RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 USP16Q9Y5T5 823 aa20.15■□□□□ 0.82
XRCC3-210ENST00000554974 POTECB2RU33 542 aa20.14■□□□□ 0.81
XRCC3-210ENST00000554974 U2AF1L5P0DN76 240 aaPredicted RBP20.14■□□□□ 0.81
XRCC3-210ENST00000554974 U2AF1Q01081 240 aaKnown RBP eCLIP20.14■□□□□ 0.81
XRCC3-210ENST00000554974 ERFEQ4G0M1 354 aa20.14■□□□□ 0.81
XRCC3-210ENST00000554974 PRPF40BQ6NWY9 871 aaKnown RBP20.14■□□□□ 0.81
XRCC3-210ENST00000554974 PDZRN3Q9UPQ7 1066 aa20.14■□□□□ 0.81
XRCC3-210ENST00000554974 ST5P78524 1137 aa20.13■□□□□ 0.81
XRCC3-210ENST00000554974 TAOK3Q9H2K8 898 aa20.13■□□□□ 0.81
XRCC3-210ENST00000554974 LAMB4A4D0S4 1761 aa20.13■□□□□ 0.81
XRCC3-210ENST00000554974 SRGNP10124 158 aa20.12■□□□□ 0.81
XRCC3-210ENST00000554974 DCTN1Q14203 1278 aa20.12■□□□□ 0.81
XRCC3-210ENST00000554974 PPP2R1AP30153 589 aa20.11■□□□□ 0.81
XRCC3-210ENST00000554974 STYK1Q6J9G0 422 aa20.11■□□□□ 0.81
XRCC3-210ENST00000554974 NUDCQ9Y266 331 aa20.11■□□□□ 0.81
XRCC3-210ENST00000554974 LTBP3Q9NS15 1303 aa20.1■□□□□ 0.81
XRCC3-210ENST00000554974 COL13A1Q5TAT6 717 aaPredicted RBP20.1■□□□□ 0.81
XRCC3-210ENST00000554974 DPY19L2Q6NUT2 758 aa20.1■□□□□ 0.81
XRCC3-210ENST00000554974 NBPF5PQ86XG9 351 aaPredicted RBP20.1■□□□□ 0.81
XRCC3-210ENST00000554974 RTF1Q92541 710 aaKnown RBP20.1■□□□□ 0.81
XRCC3-210ENST00000554974 CNKSR1Q969H4 720 aa20.1■□□□□ 0.81
XRCC3-210ENST00000554974 SNRPA1P09661 255 aaKnown RBP20.09■□□□□ 0.81
XRCC3-210ENST00000554974 MASTLQ96GX5 879 aa20.09■□□□□ 0.81
XRCC3-210ENST00000554974 DLG5Q8TDM6 1919 aa20.08■□□□□ 0.81
XRCC3-210ENST00000554974 NBPF26B4DH59 902 aa20.08■□□□□ 0.81
XRCC3-210ENST00000554974 NBPF10Q6P3W6 841 aaKnown RBP20.08■□□□□ 0.81
XRCC3-210ENST00000554974 NBPF15Q8N660 670 aa20.08■□□□□ 0.81
XRCC3-210ENST00000554974 DDNO94850 711 aaPredicted RBP20.07■□□□□ 0.8
XRCC3-210ENST00000554974 ZNF652Q9Y2D9 606 aa20.07■□□□□ 0.8
XRCC3-210ENST00000554974 KDM3BQ7LBC6 1761 aa20.07■□□□□ 0.8
XRCC3-210ENST00000554974 FAM177BA6PVY3 158 aa20.06■□□□□ 0.8
XRCC3-210ENST00000554974 POTEIP0CG38 1075 aa20.06■□□□□ 0.8
XRCC3-210ENST00000554974 POTEJP0CG39 1038 aa20.06■□□□□ 0.8
XRCC3-210ENST00000554974 CLEC4GQ6UXB4 293 aa20.06■□□□□ 0.8
XRCC3-210ENST00000554974 SOGA3Q5TF21 947 aa20.05■□□□□ 0.8
XRCC3-210ENST00000554974 OLFM4Q6UX06 510 aa20.05■□□□□ 0.8
XRCC3-210ENST00000554974 MIS18AQ9NYP9 233 aa20.05■□□□□ 0.8
XRCC3-210ENST00000554974 NIP7Q9Y221 180 aaKnown RBP eCLIP20.05■□□□□ 0.8
XRCC3-210ENST00000554974 C7orf43Q8WVR3 580 aa20.04■□□□□ 0.8
XRCC3-210ENST00000554974 NPR1P16066 1061 aa20.03■□□□□ 0.8
XRCC3-210ENST00000554974 CCDC93Q567U6 631 aa20.03■□□□□ 0.8
XRCC3-210ENST00000554974 SCN4AP35499 1836 aa20.02■□□□□ 0.8
XRCC3-210ENST00000554974 HSPA1AP0DMV8 641 aaKnown RBP20.02■□□□□ 0.8
XRCC3-210ENST00000554974 HSPA1BP0DMV9 641 aaKnown RBP20.02■□□□□ 0.8
XRCC3-210ENST00000554974 HLFQ16534 295 aa20.02■□□□□ 0.8
XRCC3-210ENST00000554974 CHADLQ6NUI6 762 aa20.02■□□□□ 0.8
XRCC3-210ENST00000554974 ABCC12Q96J65 1359 aa20.01■□□□□ 0.79
XRCC3-210ENST00000554974 HTATSF1O43719 755 aaKnown RBP20.01■□□□□ 0.79
XRCC3-210ENST00000554974 TAF7Q15545 349 aaPredicted RBP20.01■□□□□ 0.79
XRCC3-210ENST00000554974 TPTE2Q6XPS3 522 aa20.01■□□□□ 0.79
XRCC3-210ENST00000554974 ZNF277Q9NRM2 450 aaPredicted RBP20.01■□□□□ 0.79
XRCC3-210ENST00000554974 NUP98P52948 1817 aa20.01■□□□□ 0.79
XRCC3-210ENST00000554974 ZNF541Q9H0D2 1346 aa20.01■□□□□ 0.79
XRCC3-210ENST00000554974 KLRG2A4D1S0 409 aaPredicted RBP20■□□□□ 0.79
XRCC3-210ENST00000554974 CAPN15O75808 1086 aa20■□□□□ 0.79
XRCC3-210ENST00000554974 FKBP4Q02790 459 aaKnown RBP eCLIP19.99■□□□□ 0.79
XRCC3-210ENST00000554974 TNS4Q8IZW8 715 aa19.99■□□□□ 0.79
XRCC3-210ENST00000554974 NGEFQ8N5V2 710 aa19.99■□□□□ 0.79
XRCC3-210ENST00000554974 RGL2O15211 777 aa19.98■□□□□ 0.79
XRCC3-210ENST00000554974 L3MBTL3Q96JM7 780 aaPredicted RBP19.98■□□□□ 0.79
XRCC3-210ENST00000554974 THUMPD2Q9BTF0 503 aaKnown RBP19.98■□□□□ 0.79
XRCC3-210ENST00000554974 MKRN1Q9UHC7 482 aaKnown RBP19.98■□□□□ 0.79
XRCC3-210ENST00000554974 IQCA1LA6NCM1 817 aa19.97■□□□□ 0.79
XRCC3-210ENST00000554974 NUTM1Q86Y26 1132 aa19.97■□□□□ 0.79
XRCC3-210ENST00000554974 TAF1DQ9H5J8 278 aaPredicted RBP19.97■□□□□ 0.79
XRCC3-210ENST00000554974 CREBZFQ9NS37 354 aa19.97■□□□□ 0.79
XRCC3-210ENST00000554974 ADAMTSL1Q8N6G6 1762 aa19.97■□□□□ 0.79
XRCC3-210ENST00000554974 SNED1Q8TER0 1413 aa19.96■□□□□ 0.79
XRCC3-210ENST00000554974 GTF2E1P29083 439 aaPredicted RBP19.96■□□□□ 0.79
XRCC3-210ENST00000554974 COL4A5P29400 1685 aa19.95■□□□□ 0.78
XRCC3-210ENST00000554974 TTLL7Q6ZT98 887 aa19.95■□□□□ 0.78
XRCC3-210ENST00000554974 LDHDQ86WU2 507 aa19.95■□□□□ 0.78
XRCC3-210ENST00000554974 EAPPQ56P03 285 aaPredicted RBP19.94■□□□□ 0.78
XRCC3-210ENST00000554974 RTKN2Q8IZC4 609 aa19.94■□□□□ 0.78
XRCC3-210ENST00000554974 RRP7AQ9Y3A4 280 aaKnown RBP19.94■□□□□ 0.78
XRCC3-210ENST00000554974 MAP3K15Q6ZN16 1313 aa19.94■□□□□ 0.78
XRCC3-210ENST00000554974 PASKQ96RG2 1323 aa19.94■□□□□ 0.78
XRCC3-210ENST00000554974 NEFMP07197 916 aa19.93■□□□□ 0.78
XRCC3-210ENST00000554974 MYL6BP14649 208 aa19.93■□□□□ 0.78
XRCC3-210ENST00000554974 GPTP24298 496 aa19.93■□□□□ 0.78
XRCC3-210ENST00000554974 IARSP41252 1262 aaKnown RBP19.93■□□□□ 0.78
XRCC3-210ENST00000554974 EIF4A1P60842 406 aaKnown RBP19.93■□□□□ 0.78
XRCC3-210ENST00000554974 CRY2Q49AN0 593 aa19.93■□□□□ 0.78
XRCC3-210ENST00000554974 SLC51AQ86UW1 340 aa19.93■□□□□ 0.78
XRCC3-210ENST00000554974 PLEKHF1Q96S99 279 aa19.93■□□□□ 0.78
XRCC3-210ENST00000554974 ZBTB3Q9H5J0 574 aa19.93■□□□□ 0.78
XRCC3-210ENST00000554974 RNF123Q5XPI4 1314 aa19.93■□□□□ 0.78
XRCC3-210ENST00000554974 UBN2Q6ZU65 1347 aa19.93■□□□□ 0.78
XRCC3-210ENST00000554974 ALDH1B1P30837 517 aa19.92■□□□□ 0.78
XRCC3-210ENST00000554974 NFE2L2Q16236 605 aa19.92■□□□□ 0.78
XRCC3-210ENST00000554974 KIF6Q6ZMV9 814 aa19.92■□□□□ 0.78
XRCC3-210ENST00000554974 SYNE4Q8N205 404 aa19.92■□□□□ 0.78
XRCC3-210ENST00000554974 PNISRQ8TF01 805 aaKnown RBP19.92■□□□□ 0.78
XRCC3-210ENST00000554974 NYXQ9GZU5 481 aa19.92■□□□□ 0.78
XRCC3-210ENST00000554974 CNTNAP1P78357 1384 aa19.92■□□□□ 0.78
XRCC3-210ENST00000554974 ERVV-1B6SEH8 477 aa19.91■□□□□ 0.78
XRCC3-210ENST00000554974 HACL1Q9UJ83 578 aa19.91■□□□□ 0.78
XRCC3-210ENST00000554974 EPHX2P34913 555 aa19.9■□□□□ 0.78
XRCC3-210ENST00000554974 IBTKQ9P2D0 1353 aaPredicted RBP19.9■□□□□ 0.78
XRCC3-210ENST00000554974 RIC1Q4ADV7 1423 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms