RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 APLP1P51693 650 aa13.7□□□□□ -0.22
PTCD2P1-201ENST00000554393 RIPK4P57078 832 aa13.7□□□□□ -0.22
PTCD2P1-201ENST00000554393 BABAM1Q9NWV8 329 aa13.7□□□□□ -0.22
PTCD2P1-201ENST00000554393 ADCY9O60503 1353 aa13.7□□□□□ -0.22
PTCD2P1-201ENST00000554393 CARMIL3Q8ND23 1372 aa13.7□□□□□ -0.22
PTCD2P1-201ENST00000554393 PRAMEF22A3QJZ6 481 aa13.69□□□□□ -0.22
PTCD2P1-201ENST00000554393 CAMTA2O94983 1202 aa13.69□□□□□ -0.22
PTCD2P1-201ENST00000554393 SERPINB2P05120 415 aa13.69□□□□□ -0.22
PTCD2P1-201ENST00000554393 KCNA3P22001 575 aa13.69□□□□□ -0.22
PTCD2P1-201ENST00000554393 DZIP3Q86Y13 1208 aaKnown RBP13.69□□□□□ -0.22
PTCD2P1-201ENST00000554393 DNAJC5GQ8N7S2 189 aa13.69□□□□□ -0.22
PTCD2P1-201ENST00000554393 RUNDC1Q96C34 613 aa13.69□□□□□ -0.22
PTCD2P1-201ENST00000554393 THUMPD2Q9BTF0 503 aaKnown RBP13.69□□□□□ -0.22
PTCD2P1-201ENST00000554393 PIM2Q9P1W9 311 aa13.69□□□□□ -0.22
PTCD2P1-201ENST00000554393 TBC1D2BQ9UPU7 963 aa13.69□□□□□ -0.22
PTCD2P1-201ENST00000554393 ZNF330Q9Y3S2 320 aaPredicted RBP13.69□□□□□ -0.22
PTCD2P1-201ENST00000554393 EIF4A1P60842 406 aaKnown RBP13.68□□□□□ -0.22
PTCD2P1-201ENST00000554393 CLEC4GQ6UXB4 293 aa13.68□□□□□ -0.22
PTCD2P1-201ENST00000554393 MIS18AQ9NYP9 233 aa13.68□□□□□ -0.22
PTCD2P1-201ENST00000554393 BCS1LQ9Y276 419 aa13.68□□□□□ -0.22
PTCD2P1-201ENST00000554393 NUP98P52948 1817 aa13.67□□□□□ -0.22
PTCD2P1-201ENST00000554393 NBPF26B4DH59 902 aa13.67□□□□□ -0.22
PTCD2P1-201ENST00000554393 TBC1D9BQ66K14 1250 aa13.67□□□□□ -0.22
PTCD2P1-201ENST00000554393 NBPF10Q6P3W6 841 aaKnown RBP13.67□□□□□ -0.22
PTCD2P1-201ENST00000554393 NBPF15Q8N660 670 aa13.67□□□□□ -0.22
PTCD2P1-201ENST00000554393 WWC3Q9ULE0 1092 aa13.67□□□□□ -0.22
PTCD2P1-201ENST00000554393 ZNF652Q9Y2D9 606 aa13.67□□□□□ -0.22
PTCD2P1-201ENST00000554393 COL11A2P13942 1736 aaPredicted RBP13.67□□□□□ -0.22
PTCD2P1-201ENST00000554393 PCNTO95613 3336 aa13.67□□□□□ -0.22
PTCD2P1-201ENST00000554393 ERBB4Q15303 1308 aa13.66□□□□□ -0.22
PTCD2P1-201ENST00000554393 ARFGEF2Q9Y6D5 1785 aa13.66□□□□□ -0.22
PTCD2P1-201ENST00000554393 DALRD3Q5D0E6 543 aaKnown RBP13.66□□□□□ -0.22
PTCD2P1-201ENST00000554393 SETDB2Q96T68 719 aa13.66□□□□□ -0.22
PTCD2P1-201ENST00000554393 TSPYL4Q9UJ04 414 aa13.66□□□□□ -0.22
PTCD2P1-201ENST00000554393 ADAMTS8Q9UP79 889 aa13.66□□□□□ -0.22
PTCD2P1-201ENST00000554393 PDZRN3Q9UPQ7 1066 aa13.66□□□□□ -0.22
PTCD2P1-201ENST00000554393 SBF1O95248 1867 aa13.65□□□□□ -0.22
PTCD2P1-201ENST00000554393 CHRNA5P30532 468 aa13.65□□□□□ -0.22
PTCD2P1-201ENST00000554393 PIP4K2AP48426 406 aaPredicted RBP13.65□□□□□ -0.22
PTCD2P1-201ENST00000554393 BICDL1Q6ZP65 573 aa13.65□□□□□ -0.22
PTCD2P1-201ENST00000554393 CCDC146Q8IYE0 955 aa13.65□□□□□ -0.22
PTCD2P1-201ENST00000554393 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
PTCD2P1-201ENST00000554393 ZNF316A6NFI3 1004 aaPredicted RBP13.64□□□□□ -0.23
PTCD2P1-201ENST00000554393 PRR5LQ6MZQ0 368 aa13.64□□□□□ -0.23
PTCD2P1-201ENST00000554393 SPDYE1Q8NFV5 336 aaPredicted RBP13.64□□□□□ -0.23
PTCD2P1-201ENST00000554393 BRIP1Q9BX63 1249 aa13.64□□□□□ -0.23
PTCD2P1-201ENST00000554393 PDE6BP35913 854 aa13.63□□□□□ -0.23
PTCD2P1-201ENST00000554393 CNBD1Q8NA66 436 aa13.63□□□□□ -0.23
PTCD2P1-201ENST00000554393 ZNF526Q8TF50 670 aaPredicted RBP13.63□□□□□ -0.23
PTCD2P1-201ENST00000554393 TRIM35Q9UPQ4 493 aa13.63□□□□□ -0.23
PTCD2P1-201ENST00000554393 RRP7AQ9Y3A4 280 aaKnown RBP13.63□□□□□ -0.23
PTCD2P1-201ENST00000554393 CACNA1SQ13698 1873 aa13.62□□□□□ -0.23
PTCD2P1-201ENST00000554393 ERVV-1B6SEH8 477 aa13.62□□□□□ -0.23
PTCD2P1-201ENST00000554393 H0YIN7 160 aa13.62□□□□□ -0.23
PTCD2P1-201ENST00000554393 ARHGAP27Q6ZUM4 889 aa13.62□□□□□ -0.23
PTCD2P1-201ENST00000554393 C2CD5Q86YS7 1000 aa13.62□□□□□ -0.23
PTCD2P1-201ENST00000554393 ANKRD36CQ5JPF3 1778 aa13.61□□□□□ -0.23
PTCD2P1-201ENST00000554393 CHL1O00533 1208 aa13.61□□□□□ -0.23
PTCD2P1-201ENST00000554393 ST5P78524 1137 aa13.61□□□□□ -0.23
PTCD2P1-201ENST00000554393 NEUROD2Q15784 382 aa13.61□□□□□ -0.23
PTCD2P1-201ENST00000554393 TTLL6Q8N841 843 aa13.61□□□□□ -0.23
PTCD2P1-201ENST00000554393 FER1L6Q2WGJ9 1857 aa13.61□□□□□ -0.23
PTCD2P1-201ENST00000554393 MAP3K15Q6ZN16 1313 aa13.61□□□□□ -0.23
PTCD2P1-201ENST00000554393 CCDC88AQ3V6T2 1871 aa13.6□□□□□ -0.23
PTCD2P1-201ENST00000554393 KIF6Q6ZMV9 814 aa13.6□□□□□ -0.23
PTCD2P1-201ENST00000554393 NIP7Q9Y221 180 aaKnown RBP eCLIP13.6□□□□□ -0.23
PTCD2P1-201ENST00000554393 IBTKQ9P2D0 1353 aaPredicted RBP13.59□□□□□ -0.23
PTCD2P1-201ENST00000554393 NPHP1O15259 732 aa13.59□□□□□ -0.23
PTCD2P1-201ENST00000554393 HOXB7P09629 217 aa13.59□□□□□ -0.23
PTCD2P1-201ENST00000554393 TPTE2Q6XPS3 522 aa13.59□□□□□ -0.23
PTCD2P1-201ENST00000554393 NBPF5PQ86XG9 351 aaPredicted RBP13.59□□□□□ -0.23
PTCD2P1-201ENST00000554393 DICER1Q9UPY3 1922 aaKnown RBP13.58□□□□□ -0.23
PTCD2P1-201ENST00000554393 RIC1Q4ADV7 1423 aa13.58□□□□□ -0.24
PTCD2P1-201ENST00000554393 SLX4Q8IY92 1834 aa13.58□□□□□ -0.24
PTCD2P1-201ENST00000554393 MYL6BP14649 208 aa13.58□□□□□ -0.24
PTCD2P1-201ENST00000554393 CALD1Q05682 793 aaKnown RBP13.58□□□□□ -0.24
PTCD2P1-201ENST00000554393 HLFQ16534 295 aa13.58□□□□□ -0.24
PTCD2P1-201ENST00000554393 STYK1Q6J9G0 422 aa13.58□□□□□ -0.24
PTCD2P1-201ENST00000554393 LRP10Q7Z4F1 713 aa13.58□□□□□ -0.24
PTCD2P1-201ENST00000554393 JMYQ8N9B5 988 aa13.58□□□□□ -0.24
PTCD2P1-201ENST00000554393 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
PTCD2P1-201ENST00000554393 TIAM2Q8IVF5 1701 aa13.58□□□□□ -0.24
PTCD2P1-201ENST00000554393 KLRG2A4D1S0 409 aaPredicted RBP13.57□□□□□ -0.24
PTCD2P1-201ENST00000554393 APAF1O14727 1248 aa13.57□□□□□ -0.24
PTCD2P1-201ENST00000554393 SRGNP10124 158 aa13.57□□□□□ -0.24
PTCD2P1-201ENST00000554393 PDIA6Q15084 440 aa13.57□□□□□ -0.24
PTCD2P1-201ENST00000554393 TTLL7Q6ZT98 887 aa13.57□□□□□ -0.24
PTCD2P1-201ENST00000554393 NYXQ9GZU5 481 aa13.57□□□□□ -0.24
PTCD2P1-201ENST00000554393 ZC3H4Q9UPT8 1303 aaKnown RBP13.57□□□□□ -0.24
PTCD2P1-201ENST00000554393 TNRC6CQ9HCJ0 1690 aaKnown RBP13.56□□□□□ -0.24
PTCD2P1-201ENST00000554393 ANP32CO43423 234 aa13.56□□□□□ -0.24
PTCD2P1-201ENST00000554393 ZNF853P0CG23 659 aa13.56□□□□□ -0.24
PTCD2P1-201ENST00000554393 EIF2S2P20042 333 aaKnown RBP13.56□□□□□ -0.24
PTCD2P1-201ENST00000554393 C9orf131Q5VYM1 1079 aa13.56□□□□□ -0.24
PTCD2P1-201ENST00000554393 GIGYF2Q6Y7W6 1299 aaKnown RBP13.56□□□□□ -0.24
PTCD2P1-201ENST00000554393 NGEFQ8N5V2 710 aa13.56□□□□□ -0.24
PTCD2P1-201ENST00000554393 CNKSR1Q969H4 720 aa13.56□□□□□ -0.24
PTCD2P1-201ENST00000554393 ZNF622Q969S3 477 aaKnown RBP eCLIP13.56□□□□□ -0.24
PTCD2P1-201ENST00000554393 KLRG1Q96E93 195 aa13.56□□□□□ -0.24
PTCD2P1-201ENST00000554393 MASTLQ96GX5 879 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms