RNA–Protein interactions for RNA: ENST00000555233.5

PRKCH-214, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-214ENST00000555233 PRAMEF22A3QJZ6 481 aa8.15□□□□□ -1.1
PRKCH-214ENST00000555233 PPP1R37O75864 691 aa8.15□□□□□ -1.1
PRKCH-214ENST00000555233 KCNQ4P56696 695 aa8.15□□□□□ -1.1
PRKCH-214ENST00000555233 RIPK4P57078 832 aa8.15□□□□□ -1.1
PRKCH-214ENST00000555233 MYT1Q01538 1121 aa8.15□□□□□ -1.1
PRKCH-214ENST00000555233 EZH2Q15910 746 aaKnown RBP8.15□□□□□ -1.1
PRKCH-214ENST00000555233 KRT24Q2M2I5 525 aa8.15□□□□□ -1.1
PRKCH-214ENST00000555233 SPNS2Q8IVW8 549 aa8.15□□□□□ -1.1
PRKCH-214ENST00000555233 FAM9BQ8IZU0 186 aa8.15□□□□□ -1.1
PRKCH-214ENST00000555233 ZNF496Q96IT1 587 aaPredicted RBP8.15□□□□□ -1.1
PRKCH-214ENST00000555233 LRP5O75197 1615 aa8.14□□□□□ -1.11
PRKCH-214ENST00000555233 HSP90AB1P08238 724 aaKnown RBP8.14□□□□□ -1.11
PRKCH-214ENST00000555233 C7P10643 843 aa8.14□□□□□ -1.11
PRKCH-214ENST00000555233 PDIA4P13667 645 aaKnown RBP8.14□□□□□ -1.11
PRKCH-214ENST00000555233 PSEN1P49768 467 aa8.14□□□□□ -1.11
PRKCH-214ENST00000555233 EN1Q05925 392 aaPredicted RBP8.14□□□□□ -1.11
PRKCH-214ENST00000555233 ZNF827Q17R98 1081 aa8.14□□□□□ -1.11
PRKCH-214ENST00000555233 LINC00116Q8NCU8 138 aa8.14□□□□□ -1.11
PRKCH-214ENST00000555233 LAMB2P55268 1798 aa8.14□□□□□ -1.11
PRKCH-214ENST00000555233 IL16Q14005 1332 aa8.13□□□□□ -1.11
PRKCH-214ENST00000555233 MAPK8IP3Q9UPT6 1336 aa8.13□□□□□ -1.11
PRKCH-214ENST00000555233 EIF4A1P60842 406 aaKnown RBP8.13□□□□□ -1.11
PRKCH-214ENST00000555233 TXNRD1Q16881 649 aa8.13□□□□□ -1.11
PRKCH-214ENST00000555233 C1orf141Q5JVX7 400 aa8.13□□□□□ -1.11
PRKCH-214ENST00000555233 ZNF790Q6PG37 636 aa8.13□□□□□ -1.11
PRKCH-214ENST00000555233 SLC39A7Q92504 469 aa8.13□□□□□ -1.11
PRKCH-214ENST00000555233 LARP6Q9BRS8 491 aaKnown RBP8.13□□□□□ -1.11
PRKCH-214ENST00000555233 C1orf115Q9H7X2 142 aa8.13□□□□□ -1.11
PRKCH-214ENST00000555233 MIS18AQ9NYP9 233 aa8.13□□□□□ -1.11
PRKCH-214ENST00000555233 DLEC1Q9Y238 1755 aa8.12□□□□□ -1.11
PRKCH-214ENST00000555233 COL11A2P13942 1736 aaPredicted RBP8.12□□□□□ -1.11
PRKCH-214ENST00000555233 FANCIQ9NVI1 1328 aa8.12□□□□□ -1.11
PRKCH-214ENST00000555233 LOC102724428A0A0B4J2F2 783 aa8.12□□□□□ -1.11
PRKCH-214ENST00000555233 SIK1P57059 783 aa8.12□□□□□ -1.11
PRKCH-214ENST00000555233 PDE4DQ08499 809 aa8.12□□□□□ -1.11
PRKCH-214ENST00000555233 PDIA6Q15084 440 aa8.12□□□□□ -1.11
PRKCH-214ENST00000555233 CCDC125Q86Z20 511 aa8.12□□□□□ -1.11
PRKCH-214ENST00000555233 CDCA7LQ96GN5 454 aa8.12□□□□□ -1.11
PRKCH-214ENST00000555233 PDGFDQ9GZP0 370 aaPredicted RBP8.12□□□□□ -1.11
PRKCH-214ENST00000555233 MBIPQ9NS73 344 aa8.12□□□□□ -1.11
PRKCH-214ENST00000555233 TMOD3Q9NYL9 352 aa8.12□□□□□ -1.11
PRKCH-214ENST00000555233 PCDHB8Q9UN66 801 aa8.12□□□□□ -1.11
PRKCH-214ENST00000555233 ARIH1Q9Y4X5 557 aaPredicted RBP8.12□□□□□ -1.11
PRKCH-214ENST00000555233 PCDHB13Q9Y5F0 798 aa8.12□□□□□ -1.11
PRKCH-214ENST00000555233 DDX60Q8IY21 1712 aaKnown RBP8.12□□□□□ -1.11
PRKCH-214ENST00000555233 TNRC6CQ9HCJ0 1690 aaKnown RBP8.11□□□□□ -1.11
PRKCH-214ENST00000555233 NBPF26B4DH59 902 aa8.11□□□□□ -1.11
PRKCH-214ENST00000555233 APBB1O00213 710 aa8.11□□□□□ -1.11
PRKCH-214ENST00000555233 TRIM66O15016 1216 aa8.11□□□□□ -1.11
PRKCH-214ENST00000555233 APBA3O96018 575 aa8.11□□□□□ -1.11
PRKCH-214ENST00000555233 CYP19A1P11511 503 aaPredicted RBP8.11□□□□□ -1.11
PRKCH-214ENST00000555233 PDE4AP27815 886 aa8.11□□□□□ -1.11
PRKCH-214ENST00000555233 CABP4P57796 275 aa8.11□□□□□ -1.11
PRKCH-214ENST00000555233 MKRN3Q13064 507 aaKnown RBP8.11□□□□□ -1.11
PRKCH-214ENST00000555233 TAF7Q15545 349 aaPredicted RBP8.11□□□□□ -1.11
PRKCH-214ENST00000555233 NBPF14Q5TI25 921 aa8.11□□□□□ -1.11
PRKCH-214ENST00000555233 NBPF10Q6P3W6 841 aaKnown RBP8.11□□□□□ -1.11
PRKCH-214ENST00000555233 INTS5Q6P9B9 1019 aaKnown RBP8.11□□□□□ -1.11
PRKCH-214ENST00000555233 SMIM5Q71RC9 77 aa8.11□□□□□ -1.11
PRKCH-214ENST00000555233 DNAJC10Q8IXB1 793 aa8.11□□□□□ -1.11
PRKCH-214ENST00000555233 NBPF15Q8N660 670 aa8.11□□□□□ -1.11
PRKCH-214ENST00000555233 TSPYL6Q8N831 410 aa8.11□□□□□ -1.11
PRKCH-214ENST00000555233 IFT57Q9NWB7 429 aa8.11□□□□□ -1.11
PRKCH-214ENST00000555233 COL4A1P02462 1669 aa8.11□□□□□ -1.11
PRKCH-214ENST00000555233 ZBED9Q6R2W3 1325 aa8.1□□□□□ -1.11
PRKCH-214ENST00000555233 CNTNAP4Q9C0A0 1308 aa8.1□□□□□ -1.11
PRKCH-214ENST00000555233 GIGYF1O75420 1035 aaPredicted RBP8.1□□□□□ -1.11
PRKCH-214ENST00000555233 SLFN5Q08AF3 891 aa8.1□□□□□ -1.11
PRKCH-214ENST00000555233 FLIIQ13045 1269 aa8.1□□□□□ -1.11
PRKCH-214ENST00000555233 RBM26Q5T8P6 1007 aaKnown RBP8.1□□□□□ -1.11
PRKCH-214ENST00000555233 DUSP27Q5VZP5 1158 aa8.1□□□□□ -1.11
PRKCH-214ENST00000555233 WDR63Q8IWG1 891 aa8.1□□□□□ -1.11
PRKCH-214ENST00000555233 C8orf58Q8NAV2 365 aa8.1□□□□□ -1.11
PRKCH-214ENST00000555233 FBXO22Q8NEZ5 403 aa8.1□□□□□ -1.11
PRKCH-214ENST00000555233 TSR2Q969E8 191 aaKnown RBP8.1□□□□□ -1.11
PRKCH-214ENST00000555233 TSPYL2Q9H2G4 693 aaPredicted RBP8.1□□□□□ -1.11
PRKCH-214ENST00000555233 PNNQ9H307 717 aaKnown RBP8.1□□□□□ -1.11
PRKCH-214ENST00000555233 BABAM1Q9NWV8 329 aa8.1□□□□□ -1.11
PRKCH-214ENST00000555233 USP16Q9Y5T5 823 aa8.1□□□□□ -1.11
PRKCH-214ENST00000555233 SOS1Q07889 1333 aaPredicted RBP8.09□□□□□ -1.11
PRKCH-214ENST00000555233 PNPLA7Q6ZV29 1317 aa8.09□□□□□ -1.11
PRKCH-214ENST00000555233 MFSD10Q14728 455 aa8.09□□□□□ -1.11
PRKCH-214ENST00000555233 SLC27A3Q5K4L6 730 aa8.09□□□□□ -1.11
PRKCH-214ENST00000555233 NGEFQ8N5V2 710 aa8.09□□□□□ -1.11
PRKCH-214ENST00000555233 SYTL4Q96C24 671 aaPredicted RBP8.09□□□□□ -1.11
PRKCH-214ENST00000555233 DDX27Q96GQ7 796 aaKnown RBP8.09□□□□□ -1.11
PRKCH-214ENST00000555233 A0A1B0GUL6 1792 aa8.09□□□□□ -1.11
PRKCH-214ENST00000555233 MYH3P11055 1940 aa8.09□□□□□ -1.11
PRKCH-214ENST00000555233 BTBD11A6QL63 1104 aa8.08□□□□□ -1.12
PRKCH-214ENST00000555233 PTCD1O75127 700 aaKnown RBP8.08□□□□□ -1.12
PRKCH-214ENST00000555233 LMOD3Q0VAK6 560 aa8.08□□□□□ -1.12
PRKCH-214ENST00000555233 TEFQ10587 303 aa8.08□□□□□ -1.12
PRKCH-214ENST00000555233 PROSER3Q2NL68 480 aa8.08□□□□□ -1.12
PRKCH-214ENST00000555233 SMARCC1Q92922 1105 aaPredicted RBP8.08□□□□□ -1.12
PRKCH-214ENST00000555233 BCL2L12Q9HB09 334 aa8.08□□□□□ -1.12
PRKCH-214ENST00000555233 ZBTB1Q9Y2K1 713 aa8.08□□□□□ -1.12
PRKCH-214ENST00000555233 TAF1P21675 1872 aa8.07□□□□□ -1.12
PRKCH-214ENST00000555233 CRKLP46109 303 aaKnown RBP8.07□□□□□ -1.12
PRKCH-214ENST00000555233 BAG6P46379 1132 aa8.07□□□□□ -1.12
PRKCH-214ENST00000555233 RC3H1Q5TC82 1133 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms