST00000555668 PTK7Q13308 1070 aa5.62□□□□□ -1.51
GPHN-210ENST00000555668 PLA2G4EQ3MJ16 856 aa5.62□□□□□ -1.51
GPHN-210ENST00000555668 CRTC2Q53ET0 693 aaPredicted RBP5.62□□□□□ -1.51
GPHN-210ENST00000555668 ALYREFQ86V81 257 aaKnown RBP5.62□□□□□ -1.51
GPHN-210ENST00000555668 FCHSD1Q86WN1 690 aa5.62□□□□□ -1.51
GPHN-210ENST00000555668 STAG2Q8N3U4 1231 aa5.62□□□□□ -1.51
GPHN-210ENST00000555668 SCG3Q8WXD2 468 aaKnown RBP5.62□□□□□ -1.51
GPHN-210ENST00000555668 HINFPQ9BQA5 517 aa5.62□□□□□ -1.51
GPHN-210ENST00000555668 FAM196BA6NMK8 535 aa5.61□□□□□ -1.51
GPHN-210ENST00000555668 GNB5O14775 395 aa5.61□□□□□ -1.51
GPHN-210ENST00000555668 SFSWAPQ12872 951 aaKnown RBP5.61□□□□□ -1.51
GPHN-210ENST00000555668 DPYDQ12882 1025 aa5.61□□□□□ -1.51
GPHN-210ENST00000555668 CHSY3Q70JA7 882 aa5.61□□□□□ -1.51
GPHN-210ENST00000555668 ANKMY2Q8IV38 441 aa5.61□□□□□ -1.51
GPHN-210ENST00000555668 ALDH16A1Q8IZ83 802 aa5.61□□□□□ -1.51
GPHN-210ENST00000555668 CCER1Q8TC90 406 aaPredicted RBP5.61□□□□□ -1.51
GPHN-210ENST00000555668 CHMP7Q8WUX9 453 aaPredicted RBP5.61□□□□□ -1.51
GPHN-210ENST00000555668 HSH2DQ96JZ2 352 aa5.61□□□□□ -1.51
GPHN-210ENST00000555668 SUSD3Q96L08 255 aa5.61□□□□□ -1.51
GPHN-210ENST00000555668 CEP63Q96MT8 703 aa5.61□□□□□ -1.51
GPHN-210ENST00000555668 YTHDC1Q96MU7 727 aaKnown RBP5.61□□□□□ -1.51
GPHN-210ENST00000555668 C2orf49Q9BVC5 232 aaPredicted RBP5.61□□□□□ -1.51
GPHN-210ENST00000555668 ZMYND15Q9H091 742 aa5.61□□□□□ -1.51
GPHN-210ENST00000555668 ZNF777Q9ULD5 760 aaPredicted RBP5.61□□□□□ -1.51
GPHN-210ENST00000555668 USP17L15C9J2P7 530 aa5.6□□□□□ -1.51
GPHN-210ENST00000555668 USP17L10C9JJH3 530 aa5.6□□□□□ -1.51
GPHN-210ENST00000555668 USP17L13C9JLJ4 530 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms