RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 WWC1Q8IX03 1113 aa17.84■□□□□ 0.45
SNX6-203ENST00000555416 FAM9BQ8IZU0 186 aa17.84■□□□□ 0.45
SNX6-203ENST00000555416 IFT57Q9NWB7 429 aa17.84■□□□□ 0.45
SNX6-203ENST00000555416 CLEC4GQ6UXB4 293 aa17.83■□□□□ 0.44
SNX6-203ENST00000555416 SETDB2Q96T68 719 aa17.83■□□□□ 0.44
SNX6-203ENST00000555416 SALL2Q9Y467 1007 aaPredicted RBP17.83■□□□□ 0.44
SNX6-203ENST00000555416 ANKRD31Q8N7Z5 1873 aa17.83■□□□□ 0.44
SNX6-203ENST00000555416 ERBB4Q15303 1308 aa17.82■□□□□ 0.44
SNX6-203ENST00000555416 MAP3K15Q6ZN16 1313 aa17.82■□□□□ 0.44
SNX6-203ENST00000555416 GRIN3BO60391 1043 aa17.82■□□□□ 0.44
SNX6-203ENST00000555416 DUSP27Q5VZP5 1158 aa17.82■□□□□ 0.44
SNX6-203ENST00000555416 ZBTB3Q9H5J0 574 aa17.82■□□□□ 0.44
SNX6-203ENST00000555416 BCS1LQ9Y276 419 aa17.82■□□□□ 0.44
SNX6-203ENST00000555416 CHD4Q14839 1912 aa17.82■□□□□ 0.44
SNX6-203ENST00000555416 GNAI1P63096 354 aa17.81■□□□□ 0.44
SNX6-203ENST00000555416 CCDC27Q2M243 656 aa17.81■□□□□ 0.44
SNX6-203ENST00000555416 ELL2O00472 640 aaPredicted RBP17.8■□□□□ 0.44
SNX6-203ENST00000555416 C8orf58Q8NAV2 365 aa17.8■□□□□ 0.44
SNX6-203ENST00000555416 TSR2Q969E8 191 aaKnown RBP17.8■□□□□ 0.44
SNX6-203ENST00000555416 CHPF2Q9P2E5 772 aa17.8■□□□□ 0.44
SNX6-203ENST00000555416 NIP7Q9Y221 180 aaKnown RBP eCLIP17.8■□□□□ 0.44
SNX6-203ENST00000555416 ZNF652Q9Y2D9 606 aa17.8■□□□□ 0.44
SNX6-203ENST00000555416 NUP98P52948 1817 aa17.79■□□□□ 0.44
SNX6-203ENST00000555416 FAM177BA6PVY3 158 aa17.79■□□□□ 0.44
SNX6-203ENST00000555416 ERVV-1B6SEH8 477 aa17.79■□□□□ 0.44
SNX6-203ENST00000555416 RGL2O15211 777 aa17.79■□□□□ 0.44
SNX6-203ENST00000555416 CALD1Q05682 793 aaKnown RBP17.79■□□□□ 0.44
SNX6-203ENST00000555416 HDGFL1Q5TGJ6 251 aa17.79■□□□□ 0.44
SNX6-203ENST00000555416 TSPYL6Q8N831 410 aa17.79■□□□□ 0.44
SNX6-203ENST00000555416 DDX21Q9NR30 783 aaKnown RBP eCLIP17.79■□□□□ 0.44
SNX6-203ENST00000555416 PIM2Q9P1W9 311 aa17.79■□□□□ 0.44
SNX6-203ENST00000555416 COL11A2P13942 1736 aaPredicted RBP17.78■□□□□ 0.44
SNX6-203ENST00000555416 AIMP1Q12904 312 aaKnown RBP17.78■□□□□ 0.44
SNX6-203ENST00000555416 KIF6Q6ZMV9 814 aa17.78■□□□□ 0.44
SNX6-203ENST00000555416 COPS6Q7L5N1 327 aa17.78■□□□□ 0.44
SNX6-203ENST00000555416 C2CD5Q86YS7 1000 aa17.78■□□□□ 0.44
SNX6-203ENST00000555416 CNBD1Q8NA66 436 aa17.78■□□□□ 0.44
SNX6-203ENST00000555416 XAGE3Q8WTP9 111 aa17.78■□□□□ 0.44
SNX6-203ENST00000555416 UBN2Q6ZU65 1347 aa17.77■□□□□ 0.44
SNX6-203ENST00000555416 DLEC1Q9Y238 1755 aa17.77■□□□□ 0.44
SNX6-203ENST00000555416 HOXB7P09629 217 aa17.77■□□□□ 0.44
SNX6-203ENST00000555416 GPTP24298 496 aa17.77■□□□□ 0.44
SNX6-203ENST00000555416 NBPF5PQ86XG9 351 aaPredicted RBP17.77■□□□□ 0.44
SNX6-203ENST00000555416 BRIP1Q9BX63 1249 aa17.77■□□□□ 0.44
SNX6-203ENST00000555416 ATP10DQ9P241 1426 aa17.77■□□□□ 0.44
SNX6-203ENST00000555416 DALRD3Q5D0E6 543 aaKnown RBP17.76■□□□□ 0.43
SNX6-203ENST00000555416 GIGYF2Q6Y7W6 1299 aaKnown RBP17.76■□□□□ 0.43
SNX6-203ENST00000555416 SPINK5Q9NQ38 1064 aaPredicted RBP17.76■□□□□ 0.43
SNX6-203ENST00000555416 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
SNX6-203ENST00000555416 SUSD4Q5VX71 490 aa17.75■□□□□ 0.43
SNX6-203ENST00000555416 ZNF34Q8IZ26 560 aa17.75■□□□□ 0.43
SNX6-203ENST00000555416 ZNF784Q8NCA9 323 aaPredicted RBP17.75■□□□□ 0.43
SNX6-203ENST00000555416 ARFGEF1Q9Y6D6 1849 aa17.75■□□□□ 0.43
SNX6-203ENST00000555416 H0YIN7 160 aa17.74■□□□□ 0.43
SNX6-203ENST00000555416 ARHGAP27Q6ZUM4 889 aa17.74■□□□□ 0.43
SNX6-203ENST00000555416 NUTM1Q86Y26 1132 aa17.74■□□□□ 0.43
SNX6-203ENST00000555416 ABCC12Q96J65 1359 aa17.74■□□□□ 0.43
SNX6-203ENST00000555416 IL16Q14005 1332 aa17.73■□□□□ 0.43
SNX6-203ENST00000555416 NPHP1O15259 732 aa17.73■□□□□ 0.43
SNX6-203ENST00000555416 PDE6BP35913 854 aa17.73■□□□□ 0.43
SNX6-203ENST00000555416 ST5P78524 1137 aa17.73■□□□□ 0.43
SNX6-203ENST00000555416 DBF4Q9UBU7 674 aaPredicted RBP17.73■□□□□ 0.43
SNX6-203ENST00000555416 TNRC6CQ9HCJ0 1690 aaKnown RBP17.72■□□□□ 0.43
SNX6-203ENST00000555416 SRGNP10124 158 aa17.72■□□□□ 0.43
SNX6-203ENST00000555416 ERFEQ4G0M1 354 aa17.72■□□□□ 0.43
SNX6-203ENST00000555416 TPTE2Q6XPS3 522 aa17.72■□□□□ 0.43
SNX6-203ENST00000555416 TTLL6Q8N841 843 aa17.72■□□□□ 0.43
SNX6-203ENST00000555416 ZNF622Q969S3 477 aaKnown RBP eCLIP17.72■□□□□ 0.434e-7■■□□□ 11.4
SNX6-203ENST00000555416 ZNF428Q96B54 188 aa17.72■□□□□ 0.43
SNX6-203ENST00000555416 PHAXQ9H814 394 aaKnown RBP17.72■□□□□ 0.43
SNX6-203ENST00000555416 FANCIQ9NVI1 1328 aa17.72■□□□□ 0.43
SNX6-203ENST00000555416 TCERG1O14776 1098 aaKnown RBP17.71■□□□□ 0.43
SNX6-203ENST00000555416 NTSR2O95665 410 aa17.71■□□□□ 0.43
SNX6-203ENST00000555416 ADCY9O60503 1353 aa17.7■□□□□ 0.42
SNX6-203ENST00000555416 KLRG2A4D1S0 409 aaPredicted RBP17.7■□□□□ 0.42
SNX6-203ENST00000555416 WDR63Q8IWG1 891 aa17.7■□□□□ 0.42
SNX6-203ENST00000555416 PRELPP51888 382 aa17.69■□□□□ 0.42
SNX6-203ENST00000555416 C3orf67Q6ZVT6 689 aa17.69■□□□□ 0.42
SNX6-203ENST00000555416 SYNE4Q8N205 404 aa17.69■□□□□ 0.42
SNX6-203ENST00000555416 PLBD2Q8NHP8 589 aa17.69■□□□□ 0.42
SNX6-203ENST00000555416 HYPKQ9NX55 129 aa17.69■□□□□ 0.42
SNX6-203ENST00000555416 ZNF219Q9P2Y4 722 aaPredicted RBP17.69■□□□□ 0.42
SNX6-203ENST00000555416 SLX4Q8IY92 1834 aa17.69■□□□□ 0.42
SNX6-203ENST00000555416 ZNF521Q96K83 1311 aa17.69■□□□□ 0.42
SNX6-203ENST00000555416 ANKRD36CQ5JPF3 1778 aa17.68■□□□□ 0.42
SNX6-203ENST00000555416 RASSF7Q02833 373 aa17.68■□□□□ 0.42
SNX6-203ENST00000555416 TCIRG1Q13488 830 aa17.68■□□□□ 0.42
SNX6-203ENST00000555416 TWISTNBQ3B726 338 aaPredicted RBP17.68■□□□□ 0.42
SNX6-203ENST00000555416 STYK1Q6J9G0 422 aa17.68■□□□□ 0.42
SNX6-203ENST00000555416 ANKRD13DQ6ZTN6 518 aa17.68■□□□□ 0.42
SNX6-203ENST00000555416 NLRP10Q86W26 655 aa17.68■□□□□ 0.42
SNX6-203ENST00000555416 IBTKQ9P2D0 1353 aaPredicted RBP17.67■□□□□ 0.42
SNX6-203ENST00000555416 CCER2I3L3R5 266 aa17.67■□□□□ 0.42
SNX6-203ENST00000555416 GTF2E1P29083 439 aaPredicted RBP17.67■□□□□ 0.42
SNX6-203ENST00000555416 PARP10Q53GL7 1025 aa17.67■□□□□ 0.42
SNX6-203ENST00000555416 MASTLQ96GX5 879 aa17.67■□□□□ 0.42
SNX6-203ENST00000555416 NYXQ9GZU5 481 aa17.67■□□□□ 0.42
SNX6-203ENST00000555416 PDZRN3Q9UPQ7 1066 aa17.67■□□□□ 0.42
SNX6-203ENST00000555416 CACNA1SQ13698 1873 aa17.67■□□□□ 0.42
SNX6-203ENST00000555416 ATP5J2-PTCD1G3V325 749 aa17.66■□□□□ 0.42
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