RNA–Protein interactions for RNA: ENST00000554543.1

ITGA7-210, Transcript of integrin subunit alpha 7, humanhuman

TSL 3

Gene ITGA7, Length 707 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-210ENST00000554543 TSR2Q969E8 191 aaKnown RBP16.35■□□□□ 0.21
ITGA7-210ENST00000554543 BCS1LQ9Y276 419 aa16.35■□□□□ 0.21
ITGA7-210ENST00000554543 CHL1O00533 1208 aa16.34■□□□□ 0.21
ITGA7-210ENST00000554543 GPTP24298 496 aa16.34■□□□□ 0.21
ITGA7-210ENST00000554543 DLEC1Q9Y238 1755 aa16.33■□□□□ 0.21
ITGA7-210ENST00000554543 TCERG1O14776 1098 aaKnown RBP16.33■□□□□ 0.2
ITGA7-210ENST00000554543 AIMP1Q12904 312 aaKnown RBP16.33■□□□□ 0.2
ITGA7-210ENST00000554543 ZNF219Q9P2Y4 722 aaPredicted RBP16.33■□□□□ 0.2
ITGA7-210ENST00000554543 TNRC6CQ9HCJ0 1690 aaKnown RBP16.33■□□□□ 0.2
ITGA7-210ENST00000554543 NPHP1O15259 732 aa16.32■□□□□ 0.2
ITGA7-210ENST00000554543 CHPF2Q9P2E5 772 aa16.32■□□□□ 0.2
ITGA7-210ENST00000554543 ANKRD36CQ5JPF3 1778 aa16.31■□□□□ 0.2
ITGA7-210ENST00000554543 KCNA3P22001 575 aa16.31■□□□□ 0.2
ITGA7-210ENST00000554543 PDIA6Q15084 440 aa16.31■□□□□ 0.2
ITGA7-210ENST00000554543 NIP7Q9Y221 180 aaKnown RBP eCLIP16.31■□□□□ 0.2
ITGA7-210ENST00000554543 ARFGEF1Q9Y6D6 1849 aa16.31■□□□□ 0.2
ITGA7-210ENST00000554543 DUSP27Q5VZP5 1158 aa16.3■□□□□ 0.2
ITGA7-210ENST00000554543 PRR5LQ6MZQ0 368 aa16.3■□□□□ 0.2
ITGA7-210ENST00000554543 C2CD5Q86YS7 1000 aa16.3■□□□□ 0.2
ITGA7-210ENST00000554543 C8orf58Q8NAV2 365 aa16.3■□□□□ 0.2
ITGA7-210ENST00000554543 SETDB2Q96T68 719 aa16.3■□□□□ 0.2
ITGA7-210ENST00000554543 CCDC88AQ3V6T2 1871 aa16.3■□□□□ 0.2
ITGA7-210ENST00000554543 HDGFL1Q5TGJ6 251 aa16.29■□□□□ 0.2
ITGA7-210ENST00000554543 KIF6Q6ZMV9 814 aa16.29■□□□□ 0.2
ITGA7-210ENST00000554543 TSPYL6Q8N831 410 aa16.29■□□□□ 0.2
ITGA7-210ENST00000554543 XAGE3Q8WTP9 111 aa16.29■□□□□ 0.2
ITGA7-210ENST00000554543 CFAP44Q96MT7 982 aa16.29■□□□□ 0.2
ITGA7-210ENST00000554543 ARFGEF2Q9Y6D5 1785 aa16.28■□□□□ 0.2
ITGA7-210ENST00000554543 ZNF853P0CG23 659 aa16.28■□□□□ 0.2
ITGA7-210ENST00000554543 NUTM1Q86Y26 1132 aa16.28■□□□□ 0.2
ITGA7-210ENST00000554543 WWC1Q8IX03 1113 aa16.28■□□□□ 0.2
ITGA7-210ENST00000554543 CNBD1Q8NA66 436 aa16.28■□□□□ 0.2
ITGA7-210ENST00000554543 MAP3K15Q6ZN16 1313 aa16.27■□□□□ 0.2
ITGA7-210ENST00000554543 SLX4Q8IY92 1834 aa16.27■□□□□ 0.2
ITGA7-210ENST00000554543 TGFB2P61812 414 aa16.27■□□□□ 0.2
ITGA7-210ENST00000554543 LRP10Q7Z4F1 713 aa16.27■□□□□ 0.2
ITGA7-210ENST00000554543 NBPF5PQ86XG9 351 aaPredicted RBP16.27■□□□□ 0.2
ITGA7-210ENST00000554543 ZNF526Q8TF50 670 aaPredicted RBP16.27■□□□□ 0.2
ITGA7-210ENST00000554543 IFT57Q9NWB7 429 aa16.27■□□□□ 0.2
ITGA7-210ENST00000554543 ABCC12Q96J65 1359 aa16.26■□□□□ 0.19
ITGA7-210ENST00000554543 UBN2Q6ZU65 1347 aa16.26■□□□□ 0.19
ITGA7-210ENST00000554543 GNAI1P63096 354 aa16.26■□□□□ 0.19
ITGA7-210ENST00000554543 ARHGAP27Q6ZUM4 889 aa16.26■□□□□ 0.19
ITGA7-210ENST00000554543 COPS6Q7L5N1 327 aa16.26■□□□□ 0.19
ITGA7-210ENST00000554543 SLC51AQ86UW1 340 aa16.26■□□□□ 0.19
ITGA7-210ENST00000554543 ZNF622Q969S3 477 aaKnown RBP eCLIP16.26■□□□□ 0.19
ITGA7-210ENST00000554543 SPINK5Q9NQ38 1064 aaPredicted RBP16.26■□□□□ 0.19
ITGA7-210ENST00000554543 ZNF652Q9Y2D9 606 aa16.26■□□□□ 0.19
ITGA7-210ENST00000554543 LAMB2P55268 1798 aa16.26■□□□□ 0.19
ITGA7-210ENST00000554543 TAF1P21675 1872 aa16.25■□□□□ 0.19
ITGA7-210ENST00000554543 RASSF7Q02833 373 aa16.24■□□□□ 0.19
ITGA7-210ENST00000554543 ERFEQ4G0M1 354 aa16.24■□□□□ 0.19
ITGA7-210ENST00000554543 DALRD3Q5D0E6 543 aaKnown RBP16.24■□□□□ 0.19
ITGA7-210ENST00000554543 PHAXQ9H814 394 aaKnown RBP16.24■□□□□ 0.19
ITGA7-210ENST00000554543 BABAM1Q9NWV8 329 aa16.24■□□□□ 0.19
ITGA7-210ENST00000554543 PIM2Q9P1W9 311 aa16.24■□□□□ 0.19
ITGA7-210ENST00000554543 SBF1O95248 1867 aa16.24■□□□□ 0.19
ITGA7-210ENST00000554543 GRIN3BO60391 1043 aa16.23■□□□□ 0.19
ITGA7-210ENST00000554543 ST5P78524 1137 aa16.23■□□□□ 0.19
ITGA7-210ENST00000554543 SUSD4Q5VX71 490 aa16.23■□□□□ 0.19
ITGA7-210ENST00000554543 SYNE4Q8N205 404 aa16.23■□□□□ 0.19
ITGA7-210ENST00000554543 H0YIN7 160 aa16.22■□□□□ 0.19
ITGA7-210ENST00000554543 GTF2E1P29083 439 aaPredicted RBP16.22■□□□□ 0.19
ITGA7-210ENST00000554543 OLFM4Q6UX06 510 aa16.22■□□□□ 0.19
ITGA7-210ENST00000554543 C3orf67Q6ZVT6 689 aa16.22■□□□□ 0.19
ITGA7-210ENST00000554543 MIER1Q8N108 512 aa16.22■□□□□ 0.19
ITGA7-210ENST00000554543 ZNF784Q8NCA9 323 aaPredicted RBP16.22■□□□□ 0.19
ITGA7-210ENST00000554543 DDX21Q9NR30 783 aaKnown RBP eCLIP16.22■□□□□ 0.19
ITGA7-210ENST00000554543 FANCIQ9NVI1 1328 aa16.21■□□□□ 0.19
ITGA7-210ENST00000554543 ATP5J2-PTCD1G3V325 749 aa16.21■□□□□ 0.19
ITGA7-210ENST00000554543 CALD1Q05682 793 aaKnown RBP16.21■□□□□ 0.19
ITGA7-210ENST00000554543 RTL5Q5HYW3 569 aaPredicted RBP16.21■□□□□ 0.19
ITGA7-210ENST00000554543 ERBB4Q15303 1308 aa16.2■□□□□ 0.18
ITGA7-210ENST00000554543 DIEXFQ68CQ4 756 aaKnown RBP16.2■□□□□ 0.18
ITGA7-210ENST00000554543 CLEC4GQ6UXB4 293 aa16.2■□□□□ 0.18
ITGA7-210ENST00000554543 JARID2Q92833 1246 aaPredicted RBP16.2■□□□□ 0.18
ITGA7-210ENST00000554543 ATP10DQ9P241 1426 aa16.19■□□□□ 0.18
ITGA7-210ENST00000554543 DDX60Q8IY21 1712 aaKnown RBP16.19■□□□□ 0.18
ITGA7-210ENST00000554543 ERVV-1B6SEH8 477 aa16.19■□□□□ 0.18
ITGA7-210ENST00000554543 C21orf2O43822 256 aa16.19■□□□□ 0.18
ITGA7-210ENST00000554543 EXOSC9Q06265 439 aaKnown RBP16.19■□□□□ 0.18
ITGA7-210ENST00000554543 GIGYF2Q6Y7W6 1299 aaKnown RBP16.19■□□□□ 0.18
ITGA7-210ENST00000554543 BRIP1Q9BX63 1249 aa16.19■□□□□ 0.18
ITGA7-210ENST00000554543 PDE6BP35913 854 aa16.18■□□□□ 0.18
ITGA7-210ENST00000554543 CCDC27Q2M243 656 aa16.18■□□□□ 0.18
ITGA7-210ENST00000554543 G2E3Q7L622 706 aa16.18■□□□□ 0.18
ITGA7-210ENST00000554543 ZNF34Q8IZ26 560 aa16.18■□□□□ 0.18
ITGA7-210ENST00000554543 TIAM2Q8IVF5 1701 aa16.18■□□□□ 0.18
ITGA7-210ENST00000554543 FER1L6Q2WGJ9 1857 aa16.17■□□□□ 0.18
ITGA7-210ENST00000554543 NTSR2O95665 410 aa16.17■□□□□ 0.18
ITGA7-210ENST00000554543 HCLS1P14317 486 aaPredicted RBP16.17■□□□□ 0.18
ITGA7-210ENST00000554543 PRELPP51888 382 aa16.17■□□□□ 0.18
ITGA7-210ENST00000554543 TWISTNBQ3B726 338 aaPredicted RBP16.17■□□□□ 0.18
ITGA7-210ENST00000554543 TPTE2Q6XPS3 522 aa16.17■□□□□ 0.18
ITGA7-210ENST00000554543 TTLL6Q8N841 843 aa16.17■□□□□ 0.18
ITGA7-210ENST00000554543 DBF4Q9UBU7 674 aaPredicted RBP16.17■□□□□ 0.18
ITGA7-210ENST00000554543 COL4A1P02462 1669 aa16.16■□□□□ 0.18
ITGA7-210ENST00000554543 PRPF40BQ6NWY9 871 aaKnown RBP16.16■□□□□ 0.18
ITGA7-210ENST00000554543 HOXB7P09629 217 aa16.15■□□□□ 0.18
ITGA7-210ENST00000554543 SRGNP10124 158 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms