RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 RGL3Q3MIN7 710 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 NBPF14Q5TI25 921 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 PRDM11Q9NQV5 511 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 AAASQ9NRG9 546 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 ACEP12821 1306 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 TTC21AQ8NDW8 1320 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 FOSBP53539 338 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 CTC1Q2NKJ3 1217 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 GRIPAP1Q4V328 841 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 FBXO22Q8NEZ5 403 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 CDK19Q9BWU1 502 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 LAS1LQ9Y4W2 734 aaKnown RBP3.62□□□□□ -1.83
PRPF39-206ENST00000554429 TAF1LQ8IZX4 1826 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 KIF13BQ9NQT8 1826 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 PLEKHG2Q9H7P9 1386 aa3.62□□□□□ -1.83
PRPF39-206ENST00000554429 NLRP13Q86W25 1043 aa3.61□□□□□ -1.83
PRPF39-206ENST00000554429 ZNF454Q8N9F8 522 aa3.61□□□□□ -1.83
PRPF39-206ENST00000554429 PMFBP1Q8TBY8 1022 aa3.61□□□□□ -1.83
PRPF39-206ENST00000554429 IPO4Q8TEX9 1081 aaKnown RBP3.61□□□□□ -1.83
PRPF39-206ENST00000554429 SGSM3Q96HU1 749 aa3.61□□□□□ -1.83
PRPF39-206ENST00000554429 PSMG3-AS1Q96PY0 264 aa3.61□□□□□ -1.83
PRPF39-206ENST00000554429 DNAJC2Q99543 621 aaKnown RBP3.61□□□□□ -1.83
PRPF39-206ENST00000554429 WDR17Q8IZU2 1322 aa3.61□□□□□ -1.83
PRPF39-206ENST00000554429 CD163L1Q9NR16 1453 aa3.61□□□□□ -1.83
PRPF39-206ENST00000554429 UNCXA6NJT0 531 aa3.61□□□□□ -1.83
PRPF39-206ENST00000554429 MAFGO15525 162 aa3.61□□□□□ -1.83
PRPF39-206ENST00000554429 R3HDM1Q15032 1099 aaKnown RBP3.61□□□□□ -1.83
PRPF39-206ENST00000554429 NGDNQ8NEJ9 315 aaKnown RBP3.61□□□□□ -1.83
PRPF39-206ENST00000554429 SLC16A10Q8TF71 515 aa3.61□□□□□ -1.83
PRPF39-206ENST00000554429 CARD10Q9BWT7 1032 aa3.61□□□□□ -1.83
PRPF39-206ENST00000554429 SPON1Q9HCB6 807 aa3.61□□□□□ -1.83
PRPF39-206ENST00000554429 RIPOR2Q9Y4F9 1068 aa3.61□□□□□ -1.83
PRPF39-206ENST00000554429 PKD1L3Q7Z443 1732 aa3.61□□□□□ -1.83
PRPF39-206ENST00000554429 MINK1Q8N4C8 1332 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-206ENST00000554429 GCP02774 474 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 ZNF598Q86UK7 904 aaKnown RBP3.6□□□□□ -1.83
PRPF39-206ENST00000554429 EXOC8Q8IYI6 725 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 ZFRQ96KR1 1074 aaKnown RBP3.6□□□□□ -1.83
PRPF39-206ENST00000554429 KRTAP9-2Q9BYQ4 174 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 TRAK1Q9UPV9 953 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 DOT1LQ8TEK3 1739 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 C5P01031 1676 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 CENPJQ9HC77 1338 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-206ENST00000554429 NUTM2FA1L443 756 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 PATL2C9JE40 543 aaKnown RBP3.6□□□□□ -1.83
PRPF39-206ENST00000554429 TRIM37O94972 964 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 APBA3O96018 575 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 SMCPP49901 116 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-206ENST00000554429 ERICH6BQ5W0A0 696 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 LARP1Q6PKG0 1096 aaKnown RBP3.6□□□□□ -1.83
PRPF39-206ENST00000554429 ARHGEF25Q86VW2 580 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 NPAS3Q8IXF0 933 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 TMTC2Q8N394 836 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 KCNH5Q8NCM2 988 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-206ENST00000554429 EP400Q96L91 3159 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 NCAPD2Q15021 1401 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 KIF20BQ96Q89 1820 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-206ENST00000554429 MARCH6O60337 910 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 MCCP23508 829 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 HMGB2P26583 209 aaKnown RBP3.6□□□□□ -1.83
PRPF39-206ENST00000554429 FOXK1P85037 733 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 PDE3BQ13370 1112 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 HSP90AB4PQ58FF6 505 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 KRTAP1-3Q8IUG1 177 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 LRCH3Q96II8 777 aa3.6□□□□□ -1.83
PRPF39-206ENST00000554429 NSD2O96028 1365 aa3.59□□□□□ -1.83
PRPF39-206ENST00000554429 KIAA1551Q9HCM1 1747 aa3.59□□□□□ -1.83
PRPF39-206ENST00000554429 TRIM67Q6ZTA4 783 aa3.59□□□□□ -1.83
PRPF39-206ENST00000554429 DCAF11Q8TEB1 546 aa3.59□□□□□ -1.83
PRPF39-206ENST00000554429 MAP2P11137 1827 aaKnown RBP3.59□□□□□ -1.83
PRPF39-206ENST00000554429 BTBD11A6QL63 1104 aa3.59□□□□□ -1.84
PRPF39-206ENST00000554429 FTSJ3Q8IY81 847 aaKnown RBP3.59□□□□□ -1.84
PRPF39-206ENST00000554429 HS6ST3Q8IZP7 471 aa3.59□□□□□ -1.84
PRPF39-206ENST00000554429 HPS5Q9UPZ3 1129 aa3.59□□□□□ -1.84
PRPF39-206ENST00000554429 TOGARAM1Q9Y4F4 1720 aa3.59□□□□□ -1.84
PRPF39-206ENST00000554429 EDC4Q6P2E9 1401 aaKnown RBP3.59□□□□□ -1.84
PRPF39-206ENST00000554429 RTL1A6NKG5 1358 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 KRTAP9-6A0A140TA67 174 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 AVPP01185 164 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 ABTB2Q8N961 1025 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 ZDHHC16Q969W1 377 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 MTFR1LQ9H019 292 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 UBR3Q6ZT12 1888 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 ITGB4P16144 1822 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 KIF24Q5T7B8 1368 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 RGPD2P0DJD1 1756 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 TTC21BQ7Z4L5 1316 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 EVC2Q86UK5 1308 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 FAM187AA6NFU0 413 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 PTMAP06454 111 aaKnown RBP3.58□□□□□ -1.84
PRPF39-206ENST00000554429 YY1P25490 414 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 EVA1CP58658 441 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 FAM193AP78312 1265 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 CHRNA2Q15822 529 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 TMEM151AQ8N4L1 468 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 MARCH10Q8NA82 808 aaPredicted RBP3.58□□□□□ -1.84
PRPF39-206ENST00000554429 KCNV2Q8TDN2 545 aa3.58□□□□□ -1.84
PRPF39-206ENST00000554429 SENP2Q9HC62 589 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms