RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 ETFBKMTQ8IXQ9 262 aa8.66□□□□□ -1.02
PSEN1-211ENST00000554995 ITPKCQ96DU7 683 aa8.66□□□□□ -1.02
PSEN1-211ENST00000554995 AGBL1Q96MI9 1066 aa8.66□□□□□ -1.02
PSEN1-211ENST00000554995 NLRP3Q96P20 1036 aa8.66□□□□□ -1.02
PSEN1-211ENST00000554995 POLIQ9UNA4 740 aa8.66□□□□□ -1.02
PSEN1-211ENST00000554995 PARP3Q9Y6F1 533 aa8.66□□□□□ -1.02
PSEN1-211ENST00000554995 PPARGC1BQ86YN6 1023 aaKnown RBP8.65□□□□□ -1.02
PSEN1-211ENST00000554995 ALKBH8Q96BT7 664 aaKnown RBP8.65□□□□□ -1.02
PSEN1-211ENST00000554995 KLF16Q9BXK1 252 aaPredicted RBP8.65□□□□□ -1.02
PSEN1-211ENST00000554995 BACH2Q9BYV9 841 aa8.65□□□□□ -1.02
PSEN1-211ENST00000554995 PHACTR1Q9C0D0 580 aa8.65□□□□□ -1.02
PSEN1-211ENST00000554995 KLK14Q9P0G3 267 aa8.65□□□□□ -1.02
PSEN1-211ENST00000554995 PKD2L1Q9P0L9 805 aa8.65□□□□□ -1.02
PSEN1-211ENST00000554995 PRPF40AO75400 957 aaKnown RBP8.64□□□□□ -1.03
PSEN1-211ENST00000554995 ZIC2O95409 532 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-211ENST00000554995 AVPP01185 164 aa8.64□□□□□ -1.03
PSEN1-211ENST00000554995 RELBQ01201 579 aa8.64□□□□□ -1.03
PSEN1-211ENST00000554995 FOXC1Q12948 553 aa8.64□□□□□ -1.03
PSEN1-211ENST00000554995 GJD3Q8N144 294 aa8.64□□□□□ -1.03
PSEN1-211ENST00000554995 EDEM1Q92611 657 aa8.64□□□□□ -1.03
PSEN1-211ENST00000554995 ZSCAN10Q96SZ4 725 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-211ENST00000554995 ZFAND3Q9H8U3 227 aa8.64□□□□□ -1.03
PSEN1-211ENST00000554995 PARP2Q9UGN5 583 aa8.64□□□□□ -1.03
PSEN1-211ENST00000554995 FAM181BA6NEQ2 426 aa8.63□□□□□ -1.03
PSEN1-211ENST00000554995 MZF1P28698 734 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-211ENST00000554995 ZAP70P43403 619 aa8.63□□□□□ -1.03
PSEN1-211ENST00000554995 WDR4P57081 412 aaKnown RBP8.63□□□□□ -1.03
PSEN1-211ENST00000554995 FGD1P98174 961 aa8.63□□□□□ -1.03
PSEN1-211ENST00000554995 XPCQ01831 940 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-211ENST00000554995 DNM1Q05193 864 aaKnown RBP8.63□□□□□ -1.03
PSEN1-211ENST00000554995 IFT43Q96FT9 208 aa8.63□□□□□ -1.03
PSEN1-211ENST00000554995 FAM161BQ96MY7 647 aa8.63□□□□□ -1.03
PSEN1-211ENST00000554995 DUSP9Q99956 384 aaKnown RBP8.63□□□□□ -1.03
PSEN1-211ENST00000554995 NIFKQ9BYG3 293 aaKnown RBP8.63□□□□□ -1.03
PSEN1-211ENST00000554995 NIF3L1Q9GZT8 377 aa8.63□□□□□ -1.03
PSEN1-211ENST00000554995 ZNF395Q9H8N7 513 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-211ENST00000554995 WWC3Q9ULE0 1092 aa8.63□□□□□ -1.03
PSEN1-211ENST00000554995 PDGFAP04085 211 aa8.62□□□□□ -1.03
PSEN1-211ENST00000554995 TMEM214Q6NUQ4 689 aaKnown RBP8.62□□□□□ -1.03
PSEN1-211ENST00000554995 CYP4X1Q8N118 509 aa8.62□□□□□ -1.03
PSEN1-211ENST00000554995 SNIP1Q8TAD8 396 aaKnown RBP8.62□□□□□ -1.03
PSEN1-211ENST00000554995 C8orf37Q96NL8 207 aa8.62□□□□□ -1.03
PSEN1-211ENST00000554995 SETDB2Q96T68 719 aa8.62□□□□□ -1.03
PSEN1-211ENST00000554995 RNF19AQ9NV58 838 aa8.62□□□□□ -1.03
PSEN1-211ENST00000554995 TOR4AQ9NXH8 423 aa8.62□□□□□ -1.03
PSEN1-211ENST00000554995 J3QL48 77 aa8.61□□□□□ -1.03
PSEN1-211ENST00000554995 TERTO14746 1132 aaKnown RBP8.61□□□□□ -1.03
PSEN1-211ENST00000554995 TIMP2P16035 220 aa8.61□□□□□ -1.03
PSEN1-211ENST00000554995 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-211ENST00000554995 TXLNAP40222 546 aa8.61□□□□□ -1.03
PSEN1-211ENST00000554995 USP5P45974 858 aa8.61□□□□□ -1.03
PSEN1-211ENST00000554995 ATP2B2Q01814 1243 aa8.61□□□□□ -1.03
PSEN1-211ENST00000554995 LDLRAD1Q5T700 205 aa8.61□□□□□ -1.03
PSEN1-211ENST00000554995 RHBDD1Q8TEB9 315 aa8.61□□□□□ -1.03
PSEN1-211ENST00000554995 SHROOM4Q9ULL8 1493 aa8.61□□□□□ -1.03
PSEN1-211ENST00000554995 SCAMP3O14828 347 aaKnown RBP8.6□□□□□ -1.03
PSEN1-211ENST00000554995 GTF2E1P29083 439 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-211ENST00000554995 ENOX2Q16206 610 aaKnown RBP8.6□□□□□ -1.03
PSEN1-211ENST00000554995 C1orf53Q5VUE5 145 aa8.6□□□□□ -1.03
PSEN1-211ENST00000554995 TMC4Q7Z404 712 aa8.6□□□□□ -1.03
PSEN1-211ENST00000554995 MRS2Q9HD23 443 aa8.6□□□□□ -1.03
PSEN1-211ENST00000554995 PNMA6FA0A0J9YX94 578 aa8.59□□□□□ -1.03
PSEN1-211ENST00000554995 ZC3H6P61129 1189 aaKnown RBP8.59□□□□□ -1.03
PSEN1-211ENST00000554995 DAB2P98082 770 aa8.59□□□□□ -1.03
PSEN1-211ENST00000554995 TREML1Q86YW5 311 aa8.59□□□□□ -1.03
PSEN1-211ENST00000554995 TTC24A2A3L6 582 aaPredicted RBP8.58□□□□□ -1.04
PSEN1-211ENST00000554995 AXIN1O15169 862 aa8.58□□□□□ -1.04
PSEN1-211ENST00000554995 SORBS3O60504 671 aa8.58□□□□□ -1.04
PSEN1-211ENST00000554995 PLA2G4AP47712 749 aa8.58□□□□□ -1.04
PSEN1-211ENST00000554995 SMCPP49901 116 aaPredicted RBP8.58□□□□□ -1.04
PSEN1-211ENST00000554995 HDLBPQ00341 1268 aaKnown RBP8.58□□□□□ -1.04
PSEN1-211ENST00000554995 PSMD2Q13200 908 aa8.58□□□□□ -1.04
PSEN1-211ENST00000554995 CTC1Q2NKJ3 1217 aa8.58□□□□□ -1.04
PSEN1-211ENST00000554995 GNASQ5JWF2 1037 aa8.58□□□□□ -1.04
PSEN1-211ENST00000554995 GPR152Q8TDT2 470 aa8.58□□□□□ -1.04
PSEN1-211ENST00000554995 GRIP2Q9C0E4 1043 aa8.58□□□□□ -1.04
PSEN1-211ENST00000554995 ERCC5P28715 1186 aaPredicted RBP8.57□□□□□ -1.04
PSEN1-211ENST00000554995 GPC1P35052 558 aa8.57□□□□□ -1.04
PSEN1-211ENST00000554995 ALG1LQ6GMV1 187 aa8.57□□□□□ -1.04
PSEN1-211ENST00000554995 MEIOBQ8N635 442 aa8.57□□□□□ -1.04
PSEN1-211ENST00000554995 TMEM87AQ8NBN3 555 aa8.57□□□□□ -1.04
PSEN1-211ENST00000554995 NUDT16Q96DE0 195 aaKnown RBP8.57□□□□□ -1.04
PSEN1-211ENST00000554995 BCS1LQ9Y276 419 aa8.57□□□□□ -1.04
PSEN1-211ENST00000554995 PCSK2P16519 638 aa8.56□□□□□ -1.04
PSEN1-211ENST00000554995 ITGAEP38570 1179 aa8.56□□□□□ -1.04
PSEN1-211ENST00000554995 C4orf17Q53FE4 359 aa8.56□□□□□ -1.04
PSEN1-211ENST00000554995 SLC27A3Q5K4L6 730 aa8.56□□□□□ -1.04
PSEN1-211ENST00000554995 C9orf131Q5VYM1 1079 aa8.56□□□□□ -1.04
PSEN1-211ENST00000554995 GGNBP2Q9H3C7 697 aa8.56□□□□□ -1.04
PSEN1-211ENST00000554995 VTI1BQ9UEU0 232 aa8.56□□□□□ -1.04
PSEN1-211ENST00000554995 ORC1Q13415 861 aa8.55□□□□□ -1.04
PSEN1-211ENST00000554995 NAALADL2Q58DX5 795 aa8.55□□□□□ -1.04
PSEN1-211ENST00000554995 RHPN1Q8TCX5 695 aa8.55□□□□□ -1.04
PSEN1-211ENST00000554995 CSRNP1Q96S65 589 aa8.55□□□□□ -1.04
PSEN1-211ENST00000554995 CFHR5Q9BXR6 569 aa8.55□□□□□ -1.04
PSEN1-211ENST00000554995 A6NHS1 94 aa8.54□□□□□ -1.04
PSEN1-211ENST00000554995 TGFBR3LH3BV60 316 aa8.54□□□□□ -1.04
PSEN1-211ENST00000554995 MICAL2O94851 1124 aa8.54□□□□□ -1.04
PSEN1-211ENST00000554995 SMPD1P17405 629 aa8.54□□□□□ -1.04
PSEN1-211ENST00000554995 RNF144AP50876 292 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms