RNA–Protein interactions for RNA: ENST00000555295.1

PABPN1-205, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-205ENST00000555295 TPTE2Q6XPS3 522 aa16.9■□□□□ 0.3
PABPN1-205ENST00000555295 KIF6Q6ZMV9 814 aa16.9■□□□□ 0.3
PABPN1-205ENST00000555295 NIP7Q9Y221 180 aaKnown RBP eCLIP16.9■□□□□ 0.3
PABPN1-205ENST00000555295 KDM3BQ7LBC6 1761 aa16.89■□□□□ 0.3
PABPN1-205ENST00000555295 NBPF26B4DH59 902 aa16.89■□□□□ 0.29
PABPN1-205ENST00000555295 GTF2E1P29083 439 aaPredicted RBP16.89■□□□□ 0.29
PABPN1-205ENST00000555295 RIPK4P57078 832 aa16.89■□□□□ 0.29
PABPN1-205ENST00000555295 RASSF7Q02833 373 aa16.89■□□□□ 0.29
PABPN1-205ENST00000555295 STYK1Q6J9G0 422 aa16.89■□□□□ 0.29
PABPN1-205ENST00000555295 NBPF10Q6P3W6 841 aaKnown RBP16.89■□□□□ 0.29
PABPN1-205ENST00000555295 CCDC24Q8N4L8 307 aa16.89■□□□□ 0.29
PABPN1-205ENST00000555295 NBPF15Q8N660 670 aa16.89■□□□□ 0.29
PABPN1-205ENST00000555295 MASTLQ96GX5 879 aa16.89■□□□□ 0.29
PABPN1-205ENST00000555295 THUMPD2Q9BTF0 503 aaKnown RBP16.89■□□□□ 0.29
PABPN1-205ENST00000555295 NMRK2Q9NPI5 230 aa16.89■□□□□ 0.29
PABPN1-205ENST00000555295 TSPYL4Q9UJ04 414 aa16.89■□□□□ 0.29
PABPN1-205ENST00000555295 EIF4A1P60842 406 aaKnown RBP16.88■□□□□ 0.29
PABPN1-205ENST00000555295 ANKRD31Q8N7Z5 1873 aa16.88■□□□□ 0.29
PABPN1-205ENST00000555295 C21orf2O43822 256 aa16.87■□□□□ 0.29
PABPN1-205ENST00000555295 NGEFQ8N5V2 710 aa16.87■□□□□ 0.29
PABPN1-205ENST00000555295 BABAM1Q9NWV8 329 aa16.87■□□□□ 0.29
PABPN1-205ENST00000555295 ZNF219Q9P2Y4 722 aaPredicted RBP16.87■□□□□ 0.29
PABPN1-205ENST00000555295 RRP7AQ9Y3A4 280 aaKnown RBP16.87■□□□□ 0.29
PABPN1-205ENST00000555295 ERBB4Q15303 1308 aa16.87■□□□□ 0.29
PABPN1-205ENST00000555295 ERVV-1B6SEH8 477 aa16.86■□□□□ 0.29
PABPN1-205ENST00000555295 SRGNP10124 158 aa16.86■□□□□ 0.29
PABPN1-205ENST00000555295 RBM46Q8TBY0 533 aaKnown RBP16.86■□□□□ 0.29
PABPN1-205ENST00000555295 NYXQ9GZU5 481 aa16.86■□□□□ 0.29
PABPN1-205ENST00000555295 TNRC6CQ9HCJ0 1690 aaKnown RBP16.85■□□□□ 0.29
PABPN1-205ENST00000555295 COL11A2P13942 1736 aaPredicted RBP16.85■□□□□ 0.29
PABPN1-205ENST00000555295 MYL6BP14649 208 aa16.85■□□□□ 0.29
PABPN1-205ENST00000555295 NPR1P16066 1061 aa16.85■□□□□ 0.29
PABPN1-205ENST00000555295 TMPOP42166 694 aaKnown RBP16.85■□□□□ 0.29
PABPN1-205ENST00000555295 APLP1P51693 650 aa16.85■□□□□ 0.29
PABPN1-205ENST00000555295 PRPF40BQ6NWY9 871 aaKnown RBP16.85■□□□□ 0.29
PABPN1-205ENST00000555295 TAOK3Q9H2K8 898 aa16.85■□□□□ 0.29
PABPN1-205ENST00000555295 SBF1O95248 1867 aa16.84■□□□□ 0.29
PABPN1-205ENST00000555295 FAM177BA6PVY3 158 aa16.84■□□□□ 0.29
PABPN1-205ENST00000555295 NFKBIEO00221 500 aa16.84■□□□□ 0.29
PABPN1-205ENST00000555295 DPY19L2Q6NUT2 758 aa16.84■□□□□ 0.29
PABPN1-205ENST00000555295 MAP3K15Q6ZN16 1313 aa16.84■□□□□ 0.29
PABPN1-205ENST00000555295 GLTPD2A6NH11 291 aa16.83■□□□□ 0.28
PABPN1-205ENST00000555295 FSTL1Q12841 308 aa16.83■□□□□ 0.28
PABPN1-205ENST00000555295 RUNDC1Q96C34 613 aa16.83■□□□□ 0.28
PABPN1-205ENST00000555295 RRAGCQ9HB90 399 aa16.83■□□□□ 0.28
PABPN1-205ENST00000555295 LTBP3Q9NS15 1303 aa16.83■□□□□ 0.28
PABPN1-205ENST00000555295 NEUROD2Q15784 382 aa16.82■□□□□ 0.28
PABPN1-205ENST00000555295 HLFQ16534 295 aa16.82■□□□□ 0.28
PABPN1-205ENST00000555295 ERFEQ4G0M1 354 aa16.82■□□□□ 0.28
PABPN1-205ENST00000555295 CCDC93Q567U6 631 aa16.82■□□□□ 0.28
PABPN1-205ENST00000555295 DIEXFQ68CQ4 756 aaKnown RBP16.82■□□□□ 0.28
PABPN1-205ENST00000555295 CCDC146Q8IYE0 955 aa16.82■□□□□ 0.28
PABPN1-205ENST00000555295 TIAM2Q8IVF5 1701 aa16.82■□□□□ 0.28
PABPN1-205ENST00000555295 VEGFAP15692 232 aaPredicted RBP16.81■□□□□ 0.28
PABPN1-205ENST00000555295 ALDH1B1P30837 517 aa16.81■□□□□ 0.28
PABPN1-205ENST00000555295 ZBTB3Q9H5J0 574 aa16.81■□□□□ 0.28
PABPN1-205ENST00000555295 IBTKQ9P2D0 1353 aaPredicted RBP16.8■□□□□ 0.28
PABPN1-205ENST00000555295 ARFGEF2Q9Y6D5 1785 aa16.8■□□□□ 0.28
PABPN1-205ENST00000555295 EIF2S2P20042 333 aaKnown RBP16.8■□□□□ 0.28
PABPN1-205ENST00000555295 SMC1BQ8NDV3 1235 aa16.8■□□□□ 0.28
PABPN1-205ENST00000555295 KLRG2A4D1S0 409 aaPredicted RBP16.79■□□□□ 0.28
PABPN1-205ENST00000555295 TTLL7Q6ZT98 887 aa16.79■□□□□ 0.28
PABPN1-205ENST00000555295 PPP1R42Q7Z4L9 355 aa16.79■□□□□ 0.28
PABPN1-205ENST00000555295 RTKN2Q8IZC4 609 aa16.79■□□□□ 0.28
PABPN1-205ENST00000555295 RPGRQ92834 1020 aaKnown RBP16.79■□□□□ 0.28
PABPN1-205ENST00000555295 LAS1LQ9Y4W2 734 aaKnown RBP16.79■□□□□ 0.28
PABPN1-205ENST00000555295 GPTP24298 496 aa16.78■□□□□ 0.28
PABPN1-205ENST00000555295 PRELPP51888 382 aa16.78■□□□□ 0.28
PABPN1-205ENST00000555295 PARP10Q53GL7 1025 aa16.78■□□□□ 0.28
PABPN1-205ENST00000555295 GIGYF2Q6Y7W6 1299 aaKnown RBP16.78■□□□□ 0.28
PABPN1-205ENST00000555295 PRKRIP1Q9H875 184 aaPredicted RBP16.78■□□□□ 0.28
PABPN1-205ENST00000555295 CACNA1SQ13698 1873 aa16.78■□□□□ 0.28
PABPN1-205ENST00000555295 FER1L6Q2WGJ9 1857 aa16.78■□□□□ 0.28
PABPN1-205ENST00000555295 NUTM1Q86Y26 1132 aa16.77■□□□□ 0.28
PABPN1-205ENST00000555295 SLX4Q8IY92 1834 aa16.77■□□□□ 0.27
PABPN1-205ENST00000555295 NUP98P52948 1817 aa16.76■□□□□ 0.27
PABPN1-205ENST00000555295 HSP90AB3PQ58FF7 597 aa16.76■□□□□ 0.27
PABPN1-205ENST00000555295 TMX4Q9H1E5 349 aaPredicted RBP16.76■□□□□ 0.27
PABPN1-205ENST00000555295 ADAMTS8Q9UP79 889 aa16.76■□□□□ 0.27
PABPN1-205ENST00000555295 RIC1Q4ADV7 1423 aa16.76■□□□□ 0.27
PABPN1-205ENST00000555295 CCDC88AQ3V6T2 1871 aa16.76■□□□□ 0.27
PABPN1-205ENST00000555295 FKBP4Q02790 459 aaKnown RBP eCLIP16.75■□□□□ 0.27
PABPN1-205ENST00000555295 CALD1Q05682 793 aaKnown RBP16.75■□□□□ 0.27
PABPN1-205ENST00000555295 CC2D2BQ6DHV5 1058 aa16.75■□□□□ 0.27
PABPN1-205ENST00000555295 ABCC12Q96J65 1359 aa16.75■□□□□ 0.27
PABPN1-205ENST00000555295 CHL1O00533 1208 aa16.74■□□□□ 0.27
PABPN1-205ENST00000555295 HOXB7P09629 217 aa16.74■□□□□ 0.27
PABPN1-205ENST00000555295 CRY2Q49AN0 593 aa16.74■□□□□ 0.27
PABPN1-205ENST00000555295 GRIPAP1Q4V328 841 aa16.74■□□□□ 0.27
PABPN1-205ENST00000555295 SUSD4Q5VX71 490 aa16.74■□□□□ 0.27
PABPN1-205ENST00000555295 ZNF34Q8IZ26 560 aa16.74■□□□□ 0.27
PABPN1-205ENST00000555295 C7orf43Q8WVR3 580 aa16.74■□□□□ 0.27
PABPN1-205ENST00000555295 RBM17Q96I25 401 aaKnown RBP16.74■□□□□ 0.27
PABPN1-205ENST00000555295 UTP14AQ9BVJ6 771 aaKnown RBP16.74■□□□□ 0.27
PABPN1-205ENST00000555295 DICER1Q9UPY3 1922 aaKnown RBP16.74■□□□□ 0.27
PABPN1-205ENST00000555295 RNF123Q5XPI4 1314 aa16.73■□□□□ 0.27
PABPN1-205ENST00000555295 UBN2Q6ZU65 1347 aa16.73■□□□□ 0.27
PABPN1-205ENST00000555295 IQCA1LA6NCM1 817 aa16.73■□□□□ 0.27
PABPN1-205ENST00000555295 NECTIN2Q92692 538 aa16.73■□□□□ 0.27
PABPN1-205ENST00000555295 NLRP3Q96P20 1036 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms