RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 NOD1Q9Y239 953 aa6.36□□□□□ -1.39
CPSF2-204ENST00000555244 STRCQ7RTU9 1775 aa6.36□□□□□ -1.39
CPSF2-204ENST00000555244 CLTCQ00610 1675 aaKnown RBP6.36□□□□□ -1.39
CPSF2-204ENST00000555244 MROH1Q8NDA8 1641 aa6.36□□□□□ -1.39
CPSF2-204ENST00000555244 ANKRD30AQ9BXX3 1397 aa6.35□□□□□ -1.39
CPSF2-204ENST00000555244 KIF15Q9NS87 1388 aa6.35□□□□□ -1.39
CPSF2-204ENST00000555244 TERTO14746 1132 aaKnown RBP6.35□□□□□ -1.39
CPSF2-204ENST00000555244 ATP1A2P50993 1020 aa6.35□□□□□ -1.39
CPSF2-204ENST00000555244 RAB15P59190 212 aa6.35□□□□□ -1.39
CPSF2-204ENST00000555244 NFX1Q12986 1120 aaKnown RBP6.35□□□□□ -1.39
CPSF2-204ENST00000555244 NR5A1Q13285 461 aa6.35□□□□□ -1.39
CPSF2-204ENST00000555244 SCARF1Q14162 830 aa6.35□□□□□ -1.39
CPSF2-204ENST00000555244 CDCA8Q53HL2 280 aa6.35□□□□□ -1.39
CPSF2-204ENST00000555244 C6orf118Q5T5N4 469 aa6.35□□□□□ -1.39
CPSF2-204ENST00000555244 LARP1Q6PKG0 1096 aaKnown RBP6.35□□□□□ -1.39
CPSF2-204ENST00000555244 RETREG2Q8NC44 543 aa6.35□□□□□ -1.39
CPSF2-204ENST00000555244 CCDC85AQ96PX6 553 aaPredicted RBP6.35□□□□□ -1.39
CPSF2-204ENST00000555244 KLF16Q9BXK1 252 aaPredicted RBP6.35□□□□□ -1.39
CPSF2-204ENST00000555244 PCDHB11Q9Y5F2 797 aa6.35□□□□□ -1.39
CPSF2-204ENST00000555244 CROCC2H7BZ55 1655 aa6.35□□□□□ -1.39
CPSF2-204ENST00000555244 ABCC3O15438 1527 aa6.35□□□□□ -1.39
CPSF2-204ENST00000555244 A2ML1A8K2U0 1454 aa6.34□□□□□ -1.39
CPSF2-204ENST00000555244 ROCK1Q13464 1354 aa6.34□□□□□ -1.39
CPSF2-204ENST00000555244 ZNF142P52746 1687 aaPredicted RBP6.34□□□□□ -1.39
CPSF2-204ENST00000555244 ZC3H13Q5T200 1668 aaKnown RBP6.34□□□□□ -1.39
CPSF2-204ENST00000555244 FAM196BA6NMK8 535 aa6.34□□□□□ -1.39
CPSF2-204ENST00000555244 SOBPA7XYQ1 873 aa6.34□□□□□ -1.39
CPSF2-204ENST00000555244 MYCP01106 439 aaPredicted RBP6.34□□□□□ -1.39
CPSF2-204ENST00000555244 RASA1P20936 1047 aa6.34□□□□□ -1.39
CPSF2-204ENST00000555244 VEGFBP49765 207 aa6.34□□□□□ -1.39
CPSF2-204ENST00000555244 INTS6LQ5JSJ4 861 aaKnown RBP6.34□□□□□ -1.39
CPSF2-204ENST00000555244 LCE2AQ5TA79 106 aaPredicted RBP6.34□□□□□ -1.39
CPSF2-204ENST00000555244 VWDEQ8N2E2 1590 aa6.34□□□□□ -1.39
CPSF2-204ENST00000555244 PRDM15P57071 1507 aaPredicted RBP6.34□□□□□ -1.39
CPSF2-204ENST00000555244 LMTK2Q8IWU2 1503 aa6.34□□□□□ -1.39
CPSF2-204ENST00000555244 NLRP1Q9C000 1473 aa6.34□□□□□ -1.4
CPSF2-204ENST00000555244 TNRQ92752 1358 aa6.33□□□□□ -1.4
CPSF2-204ENST00000555244 DEPDC5O75140 1603 aa6.33□□□□□ -1.4
CPSF2-204ENST00000555244 SPATA31D1Q6ZQQ2 1576 aa6.33□□□□□ -1.4
CPSF2-204ENST00000555244 ELOAQ14241 798 aaKnown RBP6.33□□□□□ -1.4
CPSF2-204ENST00000555244 TSGA10IPQ3SY00 556 aa6.33□□□□□ -1.4
CPSF2-204ENST00000555244 FBXO41Q8TF61 875 aa6.33□□□□□ -1.4
CPSF2-204ENST00000555244 USTQ9Y2C2 406 aa6.33□□□□□ -1.4
CPSF2-204ENST00000555244 RBM19Q9Y4C8 960 aaKnown RBP6.33□□□□□ -1.4
CPSF2-204ENST00000555244 MYO3AQ8NEV4 1616 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 CEP170BQ9Y4F5 1589 aaPredicted RBP6.32□□□□□ -1.4
CPSF2-204ENST00000555244 USP17L15C9J2P7 530 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 USP17L10C9JJH3 530 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 USP17L13C9JLJ4 530 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 USP17L12C9JPN9 530 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 USP17L11C9JVI0 530 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 USP17L21D6R901 530 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 USP17L18D6R9N7 530 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 USP17L22D6RA61 530 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 USP17L17D6RBQ6 530 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 USP17L19D6RCP7 530 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 USP17L20D6RJB6 530 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 ERVH48-1M5A8F1 160 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 USP17L24Q0WX57 530 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 CCDC116Q8IYX3 515 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 OGFOD1Q8N543 542 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 TRAIPQ9BWF2 469 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 RRP7BPQ9NSQ0 103 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 CAMSAP1Q5T5Y3 1602 aa6.32□□□□□ -1.4
CPSF2-204ENST00000555244 MED14O60244 1454 aa6.31□□□□□ -1.4
CPSF2-204ENST00000555244 ERVK-7P63135 1459 aa6.31□□□□□ -1.4
CPSF2-204ENST00000555244 IQSEC2Q5JU85 1478 aa6.31□□□□□ -1.4
CPSF2-204ENST00000555244 UPP2O95045 317 aa6.31□□□□□ -1.4
CPSF2-204ENST00000555244 BMP2P12643 396 aa6.31□□□□□ -1.4
CPSF2-204ENST00000555244 THEMISQ8N1K5 641 aaPredicted RBP6.31□□□□□ -1.4
CPSF2-204ENST00000555244 LARGE2Q8N3Y3 721 aa6.31□□□□□ -1.4
CPSF2-204ENST00000555244 CDCA7Q9BWT1 371 aaPredicted RBP6.31□□□□□ -1.4
CPSF2-204ENST00000555244 DNAAF2Q9NVR5 837 aaKnown RBP6.31□□□□□ -1.4
CPSF2-204ENST00000555244 PGPEP1Q9NXJ5 209 aa6.31□□□□□ -1.4
CPSF2-204ENST00000555244 NXF1Q9UBU9 619 aaKnown RBP6.31□□□□□ -1.4
CPSF2-204ENST00000555244 NOVA2Q9UNW9 492 aaKnown RBP6.31□□□□□ -1.4
CPSF2-204ENST00000555244 RRBP1Q9P2E9 1410 aaKnown RBP6.31□□□□□ -1.4
CPSF2-204ENST00000555244 ANKRD50Q9ULJ7 1429 aa6.31□□□□□ -1.4
CPSF2-204ENST00000555244 LTBP4Q8N2S1 1624 aa6.3□□□□□ -1.4
CPSF2-204ENST00000555244 GTF2IP78347 998 aa6.3□□□□□ -1.4
CPSF2-204ENST00000555244 PSME1Q06323 249 aa6.3□□□□□ -1.4
CPSF2-204ENST00000555244 PTK7Q13308 1070 aa6.3□□□□□ -1.4
CPSF2-204ENST00000555244 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
CPSF2-204ENST00000555244 CC2D2BQ6DHV5 1058 aa6.3□□□□□ -1.4
CPSF2-204ENST00000555244 FAM200AQ8TCP9 573 aa6.3□□□□□ -1.4
CPSF2-204ENST00000555244 SLC16A10Q8TF71 515 aa6.3□□□□□ -1.4
CPSF2-204ENST00000555244 EMILIN1Q9Y6C2 1016 aa6.3□□□□□ -1.4
CPSF2-204ENST00000555244 NOS1P29475 1434 aa6.3□□□□□ -1.4
CPSF2-204ENST00000555244 RPRD2Q5VT52 1461 aaKnown RBP6.29□□□□□ -1.4
CPSF2-204ENST00000555244 MAN1A2O60476 641 aa6.29□□□□□ -1.4
CPSF2-204ENST00000555244 ERVK-9P63128 1117 aa6.29□□□□□ -1.4
CPSF2-204ENST00000555244 CRTC2Q53ET0 693 aaPredicted RBP6.29□□□□□ -1.4
CPSF2-204ENST00000555244 PPP1R26Q5T8A7 1209 aaPredicted RBP6.29□□□□□ -1.4
CPSF2-204ENST00000555244 ANKMY2Q8IV38 441 aa6.29□□□□□ -1.4
CPSF2-204ENST00000555244 LINC00528Q8N1L1 170 aa6.29□□□□□ -1.4
CPSF2-204ENST00000555244 KANK1Q14678 1352 aa6.29□□□□□ -1.4
CPSF2-204ENST00000555244 ARHGAP23Q9P227 1491 aa6.28□□□□□ -1.4
CPSF2-204ENST00000555244 UGGT1Q9NYU2 1555 aa6.28□□□□□ -1.4
CPSF2-204ENST00000555244 CLDN10P78369 228 aa6.28□□□□□ -1.4
CPSF2-204ENST00000555244 CBLBQ13191 982 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms