RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 FGFR1OPO95684 399 aaKnown RBP16.15■□□□□ 0.18
VTI1B-204ENST00000554659 PIBF1Q8WXW3 757 aa16.15■□□□□ 0.18
VTI1B-204ENST00000554659 CCDC113Q9H0I3 377 aa16.15■□□□□ 0.18
VTI1B-204ENST00000554659 PCDHB15Q9Y5E8 787 aa16.15■□□□□ 0.18
VTI1B-204ENST00000554659 GOLGA8AA7E2F4 631 aa16.14■□□□□ 0.17
VTI1B-204ENST00000554659 SNW1Q13573 536 aaKnown RBP16.14■□□□□ 0.17
VTI1B-204ENST00000554659 XRCC6P12956 609 aaKnown RBP eCLIP16.14■□□□□ 0.17
VTI1B-204ENST00000554659 SEC63Q9UGP8 760 aaKnown RBP16.14■□□□□ 0.17
VTI1B-204ENST00000554659 USO1O60763 962 aaKnown RBP16.14■□□□□ 0.17
VTI1B-204ENST00000554659 IFIT5Q13325 482 aaKnown RBP16.14■□□□□ 0.17
VTI1B-204ENST00000554659 PPP4R3BQ5MIZ7 849 aa16.14■□□□□ 0.17
VTI1B-204ENST00000554659 ADGRL1O94910 1474 aa16.14■□□□□ 0.17
VTI1B-204ENST00000554659 SDSP20132 328 aa16.14■□□□□ 0.17
VTI1B-204ENST00000554659 NUP88Q99567 741 aaPredicted RBP16.14■□□□□ 0.17
VTI1B-204ENST00000554659 PARD3Q8TEW0 1356 aa16.13■□□□□ 0.17
VTI1B-204ENST00000554659 CCT2P78371 535 aaKnown RBP16.13■□□□□ 0.17
VTI1B-204ENST00000554659 NEK1Q96PY6 1258 aa16.13■□□□□ 0.17
VTI1B-204ENST00000554659 CCDC171Q6TFL3 1326 aa16.13■□□□□ 0.17
VTI1B-204ENST00000554659 ZC3H6P61129 1189 aaKnown RBP16.13■□□□□ 0.17
VTI1B-204ENST00000554659 CACNA2D4Q7Z3S7 1137 aa16.13■□□□□ 0.17
VTI1B-204ENST00000554659 LARP6Q9BRS8 491 aaKnown RBP16.13■□□□□ 0.17
VTI1B-204ENST00000554659 MINDY4BA8MYZ0 360 aa16.13■□□□□ 0.17
VTI1B-204ENST00000554659 HCLS1P14317 486 aaPredicted RBP16.13■□□□□ 0.17
VTI1B-204ENST00000554659 ZNF76P36508 570 aa16.13■□□□□ 0.17
VTI1B-204ENST00000554659 PPP1R42Q7Z4L9 355 aa16.13■□□□□ 0.17
VTI1B-204ENST00000554659 IQCA1Q86XH1 822 aa16.13■□□□□ 0.17
VTI1B-204ENST00000554659 KLHL34Q8N239 644 aa16.13■□□□□ 0.17
VTI1B-204ENST00000554659 PAFAH1B1P43034 410 aa16.12■□□□□ 0.17
VTI1B-204ENST00000554659 CAVIN4Q5BKX8 364 aa16.12■□□□□ 0.17
VTI1B-204ENST00000554659 CEP135Q66GS9 1140 aa16.12■□□□□ 0.17
VTI1B-204ENST00000554659 VPS36Q86VN1 386 aa16.12■□□□□ 0.17
VTI1B-204ENST00000554659 SSR1P43307 286 aaKnown RBP16.12■□□□□ 0.17
VTI1B-204ENST00000554659 TICAM2Q86XR7 235 aa16.12■□□□□ 0.17
VTI1B-204ENST00000554659 RAB34Q9BZG1 259 aa16.12■□□□□ 0.17
VTI1B-204ENST00000554659 FAM107BQ9H098 131 aa16.12■□□□□ 0.17
VTI1B-204ENST00000554659 NUP160Q12769 1436 aa16.12■□□□□ 0.17
VTI1B-204ENST00000554659 IFIT3O14879 490 aaKnown RBP16.11■□□□□ 0.17
VTI1B-204ENST00000554659 BMS1Q14692 1282 aaKnown RBP16.11■□□□□ 0.17
VTI1B-204ENST00000554659 PYM1Q9BRP8 204 aaKnown RBP16.11■□□□□ 0.17
VTI1B-204ENST00000554659 USP5P45974 858 aa16.11■□□□□ 0.17
VTI1B-204ENST00000554659 KANK3Q6NY19 840 aa16.11■□□□□ 0.17
VTI1B-204ENST00000554659 GTF2F1P35269 517 aaKnown RBP eCLIP16.11■□□□□ 0.17
VTI1B-204ENST00000554659 USHBP1Q8N6Y0 703 aa16.11■□□□□ 0.17
VTI1B-204ENST00000554659 USP16Q9Y5T5 823 aa16.11■□□□□ 0.17
VTI1B-204ENST00000554659 A0A087WZG4 1122 aa16.11■□□□□ 0.17
VTI1B-204ENST00000554659 MAP3K2Q9Y2U5 619 aa16.11■□□□□ 0.17
VTI1B-204ENST00000554659 SLC5A1P13866 664 aa16.1■□□□□ 0.17
VTI1B-204ENST00000554659 ANKRD44Q8N8A2 993 aa16.1■□□□□ 0.17
VTI1B-204ENST00000554659 IPO4Q8TEX9 1081 aaKnown RBP16.1■□□□□ 0.17
VTI1B-204ENST00000554659 KIF20AO95235 890 aa16.1■□□□□ 0.17
VTI1B-204ENST00000554659 MPRIPQ6WCQ1 1025 aa16.1■□□□□ 0.17
VTI1B-204ENST00000554659 LUZP1Q86V48 1076 aa16.1■□□□□ 0.17
VTI1B-204ENST00000554659 RNF187Q5TA31 235 aaPredicted RBP16.1■□□□□ 0.17
VTI1B-204ENST00000554659 RHPN1Q8TCX5 695 aa16.1■□□□□ 0.17
VTI1B-204ENST00000554659 ZNF652Q9Y2D9 606 aa16.1■□□□□ 0.17
VTI1B-204ENST00000554659 BIN1O00499 593 aa16.1■□□□□ 0.17
VTI1B-204ENST00000554659 IARSP41252 1262 aaKnown RBP16.1■□□□□ 0.17
VTI1B-204ENST00000554659 GIMAP6Q6P9H5 292 aa16.1■□□□□ 0.17
VTI1B-204ENST00000554659 CETN2P41208 172 aa16.09■□□□□ 0.17
VTI1B-204ENST00000554659 TTF1Q15361 905 aaPredicted RBP16.09■□□□□ 0.17
VTI1B-204ENST00000554659 CCDC91Q7Z6B0 441 aa16.09■□□□□ 0.17
VTI1B-204ENST00000554659 ESYT1Q9BSJ8 1104 aa16.09■□□□□ 0.17
VTI1B-204ENST00000554659 TMOD3Q9NYL9 352 aa16.09■□□□□ 0.17
VTI1B-204ENST00000554659 ORC3Q9UBD5 711 aaPredicted RBP16.09■□□□□ 0.17
VTI1B-204ENST00000554659 PDE1AP54750 535 aa16.09■□□□□ 0.17
VTI1B-204ENST00000554659 CPLX3Q8WVH0 158 aa16.09■□□□□ 0.17
VTI1B-204ENST00000554659 MKNK2Q9HBH9 465 aa16.09■□□□□ 0.17
VTI1B-204ENST00000554659 ZHX1Q9UKY1 873 aaPredicted RBP16.09■□□□□ 0.17
VTI1B-204ENST00000554659 TMEM266Q2M3C6 531 aa16.09■□□□□ 0.17
VTI1B-204ENST00000554659 CCDC102BQ68D86 513 aa16.09■□□□□ 0.17
VTI1B-204ENST00000554659 FAM200AQ8TCP9 573 aa16.09■□□□□ 0.17
VTI1B-204ENST00000554659 GRIN2AQ12879 1464 aa16.09■□□□□ 0.17
VTI1B-204ENST00000554659 PTCD1O75127 700 aaKnown RBP16.09■□□□□ 0.17
VTI1B-204ENST00000554659 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
VTI1B-204ENST00000554659 CCDC194A0A1B0GVG4 234 aa16.09■□□□□ 0.17
VTI1B-204ENST00000554659 RBM5P52756 815 aaKnown RBP eCLIP16.09■□□□□ 0.17
VTI1B-204ENST00000554659 NOLC1Q14978 699 aaKnown RBP eCLIP16.09■□□□□ 0.17
VTI1B-204ENST00000554659 TSHZ3Q63HK5 1081 aa16.09■□□□□ 0.17
VTI1B-204ENST00000554659 GOLIM4O00461 696 aa16.08■□□□□ 0.17
VTI1B-204ENST00000554659 POTEJP0CG39 1038 aa16.08■□□□□ 0.17
VTI1B-204ENST00000554659 MICALCLQ6ZW33 695 aa16.08■□□□□ 0.17
VTI1B-204ENST00000554659 CATIPQ7Z7H3 387 aa16.08■□□□□ 0.17
VTI1B-204ENST00000554659 CD109Q6YHK3 1445 aa16.08■□□□□ 0.16
VTI1B-204ENST00000554659 ANKRD18BA2A2Z9 1011 aa16.08■□□□□ 0.16
VTI1B-204ENST00000554659 HS1BP3Q53T59 392 aa16.08■□□□□ 0.16
VTI1B-204ENST00000554659 ZSCAN29Q8IWY8 852 aaPredicted RBP16.08■□□□□ 0.16
VTI1B-204ENST00000554659 SMC5Q8IY18 1101 aa16.08■□□□□ 0.16
VTI1B-204ENST00000554659 ALS2CR12Q96Q35 445 aa16.08■□□□□ 0.16
VTI1B-204ENST00000554659 ZKSCAN5Q9Y2L8 839 aa16.08■□□□□ 0.16
VTI1B-204ENST00000554659 FAM83GA6ND36 823 aa16.08■□□□□ 0.16
VTI1B-204ENST00000554659 RANBP6O60518 1105 aaKnown RBP16.08■□□□□ 0.16
VTI1B-204ENST00000554659 IFFO1Q0D2I5 559 aa16.08■□□□□ 0.16
VTI1B-204ENST00000554659 DESP17661 470 aa16.08■□□□□ 0.16
VTI1B-204ENST00000554659 NCOA7Q8NI08 942 aa16.08■□□□□ 0.16
VTI1B-204ENST00000554659 POLR3AO14802 1390 aaPredicted RBP16.07■□□□□ 0.16
VTI1B-204ENST00000554659 POLR3DP05423 398 aaPredicted RBP16.07■□□□□ 0.16
VTI1B-204ENST00000554659 NLRP5P59047 1200 aa16.07■□□□□ 0.16
VTI1B-204ENST00000554659 IDI1Q13907 227 aa16.07■□□□□ 0.16
VTI1B-204ENST00000554659 USP48Q86UV5 1035 aa16.07■□□□□ 0.16
VTI1B-204ENST00000554659 SMARCC1Q92922 1105 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms