RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 GAS2L2Q8NHY3 880 aa3.06□□□□□ -1.92
PRPF39-208ENST00000554785 ZIC5Q96T25 663 aa3.06□□□□□ -1.92
PRPF39-208ENST00000554785 CABP1Q9NZU7 370 aa3.06□□□□□ -1.92
PRPF39-208ENST00000554785 DCDC2BA2VCK2 349 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 KRBA1A5PL33 1030 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 SFI1A8K8P3 1242 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 LZTS3O60299 673 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-208ENST00000554785 FGFR3P22607 806 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 ARSJQ5FYB0 599 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-208ENST00000554785 EFHC2Q5JST6 749 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 ARTNQ5T4W7 220 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 SLC9A9Q8IVB4 645 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 WWC1Q8IX03 1113 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 TSEN2Q8NCE0 465 aaKnown RBP3.05□□□□□ -1.92
PRPF39-208ENST00000554785 L3MBTL2Q969R5 705 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 ZNF594Q96JF6 807 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-208ENST00000554785 TSPAN10Q9H1Z9 355 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-208ENST00000554785 STRN4Q9NRL3 753 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 KLF15Q9UIH9 416 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 PALM3A6NDB9 673 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-208ENST00000554785 SPDYE3A6NKU9 549 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 C21orf2O43822 256 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 MAPTP10636 758 aaKnown RBP3.05□□□□□ -1.92
PRPF39-208ENST00000554785 HOXB4P17483 251 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-208ENST00000554785 NOS2P35228 1153 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 TNP2Q05952 138 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 LCE5AQ5TCM9 118 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 SLCO4C1Q6ZQN7 724 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 EDARADDQ8WWZ3 215 aa3.05□□□□□ -1.92
PRPF39-208ENST00000554785 ATXN7L1Q9ULK2 861 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-208ENST00000554785 MAFBQ9Y5Q3 323 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-208ENST00000554785 BACH1O14867 736 aa3.04□□□□□ -1.92
PRPF39-208ENST00000554785 CD33P20138 364 aa3.04□□□□□ -1.92
PRPF39-208ENST00000554785 KRTAP1-1Q07627 177 aa3.04□□□□□ -1.92
PRPF39-208ENST00000554785 CRTC2Q53ET0 693 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-208ENST00000554785 KANK4Q5T7N3 995 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-208ENST00000554785 FMNL2Q96PY5 1086 aa3.04□□□□□ -1.92
PRPF39-208ENST00000554785 RRAGCQ9HB90 399 aa3.04□□□□□ -1.92
PRPF39-208ENST00000554785 AVENQ9NQS1 362 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-208ENST00000554785 GGA1Q9UJY5 639 aa3.04□□□□□ -1.92
PRPF39-208ENST00000554785 PCDHGC4Q9Y5F7 938 aa3.04□□□□□ -1.92
PRPF39-208ENST00000554785 A6NJR5 290 aa3.04□□□□□ -1.92
PRPF39-208ENST00000554785 EML1O00423 815 aa3.04□□□□□ -1.92
PRPF39-208ENST00000554785 ATXN7O15265 892 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-208ENST00000554785 TEAD4Q15561 434 aa3.04□□□□□ -1.92
PRPF39-208ENST00000554785 NBPF1Q3BBV0 1214 aa3.04□□□□□ -1.92
PRPF39-208ENST00000554785 FIGNL1Q6PIW4 674 aa3.04□□□□□ -1.92
PRPF39-208ENST00000554785 NLRP8Q86W28 1048 aa3.04□□□□□ -1.92
PRPF39-208ENST00000554785 C1orf216Q8TAB5 229 aa3.04□□□□□ -1.92
PRPF39-208ENST00000554785 CALR3Q96L12 384 aaKnown RBP3.04□□□□□ -1.92
PRPF39-208ENST00000554785 PPP1R12CQ9BZL4 782 aa3.04□□□□□ -1.92
PRPF39-208ENST00000554785 ZNF777Q9ULD5 760 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-208ENST00000554785 HCN4Q9Y3Q4 1203 aa3.04□□□□□ -1.92
PRPF39-208ENST00000554785 NEURL1BA8MQ27 555 aa3.03□□□□□ -1.92
PRPF39-208ENST00000554785 KHNYNO15037 678 aaKnown RBP3.03□□□□□ -1.92
PRPF39-208ENST00000554785 EFSO43281 561 aa3.03□□□□□ -1.92
PRPF39-208ENST00000554785 ARAFP10398 606 aa3.03□□□□□ -1.92
PRPF39-208ENST00000554785 BMP4P12644 408 aa3.03□□□□□ -1.92
PRPF39-208ENST00000554785 RASA1P20936 1047 aa3.03□□□□□ -1.92
PRPF39-208ENST00000554785 LRRC69Q6ZNQ3 347 aa3.03□□□□□ -1.92
PRPF39-208ENST00000554785 SIX5Q8N196 739 aa3.03□□□□□ -1.92
PRPF39-208ENST00000554785 LARGE2Q8N3Y3 721 aa3.03□□□□□ -1.92
PRPF39-208ENST00000554785 ZNF280CQ8ND82 737 aa3.03□□□□□ -1.92
PRPF39-208ENST00000554785 ZDHHC3Q9NYG2 299 aa3.03□□□□□ -1.92
PRPF39-208ENST00000554785 ZNF232Q9UNY5 417 aa3.03□□□□□ -1.92
PRPF39-208ENST00000554785 SERTM1A2A2V5 107 aa3.02□□□□□ -1.93
PRPF39-208ENST00000554785 TATP17735 454 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-208ENST00000554785 AMPD1P23109 780 aa3.02□□□□□ -1.93
PRPF39-208ENST00000554785 ATP1A2P50993 1020 aa3.02□□□□□ -1.93
PRPF39-208ENST00000554785 PCBP4P57723 403 aaKnown RBP3.02□□□□□ -1.93
PRPF39-208ENST00000554785 PTK7Q13308 1070 aa3.02□□□□□ -1.93
PRPF39-208ENST00000554785 POTEAQ6S8J7 498 aa3.02□□□□□ -1.93
PRPF39-208ENST00000554785 LINC00114Q6XXX2 140 aa3.02□□□□□ -1.93
PRPF39-208ENST00000554785 BICDL1Q6ZP65 573 aa3.02□□□□□ -1.93
PRPF39-208ENST00000554785 FCHSD1Q86WN1 690 aa3.02□□□□□ -1.93
PRPF39-208ENST00000554785 TRIM50Q86XT4 487 aa3.02□□□□□ -1.93
PRPF39-208ENST00000554785 HSH2DQ96JZ2 352 aa3.02□□□□□ -1.93
PRPF39-208ENST00000554785 ZMYND15Q9H091 742 aa3.02□□□□□ -1.93
PRPF39-208ENST00000554785 C1QTNF9BB2RNN3 333 aa3.02□□□□□ -1.93
PRPF39-208ENST00000554785 EPXP11678 715 aa3.02□□□□□ -1.93
PRPF39-208ENST00000554785 COL8A1P27658 744 aa3.02□□□□□ -1.93
PRPF39-208ENST00000554785 LMOD1P29536 600 aaPredicted RBP3.02□□□□□ -1.93
PRPF39-208ENST00000554785 SFSWAPQ12872 951 aaKnown RBP3.02□□□□□ -1.93
PRPF39-208ENST00000554785 CFAP70Q5T0N1 1121 aa3.02□□□□□ -1.93
PRPF39-208ENST00000554785 SUV39H2Q9H5I1 410 aa3.02□□□□□ -1.93
PRPF39-208ENST00000554785 ATAD2Q6PL18 1390 aa3.02□□□□□ -1.93
PRPF39-208ENST00000554785 FAM157BP0CG42 384 aa3.01□□□□□ -1.93
PRPF39-208ENST00000554785 SPATA31C1P0DKV0 1188 aa3.01□□□□□ -1.93
PRPF39-208ENST00000554785 ITGB7P26010 798 aa3.01□□□□□ -1.93
PRPF39-208ENST00000554785 GATA4P43694 442 aa3.01□□□□□ -1.93
PRPF39-208ENST00000554785 DPYDQ12882 1025 aa3.01□□□□□ -1.93
PRPF39-208ENST00000554785 CDCA8Q53HL2 280 aa3.01□□□□□ -1.93
PRPF39-208ENST00000554785 SAMD5Q5TGI4 173 aa3.01□□□□□ -1.93
PRPF39-208ENST00000554785 SCG3Q8WXD2 468 aaKnown RBP3.01□□□□□ -1.93
PRPF39-208ENST00000554785 BTBD6Q96KE9 485 aa3.01□□□□□ -1.93
PRPF39-208ENST00000554785 ARXQ96QS3 562 aa3.01□□□□□ -1.93
PRPF39-208ENST00000554785 SLC30A3Q99726 388 aa3.01□□□□□ -1.93
PRPF39-208ENST00000554785 PHACTR1Q9C0D0 580 aa3.01□□□□□ -1.93
PRPF39-208ENST00000554785 M0R2N6 131 aa3.01□□□□□ -1.93
PRPF39-208ENST00000554785 PSMA6P60900 246 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms