RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 NBPF5PQ86XG9 351 aaPredicted RBP14.15□□□□□ -0.14
PNN-203ENST00000554117 CNKSR1Q969H4 720 aa14.15□□□□□ -0.14
PNN-203ENST00000554117 BCL2L12Q9HB09 334 aa14.15□□□□□ -0.14
PNN-203ENST00000554117 DPY19L2Q6NUT2 758 aa14.14□□□□□ -0.15
PNN-203ENST00000554117 TPTE2Q6XPS3 522 aa14.14□□□□□ -0.15
PNN-203ENST00000554117 USP16Q9Y5T5 823 aa14.14□□□□□ -0.15
PNN-203ENST00000554117 RGL2O15211 777 aa14.13□□□□□ -0.15
PNN-203ENST00000554117 KCNQ3O43525 872 aa14.13□□□□□ -0.15
PNN-203ENST00000554117 CAMTA2O94983 1202 aa14.13□□□□□ -0.15
PNN-203ENST00000554117 APLP1P51693 650 aa14.13□□□□□ -0.15
PNN-203ENST00000554117 WDR43Q15061 677 aaKnown RBP eCLIP14.13□□□□□ -0.15
PNN-203ENST00000554117 PRR5LQ6MZQ0 368 aa14.13□□□□□ -0.15
PNN-203ENST00000554117 LAMB2P55268 1798 aa14.12□□□□□ -0.15
PNN-203ENST00000554117 KIF3CO14782 793 aa14.12□□□□□ -0.15
PNN-203ENST00000554117 MASTLQ96GX5 879 aa14.12□□□□□ -0.15
PNN-203ENST00000554117 NYXQ9GZU5 481 aa14.12□□□□□ -0.15
PNN-203ENST00000554117 NIP7Q9Y221 180 aaKnown RBP eCLIP14.12□□□□□ -0.15
PNN-203ENST00000554117 STYK1Q6J9G0 422 aa14.11□□□□□ -0.15
PNN-203ENST00000554117 MYBBP1AQ9BQG0 1328 aaKnown RBP14.11□□□□□ -0.15
PNN-203ENST00000554117 PIP4K2AP48426 406 aaPredicted RBP14.1□□□□□ -0.15
PNN-203ENST00000554117 RASSF7Q02833 373 aa14.1□□□□□ -0.15
PNN-203ENST00000554117 RBM46Q8TBY0 533 aaKnown RBP14.1□□□□□ -0.15
PNN-203ENST00000554117 NMRK2Q9NPI5 230 aa14.1□□□□□ -0.15
PNN-203ENST00000554117 ZNF219Q9P2Y4 722 aaPredicted RBP14.1□□□□□ -0.15
PNN-203ENST00000554117 TSPYL4Q9UJ04 414 aa14.1□□□□□ -0.15
PNN-203ENST00000554117 CACNA1FO60840 1977 aa14.09□□□□□ -0.15
PNN-203ENST00000554117 C21orf2O43822 256 aa14.09□□□□□ -0.15
PNN-203ENST00000554117 ALDH1B1P30837 517 aa14.09□□□□□ -0.15
PNN-203ENST00000554117 RIPK4P57078 832 aa14.09□□□□□ -0.15
PNN-203ENST00000554117 FSTL1Q12841 308 aa14.09□□□□□ -0.15
PNN-203ENST00000554117 DDX10Q13206 875 aaKnown RBP14.09□□□□□ -0.15
PNN-203ENST00000554117 NGEFQ8N5V2 710 aa14.09□□□□□ -0.15
PNN-203ENST00000554117 TMX4Q9H1E5 349 aaPredicted RBP14.09□□□□□ -0.15
PNN-203ENST00000554117 TAOK3Q9H2K8 898 aa14.09□□□□□ -0.15
PNN-203ENST00000554117 RRAGCQ9HB90 399 aa14.09□□□□□ -0.15
PNN-203ENST00000554117 MIS18AQ9NYP9 233 aa14.09□□□□□ -0.15
PNN-203ENST00000554117 RRP7AQ9Y3A4 280 aaKnown RBP14.09□□□□□ -0.15
PNN-203ENST00000554117 ERBB4Q15303 1308 aa14.09□□□□□ -0.15
PNN-203ENST00000554117 PRAMEF22A3QJZ6 481 aa14.08□□□□□ -0.16
PNN-203ENST00000554117 FAM177BA6PVY3 158 aa14.08□□□□□ -0.16
PNN-203ENST00000554117 NPR1P16066 1061 aa14.08□□□□□ -0.16
PNN-203ENST00000554117 CCDC24Q8N4L8 307 aa14.08□□□□□ -0.16
PNN-203ENST00000554117 PLEKHF1Q96S99 279 aa14.08□□□□□ -0.16
PNN-203ENST00000554117 BABAM1Q9NWV8 329 aa14.08□□□□□ -0.16
PNN-203ENST00000554117 GLTPD2A6NH11 291 aa14.07□□□□□ -0.16
PNN-203ENST00000554117 ERVV-1B6SEH8 477 aa14.07□□□□□ -0.16
PNN-203ENST00000554117 MYL6BP14649 208 aa14.07□□□□□ -0.16
PNN-203ENST00000554117 VEGFAP15692 232 aaPredicted RBP14.07□□□□□ -0.16
PNN-203ENST00000554117 ERFEQ4G0M1 354 aa14.07□□□□□ -0.16
PNN-203ENST00000554117 SMC1BQ8NDV3 1235 aa14.07□□□□□ -0.16
PNN-203ENST00000554117 SRGNP10124 158 aa14.06□□□□□ -0.16
PNN-203ENST00000554117 EIF4A1P60842 406 aaKnown RBP14.06□□□□□ -0.16
PNN-203ENST00000554117 CCDC93Q567U6 631 aa14.06□□□□□ -0.16
PNN-203ENST00000554117 PRPF40BQ6NWY9 871 aaKnown RBP14.06□□□□□ -0.16
PNN-203ENST00000554117 PPP1R42Q7Z4L9 355 aa14.06□□□□□ -0.16
PNN-203ENST00000554117 RPGRQ92834 1020 aaKnown RBP14.06□□□□□ -0.16
PNN-203ENST00000554117 MAP3K15Q6ZN16 1313 aa14.06□□□□□ -0.16
PNN-203ENST00000554117 LTBP3Q9NS15 1303 aa14.06□□□□□ -0.16
PNN-203ENST00000554117 MYH3P11055 1940 aa14.05□□□□□ -0.16
PNN-203ENST00000554117 NBPF26B4DH59 902 aa14.04□□□□□ -0.16
PNN-203ENST00000554117 EIF2S2P20042 333 aaKnown RBP14.04□□□□□ -0.16
PNN-203ENST00000554117 TMPOP42166 694 aaKnown RBP14.04□□□□□ -0.16
PNN-203ENST00000554117 NEUROD2Q15784 382 aa14.04□□□□□ -0.16
PNN-203ENST00000554117 NBPF10Q6P3W6 841 aaKnown RBP14.04□□□□□ -0.16
PNN-203ENST00000554117 RTKN2Q8IZC4 609 aa14.04□□□□□ -0.16
PNN-203ENST00000554117 NBPF15Q8N660 670 aa14.04□□□□□ -0.16
PNN-203ENST00000554117 RUNDC1Q96C34 613 aa14.04□□□□□ -0.16
PNN-203ENST00000554117 NFKBIEO00221 500 aa14.03□□□□□ -0.16
PNN-203ENST00000554117 GRIPAP1Q4V328 841 aa14.03□□□□□ -0.16
PNN-203ENST00000554117 HSP90AB3PQ58FF7 597 aa14.03□□□□□ -0.16
PNN-203ENST00000554117 THUMPD2Q9BTF0 503 aaKnown RBP14.03□□□□□ -0.16
PNN-203ENST00000554117 LAS1LQ9Y4W2 734 aaKnown RBP14.03□□□□□ -0.16
PNN-203ENST00000554117 IBTKQ9P2D0 1353 aaPredicted RBP14.03□□□□□ -0.16
PNN-203ENST00000554117 TRPM7Q96QT4 1865 aa14.03□□□□□ -0.16
PNN-203ENST00000554117 TAF1P21675 1872 aa14.02□□□□□ -0.16
PNN-203ENST00000554117 IQCA1LA6NCM1 817 aa14.02□□□□□ -0.17
PNN-203ENST00000554117 PARP10Q53GL7 1025 aa14.02□□□□□ -0.17
PNN-203ENST00000554117 ZBTB3Q9H5J0 574 aa14.02□□□□□ -0.17
PNN-203ENST00000554117 DDX60Q8IY21 1712 aaKnown RBP14.01□□□□□ -0.17
PNN-203ENST00000554117 RIC1Q4ADV7 1423 aa14.01□□□□□ -0.17
PNN-203ENST00000554117 CALD1Q05682 793 aaKnown RBP14.01□□□□□ -0.17
PNN-203ENST00000554117 HLFQ16534 295 aa14.01□□□□□ -0.17
PNN-203ENST00000554117 CC2D2BQ6DHV5 1058 aa14.01□□□□□ -0.17
PNN-203ENST00000554117 CCDC146Q8IYE0 955 aa14.01□□□□□ -0.17
PNN-203ENST00000554117 RBM17Q96I25 401 aaKnown RBP14.01□□□□□ -0.17
PNN-203ENST00000554117 GPTP24298 496 aa14□□□□□ -0.17
PNN-203ENST00000554117 FKBP4Q02790 459 aaKnown RBP eCLIP14□□□□□ -0.17
PNN-203ENST00000554117 GIGYF2Q6Y7W6 1299 aaKnown RBP14□□□□□ -0.17
PNN-203ENST00000554117 JDP2Q8WYK2 163 aa14□□□□□ -0.17
PNN-203ENST00000554117 NLRP3Q96P20 1036 aa14□□□□□ -0.17
PNN-203ENST00000554117 CHMP4AQ9BY43 222 aa14□□□□□ -0.17
PNN-203ENST00000554117 RNF123Q5XPI4 1314 aa13.99□□□□□ -0.17
PNN-203ENST00000554117 KLRG2A4D1S0 409 aaPredicted RBP13.98□□□□□ -0.17
PNN-203ENST00000554117 ZEB1P37275 1124 aaPredicted RBP13.98□□□□□ -0.17
PNN-203ENST00000554117 TTLL7Q6ZT98 887 aa13.98□□□□□ -0.17
PNN-203ENST00000554117 NUTM1Q86Y26 1132 aa13.98□□□□□ -0.17
PNN-203ENST00000554117 SPEF2Q9C093 1822 aa13.98□□□□□ -0.17
PNN-203ENST00000554117 AIMP1Q12904 312 aaKnown RBP13.97□□□□□ -0.17
PNN-203ENST00000554117 UTP14AQ9BVJ6 771 aaKnown RBP13.97□□□□□ -0.17
PNN-203ENST00000554117 HOXB7P09629 217 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms