RNA–Protein interactions for RNA: ENST00000555075.5

ACTN1-214, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 828 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-214ENST00000555075 XAGE3Q8WTP9 111 aa15.46■□□□□ 0.07
ACTN1-214ENST00000555075 SETDB2Q96T68 719 aa15.46■□□□□ 0.07
ACTN1-214ENST00000555075 ZBTB3Q9H5J0 574 aa15.46■□□□□ 0.07
ACTN1-214ENST00000555075 GTF2E1P29083 439 aaPredicted RBP15.45■□□□□ 0.06
ACTN1-214ENST00000555075 COPS6Q7L5N1 327 aa15.45■□□□□ 0.06
ACTN1-214ENST00000555075 CDCA7LQ96GN5 454 aa15.45■□□□□ 0.06
ACTN1-214ENST00000555075 YTHDC1Q96MU7 727 aaKnown RBP15.45■□□□□ 0.06
ACTN1-214ENST00000555075 SPINK5Q9NQ38 1064 aaPredicted RBP15.45■□□□□ 0.06
ACTN1-214ENST00000555075 CAMTA2O94983 1202 aa15.44■□□□□ 0.06
ACTN1-214ENST00000555075 CLEC4GQ6UXB4 293 aa15.44■□□□□ 0.06
ACTN1-214ENST00000555075 RIC3Q7Z5B4 369 aa15.44■□□□□ 0.06
ACTN1-214ENST00000555075 MYH14Q7Z406 1995 aaKnown RBP15.44■□□□□ 0.06
ACTN1-214ENST00000555075 ZBED9Q6R2W3 1325 aa15.43■□□□□ 0.06
ACTN1-214ENST00000555075 MAP3K15Q6ZN16 1313 aa15.43■□□□□ 0.06
ACTN1-214ENST00000555075 ERVV-1B6SEH8 477 aa15.43■□□□□ 0.06
ACTN1-214ENST00000555075 SLC4A2P04920 1241 aa15.43■□□□□ 0.06
ACTN1-214ENST00000555075 PROSER3Q2NL68 480 aa15.43■□□□□ 0.06
ACTN1-214ENST00000555075 HSP90AB3PQ58FF7 597 aa15.43■□□□□ 0.06
ACTN1-214ENST00000555075 TTLL7Q6ZT98 887 aa15.43■□□□□ 0.06
ACTN1-214ENST00000555075 NIP7Q9Y221 180 aaKnown RBP eCLIP15.43■□□□□ 0.06
ACTN1-214ENST00000555075 FAM177BA6PVY3 158 aa15.42■□□□□ 0.06
ACTN1-214ENST00000555075 VAMP4O75379 141 aa15.42■□□□□ 0.06
ACTN1-214ENST00000555075 PDIA6Q15084 440 aa15.42■□□□□ 0.06
ACTN1-214ENST00000555075 ST5P78524 1137 aa15.41■□□□□ 0.06
ACTN1-214ENST00000555075 NFIXQ14938 502 aa15.41■□□□□ 0.06
ACTN1-214ENST00000555075 TBC1D9BQ66K14 1250 aa15.41■□□□□ 0.06
ACTN1-214ENST00000555075 ANKRD13DQ6ZTN6 518 aa15.41■□□□□ 0.06
ACTN1-214ENST00000555075 NBPF5PQ86XG9 351 aaPredicted RBP15.41■□□□□ 0.06
ACTN1-214ENST00000555075 CARMIL3Q8ND23 1372 aa15.4■□□□□ 0.06
ACTN1-214ENST00000555075 RGL2O15211 777 aa15.4■□□□□ 0.06
ACTN1-214ENST00000555075 SERPINB2P05120 415 aa15.4■□□□□ 0.06
ACTN1-214ENST00000555075 GPTP24298 496 aa15.4■□□□□ 0.06
ACTN1-214ENST00000555075 NEXNQ0ZGT2 675 aa15.4■□□□□ 0.06
ACTN1-214ENST00000555075 GPR162Q16538 588 aa15.4■□□□□ 0.06
ACTN1-214ENST00000555075 PELP1Q8IZL8 1130 aaKnown RBP15.4■□□□□ 0.06
ACTN1-214ENST00000555075 NLGN2Q8NFZ4 835 aa15.4■□□□□ 0.06
ACTN1-214ENST00000555075 PLBD2Q8NHP8 589 aa15.4■□□□□ 0.06
ACTN1-214ENST00000555075 PHAXQ9H814 394 aaKnown RBP15.4■□□□□ 0.06
ACTN1-214ENST00000555075 C4AP0C0L4 1744 aa15.4■□□□□ 0.06
ACTN1-214ENST00000555075 CT47B1P0C2W7 299 aaPredicted RBP15.39■□□□□ 0.05
ACTN1-214ENST00000555075 FKBP5Q13451 457 aaPredicted RBP15.39■□□□□ 0.05
ACTN1-214ENST00000555075 HLFQ16534 295 aa15.39■□□□□ 0.05
ACTN1-214ENST00000555075 TPTE2Q6XPS3 522 aa15.39■□□□□ 0.05
ACTN1-214ENST00000555075 GIGYF2Q6Y7W6 1299 aaKnown RBP15.39■□□□□ 0.05
ACTN1-214ENST00000555075 PPP1R42Q7Z4L9 355 aa15.39■□□□□ 0.05
ACTN1-214ENST00000555075 CNBD1Q8NA66 436 aa15.39■□□□□ 0.05
ACTN1-214ENST00000555075 ZNF428Q96B54 188 aa15.39■□□□□ 0.05
ACTN1-214ENST00000555075 NYXQ9GZU5 481 aa15.39■□□□□ 0.05
ACTN1-214ENST00000555075 BCL2L12Q9HB09 334 aa15.39■□□□□ 0.05
ACTN1-214ENST00000555075 TM4SF1P30408 202 aa15.38■□□□□ 0.05
ACTN1-214ENST00000555075 SMC4Q9NTJ3 1288 aa15.38■□□□□ 0.05
ACTN1-214ENST00000555075 CD2APQ9Y5K6 639 aa15.38■□□□□ 0.05
ACTN1-214ENST00000555075 UTRNP46939 3433 aa15.37■□□□□ 0.05
ACTN1-214ENST00000555075 POLRMTO00411 1230 aaKnown RBP15.37■□□□□ 0.05
ACTN1-214ENST00000555075 DDR1Q08345 913 aa15.37■□□□□ 0.05
ACTN1-214ENST00000555075 FLIIQ13045 1269 aa15.37■□□□□ 0.05
ACTN1-214ENST00000555075 PARP10Q53GL7 1025 aa15.37■□□□□ 0.05
ACTN1-214ENST00000555075 SCN7AQ01118 1682 aa15.35■□□□□ 0.05
ACTN1-214ENST00000555075 TCIRG1Q13488 830 aa15.35■□□□□ 0.05
ACTN1-214ENST00000555075 KSR2Q6VAB6 950 aa15.35■□□□□ 0.05
ACTN1-214ENST00000555075 MYD88Q99836 296 aa15.35■□□□□ 0.05
ACTN1-214ENST00000555075 MAP3K2Q9Y2U5 619 aa15.35■□□□□ 0.05
ACTN1-214ENST00000555075 PI4KAP2A4QPH2 592 aa15.34■□□□□ 0.05
ACTN1-214ENST00000555075 PDE6BP35913 854 aa15.34■□□□□ 0.05
ACTN1-214ENST00000555075 ALDH1L2Q3SY69 923 aa15.34■□□□□ 0.05
ACTN1-214ENST00000555075 LRP10Q7Z4F1 713 aa15.34■□□□□ 0.05
ACTN1-214ENST00000555075 TRMT2AQ8IZ69 625 aaKnown RBP15.34■□□□□ 0.05
ACTN1-214ENST00000555075 PI4KAP1Q8N8J0 262 aa15.34■□□□□ 0.05
ACTN1-214ENST00000555075 UTP14AQ9BVJ6 771 aaKnown RBP15.34■□□□□ 0.05
ACTN1-214ENST00000555075 BCL2L13Q9BXK5 485 aa15.34■□□□□ 0.05
ACTN1-214ENST00000555075 ATP5J2-PTCD1G3V325 749 aa15.33■□□□□ 0.04
ACTN1-214ENST00000555075 TGFB2P61812 414 aa15.33■□□□□ 0.04
ACTN1-214ENST00000555075 G2E3Q7L622 706 aa15.33■□□□□ 0.04
ACTN1-214ENST00000555075 TRMT112Q9UI30 125 aaKnown RBP15.33■□□□□ 0.04
ACTN1-214ENST00000555075 ATP10DQ9P241 1426 aa15.33■□□□□ 0.04
ACTN1-214ENST00000555075 H0YIN7 160 aa15.32■□□□□ 0.04
ACTN1-214ENST00000555075 HSP90B1P14625 803 aaKnown RBP15.32■□□□□ 0.04
ACTN1-214ENST00000555075 PRR5LQ6MZQ0 368 aa15.32■□□□□ 0.04
ACTN1-214ENST00000555075 SLC4A10Q6U841 1118 aa15.32■□□□□ 0.04
ACTN1-214ENST00000555075 ZNF34Q8IZ26 560 aa15.32■□□□□ 0.04
ACTN1-214ENST00000555075 CCDC24Q8N4L8 307 aa15.32■□□□□ 0.04
ACTN1-214ENST00000555075 DNAAF4Q8WXU2 420 aa15.32■□□□□ 0.04
ACTN1-214ENST00000555075 SSH1Q8WYL5 1049 aa15.32■□□□□ 0.04
ACTN1-214ENST00000555075 METTL22Q9BUU2 404 aaPredicted RBP15.32■□□□□ 0.04
ACTN1-214ENST00000555075 PDZRN3Q9UPQ7 1066 aa15.32■□□□□ 0.04
ACTN1-214ENST00000555075 GOLGB1Q14789 3259 aaKnown RBP15.32■□□□□ 0.04
ACTN1-214ENST00000555075 BCORQ6W2J9 1755 aa15.31■□□□□ 0.04
ACTN1-214ENST00000555075 SUSD4Q5VX71 490 aa15.31■□□□□ 0.04
ACTN1-214ENST00000555075 NUTM1Q86Y26 1132 aa15.31■□□□□ 0.04
ACTN1-214ENST00000555075 C2CD5Q86YS7 1000 aa15.31■□□□□ 0.04
ACTN1-214ENST00000555075 MRPL50Q8N5N7 158 aaKnown RBP15.31■□□□□ 0.04
ACTN1-214ENST00000555075 BRIP1Q9BX63 1249 aa15.31■□□□□ 0.04
ACTN1-214ENST00000555075 CWC25Q9NXE8 425 aaPredicted RBP15.31■□□□□ 0.04
ACTN1-214ENST00000555075 CHD4Q14839 1912 aa15.31■□□□□ 0.04
ACTN1-214ENST00000555075 IPO8O15397 1037 aaKnown RBP15.3■□□□□ 0.04
ACTN1-214ENST00000555075 PTPRCP08575 1304 aa15.3■□□□□ 0.04
ACTN1-214ENST00000555075 YBX3P16989 372 aaKnown RBP eCLIP15.3■□□□□ 0.049e-8■■□□□ 11.7
ACTN1-214ENST00000555075 NLRP10Q86W26 655 aa15.3■□□□□ 0.04
ACTN1-214ENST00000555075 ZNF784Q8NCA9 323 aaPredicted RBP15.3■□□□□ 0.04
ACTN1-214ENST00000555075 FRAT1Q92837 279 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms