RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 B4GALNT3Q6L9W6 998 aa7.68□□□□□ -1.18
KTN1-222ENST00000555506 NIFKQ9BYG3 293 aaKnown RBP7.68□□□□□ -1.18
KTN1-222ENST00000555506 MSX1P28360 303 aa7.67□□□□□ -1.18
KTN1-222ENST00000555506 TBCELQ5QJ74 424 aa7.67□□□□□ -1.18
KTN1-222ENST00000555506 ALYREFQ86V81 257 aaKnown RBP7.67□□□□□ -1.18
KTN1-222ENST00000555506 GPR25O00155 361 aa7.66□□□□□ -1.18
KTN1-222ENST00000555506 TSEN2Q8NCE0 465 aaKnown RBP7.66□□□□□ -1.18
KTN1-222ENST00000555506 FAM200AQ8TCP9 573 aa7.66□□□□□ -1.18
KTN1-222ENST00000555506 ZDHHC1Q8WTX9 485 aa7.66□□□□□ -1.18
KTN1-222ENST00000555506 GMCL1Q96IK5 515 aa7.66□□□□□ -1.18
KTN1-222ENST00000555506 RUBCNLQ9H714 662 aa7.66□□□□□ -1.18
KTN1-222ENST00000555506 CABP1Q9NZU7 370 aa7.66□□□□□ -1.18
KTN1-222ENST00000555506 PARP3Q9Y6F1 533 aa7.66□□□□□ -1.18
KTN1-222ENST00000555506 H7C1W4 665 aa7.65□□□□□ -1.18
KTN1-222ENST00000555506 GAS6Q14393 721 aa7.65□□□□□ -1.18
KTN1-222ENST00000555506 ANKMY2Q8IV38 441 aa7.65□□□□□ -1.18
KTN1-222ENST00000555506 SLC9A9Q8IVB4 645 aa7.65□□□□□ -1.18
KTN1-222ENST00000555506 GTPBP3Q969Y2 492 aaKnown RBP7.65□□□□□ -1.18
KTN1-222ENST00000555506 NUCKS1Q9H1E3 243 aaKnown RBP7.65□□□□□ -1.18
KTN1-222ENST00000555506 M0R2N6 131 aa7.64□□□□□ -1.19
KTN1-222ENST00000555506 ATP4AP20648 1035 aa7.64□□□□□ -1.19
KTN1-222ENST00000555506 FAM69CQ0P6D2 419 aa7.64□□□□□ -1.19
KTN1-222ENST00000555506 AIDAQ96BJ3 306 aa7.64□□□□□ -1.19
KTN1-222ENST00000555506 TSPAN10Q9H1Z9 355 aaPredicted RBP7.64□□□□□ -1.19
KTN1-222ENST00000555506 IVNS1ABPQ9Y6Y0 642 aa7.64□□□□□ -1.19
KTN1-222ENST00000555506 DPYDQ12882 1025 aa7.63□□□□□ -1.19
KTN1-222ENST00000555506 UBAP2LQ14157 1087 aaKnown RBP7.63□□□□□ -1.19
KTN1-222ENST00000555506 NPM2Q86SE8 214 aaKnown RBP7.63□□□□□ -1.19
KTN1-222ENST00000555506 GNEQ9Y223 722 aaKnown RBP7.63□□□□□ -1.19
KTN1-222ENST00000555506 TXLNAP40222 546 aa7.62□□□□□ -1.19
KTN1-222ENST00000555506 MFAP1P55081 439 aaKnown RBP7.62□□□□□ -1.19
KTN1-222ENST00000555506 SEC13P55735 322 aa7.62□□□□□ -1.19
KTN1-222ENST00000555506 SH3PXD2AQ5TCZ1 1133 aa7.62□□□□□ -1.19
KTN1-222ENST00000555506 CRISPLD1Q9H336 500 aa7.62□□□□□ -1.19
KTN1-222ENST00000555506 RBM19Q9Y4C8 960 aaKnown RBP7.62□□□□□ -1.19
KTN1-222ENST00000555506 LGR5O75473 907 aa7.62□□□□□ -1.19
KTN1-222ENST00000555506 NOS2P35228 1153 aa7.62□□□□□ -1.19
KTN1-222ENST00000555506 TEAD4Q15561 434 aa7.62□□□□□ -1.19
KTN1-222ENST00000555506 SWI5Q1ZZU3 235 aa7.62□□□□□ -1.19
KTN1-222ENST00000555506 PHLDB3Q6NSJ2 640 aa7.62□□□□□ -1.19
KTN1-222ENST00000555506 CLP1Q92989 425 aaKnown RBP7.62□□□□□ -1.19
KTN1-222ENST00000555506 L3MBTL2Q969R5 705 aa7.62□□□□□ -1.19
KTN1-222ENST00000555506 KRTAP17-1Q9BYP8 105 aa7.62□□□□□ -1.19
KTN1-222ENST00000555506 C21orf2O43822 256 aa7.61□□□□□ -1.19
KTN1-222ENST00000555506 SSFA2P28290 1259 aa7.61□□□□□ -1.19
KTN1-222ENST00000555506 NBPF1Q3BBV0 1214 aa7.61□□□□□ -1.19
KTN1-222ENST00000555506 ZMYM1Q5SVZ6 1142 aa7.61□□□□□ -1.19
KTN1-222ENST00000555506 PGBD3Q8N328 593 aa7.61□□□□□ -1.19
KTN1-222ENST00000555506 RGS22Q8NE09 1264 aa7.61□□□□□ -1.19
KTN1-222ENST00000555506 ZDHHC3Q9NYG2 299 aa7.61□□□□□ -1.19
KTN1-222ENST00000555506 SLAIN2Q9P270 581 aa7.61□□□□□ -1.19
KTN1-222ENST00000555506 BCRP11274 1271 aa7.6□□□□□ -1.19
KTN1-222ENST00000555506 RANGAP1P46060 587 aaPredicted RBP7.6□□□□□ -1.19
KTN1-222ENST00000555506 FOXR1Q6PIV2 292 aa7.6□□□□□ -1.19
KTN1-222ENST00000555506 C1orf216Q8TAB5 229 aa7.6□□□□□ -1.19
KTN1-222ENST00000555506 ZNF232Q9UNY5 417 aa7.6□□□□□ -1.19
KTN1-222ENST00000555506 EML1O00423 815 aa7.59□□□□□ -1.19
KTN1-222ENST00000555506 PSMA6P60900 246 aaKnown RBP7.59□□□□□ -1.19
KTN1-222ENST00000555506 LBRQ14739 615 aaKnown RBP7.59□□□□□ -1.19
KTN1-222ENST00000555506 EFHC2Q5JST6 749 aa7.59□□□□□ -1.19
KTN1-222ENST00000555506 SND1Q7KZF4 910 aaKnown RBP eCLIP7.59□□□□□ -1.19
KTN1-222ENST00000555506 TXNDC2Q86VQ3 553 aa7.59□□□□□ -1.19
KTN1-222ENST00000555506 CCER1Q8TC90 406 aaPredicted RBP7.59□□□□□ -1.19
KTN1-222ENST00000555506 ZIC5Q96T25 663 aa7.59□□□□□ -1.19
KTN1-222ENST00000555506 A0A1W2PNR3 127 aa7.58□□□□□ -1.2
KTN1-222ENST00000555506 SERTM1A2A2V5 107 aa7.58□□□□□ -1.2
KTN1-222ENST00000555506 TATP17735 454 aaPredicted RBP7.58□□□□□ -1.2
KTN1-222ENST00000555506 POTEAQ6S8J7 498 aa7.58□□□□□ -1.2
KTN1-222ENST00000555506 GAS2L2Q8NHY3 880 aa7.58□□□□□ -1.2
KTN1-222ENST00000555506 KLRG1Q96E93 195 aa7.58□□□□□ -1.2
KTN1-222ENST00000555506 TRERF1Q96PN7 1200 aa7.58□□□□□ -1.2
KTN1-222ENST00000555506 HINFPQ9BQA5 517 aa7.58□□□□□ -1.2
KTN1-222ENST00000555506 ATAD2Q6PL18 1390 aa7.57□□□□□ -1.2
KTN1-222ENST00000555506 ATP2B4P23634 1241 aa7.57□□□□□ -1.2
KTN1-222ENST00000555506 ARID4AP29374 1257 aaPredicted RBP7.57□□□□□ -1.2
KTN1-222ENST00000555506 ARSJQ5FYB0 599 aaPredicted RBP7.57□□□□□ -1.2
KTN1-222ENST00000555506 C7orf43Q8WVR3 580 aa7.57□□□□□ -1.2
KTN1-222ENST00000555506 SCG3Q8WXD2 468 aaKnown RBP7.57□□□□□ -1.2
KTN1-222ENST00000555506 CFHR5Q9BXR6 569 aa7.57□□□□□ -1.2
KTN1-222ENST00000555506 ZCCHC2Q9C0B9 1178 aaKnown RBP7.57□□□□□ -1.2
KTN1-222ENST00000555506 MBIPQ9NS73 344 aa7.57□□□□□ -1.2
KTN1-222ENST00000555506 NDFIP2Q9NV92 336 aa7.57□□□□□ -1.2
KTN1-222ENST00000555506 MTMR7Q9Y216 660 aa7.57□□□□□ -1.2
KTN1-222ENST00000555506 SCO2A0A1W2PP80 73 aa7.56□□□□□ -1.2
KTN1-222ENST00000555506 KRBA1A5PL33 1030 aa7.56□□□□□ -1.2
KTN1-222ENST00000555506 PPP1R12BO60237 982 aaPredicted RBP7.56□□□□□ -1.2
KTN1-222ENST00000555506 BNIP3LO60238 219 aa7.56□□□□□ -1.2
KTN1-222ENST00000555506 CCDC27Q2M243 656 aa7.56□□□□□ -1.2
KTN1-222ENST00000555506 ABHD17AQ96GS6 310 aa7.56□□□□□ -1.2
KTN1-222ENST00000555506 LRRC4BQ9NT99 713 aa7.56□□□□□ -1.2
KTN1-222ENST00000555506 HCN2Q9UL51 889 aa7.56□□□□□ -1.2
KTN1-222ENST00000555506 HCN4Q9Y3Q4 1203 aa7.56□□□□□ -1.2
KTN1-222ENST00000555506 IGF1RP08069 1367 aa7.56□□□□□ -1.2
KTN1-222ENST00000555506 HIRAP54198 1017 aaPredicted RBP7.55□□□□□ -1.2
KTN1-222ENST00000555506 NLRP8Q86W28 1048 aa7.55□□□□□ -1.2
KTN1-222ENST00000555506 CHMP7Q8WUX9 453 aaPredicted RBP7.55□□□□□ -1.2
KTN1-222ENST00000555506 C2orf49Q9BVC5 232 aaPredicted RBP7.55□□□□□ -1.2
KTN1-222ENST00000555506 MX2P20592 715 aa7.55□□□□□ -1.2
KTN1-222ENST00000555506 BICDL1Q6ZP65 573 aa7.55□□□□□ -1.2
KTN1-222ENST00000555506 COBLO75128 1261 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms