RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 C4AP0C0L4 1744 aa15.57■□□□□ 0.08
RIPK3-204ENST00000554756 CAMTA2O94983 1202 aa15.57■□□□□ 0.08
RIPK3-204ENST00000554756 MMP10P09238 476 aa15.57■□□□□ 0.08
RIPK3-204ENST00000554756 DDX21Q9NR30 783 aaKnown RBP eCLIP15.57■□□□□ 0.08
RIPK3-204ENST00000554756 RRP1P56182 461 aaKnown RBP15.56■□□□□ 0.08
RIPK3-204ENST00000554756 AIMP1Q12904 312 aaKnown RBP15.56■□□□□ 0.08
RIPK3-204ENST00000554756 BICDL1Q6ZP65 573 aa15.56■□□□□ 0.08
RIPK3-204ENST00000554756 LRP10Q7Z4F1 713 aa15.56■□□□□ 0.08
RIPK3-204ENST00000554756 DBF4Q9UBU7 674 aaPredicted RBP15.56■□□□□ 0.08
RIPK3-204ENST00000554756 CCDC30Q5VVM6 783 aa15.55■□□□□ 0.08
RIPK3-204ENST00000554756 KIF6Q6ZMV9 814 aa15.55■□□□□ 0.08
RIPK3-204ENST00000554756 KLHL34Q8N239 644 aa15.55■□□□□ 0.08
RIPK3-204ENST00000554756 XAGE3Q8WTP9 111 aa15.55■□□□□ 0.08
RIPK3-204ENST00000554756 VAMP4O75379 141 aa15.54■□□□□ 0.08
RIPK3-204ENST00000554756 COPS6Q7L5N1 327 aa15.54■□□□□ 0.08
RIPK3-204ENST00000554756 ZBTB3Q9H5J0 574 aa15.54■□□□□ 0.08
RIPK3-204ENST00000554756 NFIXQ14938 502 aa15.54■□□□□ 0.08
RIPK3-204ENST00000554756 HLFQ16534 295 aa15.54■□□□□ 0.08
RIPK3-204ENST00000554756 TBC1D9BQ66K14 1250 aa15.54■□□□□ 0.08
RIPK3-204ENST00000554756 TM4SF1P30408 202 aa15.53■□□□□ 0.08
RIPK3-204ENST00000554756 DDR1Q08345 913 aa15.53■□□□□ 0.08
RIPK3-204ENST00000554756 PARP3Q9Y6F1 533 aa15.53■□□□□ 0.08
RIPK3-204ENST00000554756 MAP3K15Q6ZN16 1313 aa15.52■□□□□ 0.08
RIPK3-204ENST00000554756 PHAXQ9H814 394 aaKnown RBP15.52■□□□□ 0.08
RIPK3-204ENST00000554756 HYPKQ9NX55 129 aa15.52■□□□□ 0.08
RIPK3-204ENST00000554756 STK31Q9BXU1 1019 aa15.52■□□□□ 0.07
RIPK3-204ENST00000554756 CHMP4AQ9BY43 222 aa15.52■□□□□ 0.07
RIPK3-204ENST00000554756 ZNF652Q9Y2D9 606 aa15.52■□□□□ 0.07
RIPK3-204ENST00000554756 ERVV-1B6SEH8 477 aa15.51■□□□□ 0.07
RIPK3-204ENST00000554756 TRMT2AQ8IZ69 625 aaKnown RBP15.51■□□□□ 0.07
RIPK3-204ENST00000554756 FHDC1Q9C0D6 1143 aaPredicted RBP15.51■□□□□ 0.07
RIPK3-204ENST00000554756 POLRMTO00411 1230 aaKnown RBP15.5■□□□□ 0.07
RIPK3-204ENST00000554756 SLC4A2P04920 1241 aa15.49■□□□□ 0.07
RIPK3-204ENST00000554756 CLEC4GQ6UXB4 293 aa15.49■□□□□ 0.07
RIPK3-204ENST00000554756 SETDB2Q96T68 719 aa15.49■□□□□ 0.07
RIPK3-204ENST00000554756 COL24A1Q17RW2 1714 aa15.49■□□□□ 0.07
RIPK3-204ENST00000554756 SCN7AQ01118 1682 aa15.49■□□□□ 0.07
RIPK3-204ENST00000554756 FAM177BA6PVY3 158 aa15.49■□□□□ 0.07
RIPK3-204ENST00000554756 SERPINB2P05120 415 aa15.49■□□□□ 0.07
RIPK3-204ENST00000554756 G2E3Q7L622 706 aa15.49■□□□□ 0.07
RIPK3-204ENST00000554756 NIP7Q9Y221 180 aaKnown RBP eCLIP15.49■□□□□ 0.07
RIPK3-204ENST00000554756 GPTP24298 496 aa15.48■□□□□ 0.07
RIPK3-204ENST00000554756 B4GALNT3Q6L9W6 998 aa15.48■□□□□ 0.07
RIPK3-204ENST00000554756 CCDC136Q96JN2 1154 aa15.48■□□□□ 0.07
RIPK3-204ENST00000554756 GIGYF2Q6Y7W6 1299 aaKnown RBP15.47■□□□□ 0.07
RIPK3-204ENST00000554756 ANKRD13DQ6ZTN6 518 aa15.47■□□□□ 0.07
RIPK3-204ENST00000554756 PLBD2Q8NHP8 589 aa15.47■□□□□ 0.07
RIPK3-204ENST00000554756 SYT17Q9BSW7 474 aa15.47■□□□□ 0.07
RIPK3-204ENST00000554756 RGL2O15211 777 aa15.47■□□□□ 0.07
RIPK3-204ENST00000554756 RIC3Q7Z5B4 369 aa15.47■□□□□ 0.07
RIPK3-204ENST00000554756 CCDC24Q8N4L8 307 aa15.47■□□□□ 0.07
RIPK3-204ENST00000554756 BCORQ6W2J9 1755 aa15.46■□□□□ 0.07
RIPK3-204ENST00000554756 CARMIL3Q8ND23 1372 aa15.46■□□□□ 0.07
RIPK3-204ENST00000554756 NLGN2Q8NFZ4 835 aa15.46■□□□□ 0.07
RIPK3-204ENST00000554756 RBM19Q9Y4C8 960 aaKnown RBP15.46■□□□□ 0.07
RIPK3-204ENST00000554756 NPHP1O15259 732 aa15.45■□□□□ 0.06
RIPK3-204ENST00000554756 ZNF428Q96B54 188 aa15.45■□□□□ 0.06
RIPK3-204ENST00000554756 CD2APQ9Y5K6 639 aa15.45■□□□□ 0.06
RIPK3-204ENST00000554756 DDX58O95786 925 aaKnown RBP15.44■□□□□ 0.06
RIPK3-204ENST00000554756 FLIIQ13045 1269 aa15.44■□□□□ 0.06
RIPK3-204ENST00000554756 NBPF5PQ86XG9 351 aaPredicted RBP15.44■□□□□ 0.06
RIPK3-204ENST00000554756 ZNF34Q8IZ26 560 aa15.44■□□□□ 0.06
RIPK3-204ENST00000554756 BCL2L13Q9BXK5 485 aa15.44■□□□□ 0.06
RIPK3-204ENST00000554756 TCIRG1Q13488 830 aa15.44■□□□□ 0.06
RIPK3-204ENST00000554756 HSP90AB3PQ58FF7 597 aa15.44■□□□□ 0.06
RIPK3-204ENST00000554756 SUSD4Q5VX71 490 aa15.44■□□□□ 0.06
RIPK3-204ENST00000554756 PRR5LQ6MZQ0 368 aa15.44■□□□□ 0.06
RIPK3-204ENST00000554756 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.44■□□□□ 0.06
RIPK3-204ENST00000554756 UBN2Q6ZU65 1347 aa15.43■□□□□ 0.06
RIPK3-204ENST00000554756 ATP10DQ9P241 1426 aa15.43■□□□□ 0.06
RIPK3-204ENST00000554756 DCAF8L1A6NGE4 600 aa15.43■□□□□ 0.06
RIPK3-204ENST00000554756 ATP5J2-PTCD1G3V325 749 aa15.43■□□□□ 0.06
RIPK3-204ENST00000554756 CNBD1Q8NA66 436 aa15.43■□□□□ 0.06
RIPK3-204ENST00000554756 SSH1Q8WYL5 1049 aa15.43■□□□□ 0.06
RIPK3-204ENST00000554756 MAP3K2Q9Y2U5 619 aa15.43■□□□□ 0.06
RIPK3-204ENST00000554756 C10orf71Q711Q0 1435 aa15.42■□□□□ 0.06
RIPK3-204ENST00000554756 PI4KAP2A4QPH2 592 aa15.42■□□□□ 0.06
RIPK3-204ENST00000554756 FKBP5Q13451 457 aaPredicted RBP15.42■□□□□ 0.06
RIPK3-204ENST00000554756 KSR2Q6VAB6 950 aa15.42■□□□□ 0.06
RIPK3-204ENST00000554756 MRPL50Q8N5N7 158 aaKnown RBP15.42■□□□□ 0.06
RIPK3-204ENST00000554756 PI4KAP1Q8N8J0 262 aa15.42■□□□□ 0.06
RIPK3-204ENST00000554756 MYD88Q99836 296 aa15.42■□□□□ 0.06
RIPK3-204ENST00000554756 GTF2E1P29083 439 aaPredicted RBP15.41■□□□□ 0.06
RIPK3-204ENST00000554756 TPTE2Q6XPS3 522 aa15.41■□□□□ 0.06
RIPK3-204ENST00000554756 NUTM1Q86Y26 1132 aa15.41■□□□□ 0.06
RIPK3-204ENST00000554756 WWC3Q9ULE0 1092 aa15.41■□□□□ 0.06
RIPK3-204ENST00000554756 CT47B1P0C2W7 299 aaPredicted RBP15.41■□□□□ 0.06
RIPK3-204ENST00000554756 ST5P78524 1137 aa15.41■□□□□ 0.06
RIPK3-204ENST00000554756 PARP10Q53GL7 1025 aa15.41■□□□□ 0.06
RIPK3-204ENST00000554756 NLRP10Q86W26 655 aa15.41■□□□□ 0.06
RIPK3-204ENST00000554756 SMC4Q9NTJ3 1288 aa15.41■□□□□ 0.06
RIPK3-204ENST00000554756 ADCY9O60503 1353 aa15.41■□□□□ 0.06
RIPK3-204ENST00000554756 A0A0G2JLW4 131 aa15.4■□□□□ 0.06
RIPK3-204ENST00000554756 CHRNA5P30532 468 aa15.4■□□□□ 0.06
RIPK3-204ENST00000554756 ISCA1Q9BUE6 129 aa15.4■□□□□ 0.06
RIPK3-204ENST00000554756 METTL22Q9BUU2 404 aaPredicted RBP15.4■□□□□ 0.06
RIPK3-204ENST00000554756 F6X3S4 739 aa15.39■□□□□ 0.05
RIPK3-204ENST00000554756 DPEP1P16444 411 aa15.39■□□□□ 0.05
RIPK3-204ENST00000554756 ERFEQ4G0M1 354 aa15.39■□□□□ 0.05
RIPK3-204ENST00000554756 PPP1R42Q7Z4L9 355 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms