RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 GPATCH8Q9UKJ3 1502 aaKnown RBP9.21□□□□□ -0.94
ATXN3-226ENST00000554350 AHDC1Q5TGY3 1603 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-226ENST00000554350 KDM5AP29375 1690 aaKnown RBP9.2□□□□□ -0.94
ATXN3-226ENST00000554350 SLC24A1O60721 1099 aa9.2□□□□□ -0.94
ATXN3-226ENST00000554350 ATF3P18847 181 aa9.2□□□□□ -0.94
ATXN3-226ENST00000554350 RAB15P59190 212 aa9.2□□□□□ -0.94
ATXN3-226ENST00000554350 DEFB132Q7Z7B7 95 aa9.2□□□□□ -0.94
ATXN3-226ENST00000554350 DZIP3Q86Y13 1208 aaKnown RBP9.2□□□□□ -0.94
ATXN3-226ENST00000554350 RNF217Q8TC41 542 aa9.2□□□□□ -0.94
ATXN3-226ENST00000554350 NANOS1Q8WY41 292 aaKnown RBP9.2□□□□□ -0.94
ATXN3-226ENST00000554350 PCMTD1Q96MG8 357 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-226ENST00000554350 CCNB3Q8WWL7 1395 aa9.2□□□□□ -0.94
ATXN3-226ENST00000554350 NWD1Q149M9 1564 aa9.2□□□□□ -0.94
ATXN3-226ENST00000554350 ADH1AP07327 375 aa9.19□□□□□ -0.94
ATXN3-226ENST00000554350 TMEM259Q4ZIN3 620 aa9.19□□□□□ -0.94
ATXN3-226ENST00000554350 FOXD4L5Q5VV16 416 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-226ENST00000554350 PNMA1Q8ND90 353 aa9.19□□□□□ -0.94
ATXN3-226ENST00000554350 IL27Q8NEV9 243 aa9.19□□□□□ -0.94
ATXN3-226ENST00000554350 ZNF395Q9H8N7 513 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-226ENST00000554350 USP21Q9UK80 565 aa9.19□□□□□ -0.94
ATXN3-226ENST00000554350 TRPC5Q9UL62 973 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-226ENST00000554350 CCDC18Q5T9S5 1454 aa9.19□□□□□ -0.94
ATXN3-226ENST00000554350 GPR37L1O60883 481 aa9.18□□□□□ -0.94
ATXN3-226ENST00000554350 UBTFP17480 764 aaKnown RBP9.18□□□□□ -0.94
ATXN3-226ENST00000554350 NEUROD2Q15784 382 aa9.18□□□□□ -0.94
ATXN3-226ENST00000554350 ZNF644Q9H582 1327 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-226ENST00000554350 DIP2AQ14689 1571 aa9.17□□□□□ -0.94
ATXN3-226ENST00000554350 RTEL1-TNFRSF6BF6WH68 1400 aa9.17□□□□□ -0.94
ATXN3-226ENST00000554350 TMEM2Q9UHN6 1383 aa9.17□□□□□ -0.94
ATXN3-226ENST00000554350 ARHGAP35Q9NRY4 1499 aa9.16□□□□□ -0.94
ATXN3-226ENST00000554350 BLMP54132 1417 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-226ENST00000554350 FBXO45P0C2W1 286 aa9.16□□□□□ -0.94
ATXN3-226ENST00000554350 PTGIRP43119 386 aa9.16□□□□□ -0.94
ATXN3-226ENST00000554350 BRPF1P55201 1214 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-226ENST00000554350 RNFT1Q5M7Z0 435 aa9.16□□□□□ -0.94
ATXN3-226ENST00000554350 BRINP3Q76B58 766 aa9.16□□□□□ -0.94
ATXN3-226ENST00000554350 ZBBXA8MT70 800 aa9.15□□□□□ -0.94
ATXN3-226ENST00000554350 ITGA6P23229 1130 aa9.15□□□□□ -0.94
ATXN3-226ENST00000554350 SEPT12Q8IYM1 358 aa9.15□□□□□ -0.94
ATXN3-226ENST00000554350 LRRC59Q96AG4 307 aaKnown RBP9.15□□□□□ -0.94
ATXN3-226ENST00000554350 CNTNAP3BQ96NU0 1288 aa9.15□□□□□ -0.94
ATXN3-226ENST00000554350 COL25A1Q9BXS0 654 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-226ENST00000554350 CNTNAP3Q9BZ76 1288 aa9.15□□□□□ -0.94
ATXN3-226ENST00000554350 POLMQ9NP87 494 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-226ENST00000554350 NHSL1Q5SYE7 1610 aa9.15□□□□□ -0.94
ATXN3-226ENST00000554350 GIGYF1O75420 1035 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-226ENST00000554350 GSK3AP49840 483 aa9.14□□□□□ -0.95
ATXN3-226ENST00000554350 CYLDQ9NQC7 956 aa9.14□□□□□ -0.95
ATXN3-226ENST00000554350 C19orf44Q9H6X5 657 aa9.13□□□□□ -0.95
ATXN3-226ENST00000554350 PIK3C2BO00750 1634 aa9.13□□□□□ -0.95
ATXN3-226ENST00000554350 VWA5B2Q8N398 1253 aa9.12□□□□□ -0.95
ATXN3-226ENST00000554350 EP400Q96L91 3159 aa9.12□□□□□ -0.95
ATXN3-226ENST00000554350 TET3O43151 1660 aa9.12□□□□□ -0.95
ATXN3-226ENST00000554350 SETD5Q9C0A6 1442 aa9.12□□□□□ -0.95
ATXN3-226ENST00000554350 MAST1Q9Y2H9 1570 aa9.12□□□□□ -0.95
ATXN3-226ENST00000554350 PNPLA6Q8IY17 1366 aa9.12□□□□□ -0.95
ATXN3-226ENST00000554350 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-226ENST00000554350 MBD5Q9P267 1494 aa9.11□□□□□ -0.95
ATXN3-226ENST00000554350 PPP1R15AO75807 674 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-226ENST00000554350 MTMR14Q8NCE2 650 aa9.11□□□□□ -0.95
ATXN3-226ENST00000554350 DDX17Q92841 729 aaKnown RBP9.11□□□□□ -0.95
ATXN3-226ENST00000554350 CUEDC1Q9NWM3 386 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-226ENST00000554350 PCDHB9Q9Y5E1 797 aa9.11□□□□□ -0.95
ATXN3-226ENST00000554350 CEP152O94986 1710 aa9.11□□□□□ -0.95
ATXN3-226ENST00000554350 EFCAB6Q5THR3 1501 aa9.1□□□□□ -0.95
ATXN3-226ENST00000554350 ASXL1Q8IXJ9 1541 aa9.1□□□□□ -0.95
ATXN3-226ENST00000554350 R3HDM1Q15032 1099 aaKnown RBP9.1□□□□□ -0.95
ATXN3-226ENST00000554350 ATRNO75882 1429 aa9.1□□□□□ -0.95
ATXN3-226ENST00000554350 EEA1Q15075 1411 aa9.1□□□□□ -0.95
ATXN3-226ENST00000554350 CASKIN1Q8WXD9 1431 aa9.1□□□□□ -0.95
ATXN3-226ENST00000554350 CCDC141Q6ZP82 1450 aa9.09□□□□□ -0.95
ATXN3-226ENST00000554350 RNF144AP50876 292 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-226ENST00000554350 ZNF385CQ66K41 422 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-226ENST00000554350 NCOA3Q9Y6Q9 1424 aa9.08□□□□□ -0.96
ATXN3-226ENST00000554350 TSPY4P0CV99 314 aa9.08□□□□□ -0.96
ATXN3-226ENST00000554350 TSPY10P0CW01 314 aa9.08□□□□□ -0.96
ATXN3-226ENST00000554350 SLURP2P0DP57 97 aa9.08□□□□□ -0.96
ATXN3-226ENST00000554350 BAG6P46379 1132 aa9.08□□□□□ -0.96
ATXN3-226ENST00000554350 ERVK-9P63128 1117 aa9.08□□□□□ -0.96
ATXN3-226ENST00000554350 LYSMD3Q7Z3D4 306 aa9.08□□□□□ -0.96
ATXN3-226ENST00000554350 WHAMMQ8TF30 809 aa9.08□□□□□ -0.96
ATXN3-226ENST00000554350 CHD2O14647 1828 aaKnown RBP9.08□□□□□ -0.96
ATXN3-226ENST00000554350 MROH1Q8NDA8 1641 aa9.07□□□□□ -0.96
ATXN3-226ENST00000554350 CDC14CA4D256 554 aa9.07□□□□□ -0.96
ATXN3-226ENST00000554350 C1QTNF8P60827 252 aa9.07□□□□□ -0.96
ATXN3-226ENST00000554350 NR1H3Q13133 447 aa9.07□□□□□ -0.96
ATXN3-226ENST00000554350 SV2AQ7L0J3 742 aa9.07□□□□□ -0.96
ATXN3-226ENST00000554350 FNBP4Q8N3X1 1017 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-226ENST00000554350 BANK1Q8NDB2 785 aa9.07□□□□□ -0.96
ATXN3-226ENST00000554350 MTUS2Q5JR59 1369 aa9.07□□□□□ -0.96
ATXN3-226ENST00000554350 BCL9LQ86UU0 1499 aa9.07□□□□□ -0.96
ATXN3-226ENST00000554350 ATP5J2-PTCD1G3V325 749 aa9.06□□□□□ -0.96
ATXN3-226ENST00000554350 SCTRP47872 440 aa9.06□□□□□ -0.96
ATXN3-226ENST00000554350 KCNMA1Q12791 1236 aa9.06□□□□□ -0.96
ATXN3-226ENST00000554350 IDI1Q13907 227 aa9.06□□□□□ -0.96
ATXN3-226ENST00000554350 SNRKQ9NRH2 765 aa9.06□□□□□ -0.96
ATXN3-226ENST00000554350 PPP1R1BQ9UD71 204 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-226ENST00000554350 CAMSAP2Q08AD1 1489 aa9.06□□□□□ -0.96
ATXN3-226ENST00000554350 RHOQP17081 205 aa9.05□□□□□ -0.96
ATXN3-226ENST00000554350 GAS6Q14393 721 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms