RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 NGEFQ8N5V2 710 aa8.53□□□□□ -1.04
FOXN3-205ENST00000553904 CHMP4AQ9BY43 222 aa8.53□□□□□ -1.04
FOXN3-205ENST00000553904 TMX4Q9H1E5 349 aaPredicted RBP8.53□□□□□ -1.04
FOXN3-205ENST00000553904 TJP1Q07157 1748 aa8.53□□□□□ -1.04
FOXN3-205ENST00000553904 NBPF26B4DH59 902 aa8.52□□□□□ -1.05
FOXN3-205ENST00000553904 KIF3CO14782 793 aa8.52□□□□□ -1.05
FOXN3-205ENST00000553904 C21orf2O43822 256 aa8.52□□□□□ -1.05
FOXN3-205ENST00000553904 MYL6BP14649 208 aa8.52□□□□□ -1.05
FOXN3-205ENST00000553904 CALD1Q05682 793 aaKnown RBP8.52□□□□□ -1.05
FOXN3-205ENST00000553904 FSTL1Q12841 308 aa8.52□□□□□ -1.05
FOXN3-205ENST00000553904 NEUROD2Q15784 382 aa8.52□□□□□ -1.05
FOXN3-205ENST00000553904 GRIPAP1Q4V328 841 aa8.52□□□□□ -1.05
FOXN3-205ENST00000553904 NBPF10Q6P3W6 841 aaKnown RBP8.52□□□□□ -1.05
FOXN3-205ENST00000553904 PPP1R42Q7Z4L9 355 aa8.52□□□□□ -1.05
FOXN3-205ENST00000553904 NBPF15Q8N660 670 aa8.52□□□□□ -1.05
FOXN3-205ENST00000553904 GLTPD2A6NH11 291 aa8.51□□□□□ -1.05
FOXN3-205ENST00000553904 VEGFAP15692 232 aaPredicted RBP8.51□□□□□ -1.05
FOXN3-205ENST00000553904 EIF2S2P20042 333 aaKnown RBP8.51□□□□□ -1.05
FOXN3-205ENST00000553904 APLP1P51693 650 aa8.51□□□□□ -1.05
FOXN3-205ENST00000553904 ERFEQ4G0M1 354 aa8.51□□□□□ -1.05
FOXN3-205ENST00000553904 RTKN2Q8IZC4 609 aa8.51□□□□□ -1.05
FOXN3-205ENST00000553904 RBM46Q8TBY0 533 aaKnown RBP8.51□□□□□ -1.05
FOXN3-205ENST00000553904 THUMPD2Q9BTF0 503 aaKnown RBP8.51□□□□□ -1.05
FOXN3-205ENST00000553904 RRAGCQ9HB90 399 aa8.51□□□□□ -1.05
FOXN3-205ENST00000553904 KIF13BQ9NQT8 1826 aa8.51□□□□□ -1.05
FOXN3-205ENST00000553904 MAP3K15Q6ZN16 1313 aa8.51□□□□□ -1.05
FOXN3-205ENST00000553904 KLRG2A4D1S0 409 aaPredicted RBP8.5□□□□□ -1.05
FOXN3-205ENST00000553904 FAM177BA6PVY3 158 aa8.5□□□□□ -1.05
FOXN3-205ENST00000553904 HLFQ16534 295 aa8.5□□□□□ -1.05
FOXN3-205ENST00000553904 PARP10Q53GL7 1025 aa8.5□□□□□ -1.05
FOXN3-205ENST00000553904 HSP90AB3PQ58FF7 597 aa8.5□□□□□ -1.05
FOXN3-205ENST00000553904 CC2D2BQ6DHV5 1058 aa8.5□□□□□ -1.05
FOXN3-205ENST00000553904 PRPF40BQ6NWY9 871 aaKnown RBP8.5□□□□□ -1.05
FOXN3-205ENST00000553904 CCDC24Q8N4L8 307 aa8.5□□□□□ -1.05
FOXN3-205ENST00000553904 TAOK3Q9H2K8 898 aa8.5□□□□□ -1.05
FOXN3-205ENST00000553904 PRKRIP1Q9H875 184 aaPredicted RBP8.5□□□□□ -1.05
FOXN3-205ENST00000553904 NMRK2Q9NPI5 230 aa8.5□□□□□ -1.05
FOXN3-205ENST00000553904 ADAMTS8Q9UP79 889 aa8.5□□□□□ -1.05
FOXN3-205ENST00000553904 LAS1LQ9Y4W2 734 aaKnown RBP8.5□□□□□ -1.05
FOXN3-205ENST00000553904 LTBP3Q9NS15 1303 aa8.5□□□□□ -1.05
FOXN3-205ENST00000553904 UBR2Q8IWV8 1755 aa8.49□□□□□ -1.05
FOXN3-205ENST00000553904 CHL1O00533 1208 aa8.49□□□□□ -1.05
FOXN3-205ENST00000553904 CCDC93Q567U6 631 aa8.49□□□□□ -1.05
FOXN3-205ENST00000553904 GIGYF2Q6Y7W6 1299 aaKnown RBP8.49□□□□□ -1.05
FOXN3-205ENST00000553904 SMC1BQ8NDV3 1235 aa8.49□□□□□ -1.05
FOXN3-205ENST00000553904 RPGRQ92834 1020 aaKnown RBP8.49□□□□□ -1.05
FOXN3-205ENST00000553904 NLRP3Q96P20 1036 aa8.49□□□□□ -1.05
FOXN3-205ENST00000553904 ZNF219Q9P2Y4 722 aaPredicted RBP8.49□□□□□ -1.05
FOXN3-205ENST00000553904 N4BP2Q86UW6 1770 aaPredicted RBP8.48□□□□□ -1.05
FOXN3-205ENST00000553904 HOXB7P09629 217 aa8.48□□□□□ -1.05
FOXN3-205ENST00000553904 RASSF7Q02833 373 aa8.48□□□□□ -1.05
FOXN3-205ENST00000553904 TTLL7Q6ZT98 887 aa8.48□□□□□ -1.05
FOXN3-205ENST00000553904 CCDC146Q8IYE0 955 aa8.48□□□□□ -1.05
FOXN3-205ENST00000553904 ZNF34Q8IZ26 560 aa8.48□□□□□ -1.05
FOXN3-205ENST00000553904 RBM17Q96I25 401 aaKnown RBP8.48□□□□□ -1.05
FOXN3-205ENST00000553904 CFAP44Q96MT7 982 aa8.48□□□□□ -1.05
FOXN3-205ENST00000553904 ZBTB3Q9H5J0 574 aa8.48□□□□□ -1.05
FOXN3-205ENST00000553904 NFKBIEO00221 500 aa8.47□□□□□ -1.05
FOXN3-205ENST00000553904 FKBP4Q02790 459 aaKnown RBP eCLIP8.47□□□□□ -1.05
FOXN3-205ENST00000553904 AIMP1Q12904 312 aaKnown RBP8.47□□□□□ -1.05
FOXN3-205ENST00000553904 COPS6Q7L5N1 327 aa8.47□□□□□ -1.05
FOXN3-205ENST00000553904 JDP2Q8WYK2 163 aa8.47□□□□□ -1.05
FOXN3-205ENST00000553904 CRAMP1Q96RY5 1269 aa8.47□□□□□ -1.05
FOXN3-205ENST00000553904 UTP14AQ9BVJ6 771 aaKnown RBP8.47□□□□□ -1.05
FOXN3-205ENST00000553904 DDX21Q9NR30 783 aaKnown RBP eCLIP8.47□□□□□ -1.05
FOXN3-205ENST00000553904 DBF4Q9UBU7 674 aaPredicted RBP8.47□□□□□ -1.05
FOXN3-205ENST00000553904 RNF123Q5XPI4 1314 aa8.47□□□□□ -1.05
FOXN3-205ENST00000553904 SIPA1L3O60292 1781 aaPredicted RBP8.46□□□□□ -1.05
FOXN3-205ENST00000553904 IQCA1LA6NCM1 817 aa8.46□□□□□ -1.06
FOXN3-205ENST00000553904 HSP90B1P14625 803 aaKnown RBP8.46□□□□□ -1.06
FOXN3-205ENST00000553904 GPTP24298 496 aa8.46□□□□□ -1.06
FOXN3-205ENST00000553904 GNAI1P63096 354 aa8.46□□□□□ -1.06
FOXN3-205ENST00000553904 SLC10A5Q5PT55 438 aa8.46□□□□□ -1.06
FOXN3-205ENST00000553904 SUSD4Q5VX71 490 aa8.46□□□□□ -1.06
FOXN3-205ENST00000553904 ANKRD13DQ6ZTN6 518 aa8.46□□□□□ -1.06
FOXN3-205ENST00000553904 C7orf43Q8WVR3 580 aa8.46□□□□□ -1.06
FOXN3-205ENST00000553904 VPS33BQ9H267 617 aa8.46□□□□□ -1.06
FOXN3-205ENST00000553904 HYPKQ9NX55 129 aa8.46□□□□□ -1.06
FOXN3-205ENST00000553904 TRIM35Q9UPQ4 493 aa8.46□□□□□ -1.06
FOXN3-205ENST00000553904 IBTKQ9P2D0 1353 aaPredicted RBP8.46□□□□□ -1.06
FOXN3-205ENST00000553904 NRXN2Q9P2S2 1712 aa8.46□□□□□ -1.06
FOXN3-205ENST00000553904 APAF1O14727 1248 aa8.45□□□□□ -1.06
FOXN3-205ENST00000553904 BBOX1O75936 387 aa8.45□□□□□ -1.06
FOXN3-205ENST00000553904 HOXA10P31260 410 aaPredicted RBP8.45□□□□□ -1.06
FOXN3-205ENST00000553904 TCIRG1Q13488 830 aa8.45□□□□□ -1.06
FOXN3-205ENST00000553904 PDIA6Q15084 440 aa8.45□□□□□ -1.06
FOXN3-205ENST00000553904 CRY2Q49AN0 593 aa8.45□□□□□ -1.06
FOXN3-205ENST00000553904 HDGFL1Q5TGJ6 251 aa8.45□□□□□ -1.06
FOXN3-205ENST00000553904 NUTM1Q86Y26 1132 aa8.45□□□□□ -1.06
FOXN3-205ENST00000553904 SYNE4Q8N205 404 aa8.45□□□□□ -1.06
FOXN3-205ENST00000553904 PLBD2Q8NHP8 589 aa8.45□□□□□ -1.06
FOXN3-205ENST00000553904 NECTIN2Q92692 538 aa8.45□□□□□ -1.06
FOXN3-205ENST00000553904 PSMD1Q99460 953 aa8.45□□□□□ -1.06
FOXN3-205ENST00000553904 IFT57Q9NWB7 429 aa8.45□□□□□ -1.06
FOXN3-205ENST00000553904 KIAA1551Q9HCM1 1747 aa8.45□□□□□ -1.06
FOXN3-205ENST00000553904 ANP32CO43423 234 aa8.44□□□□□ -1.06
FOXN3-205ENST00000553904 IARSP41252 1262 aaKnown RBP8.44□□□□□ -1.06
FOXN3-205ENST00000553904 EIF6P56537 245 aaKnown RBP8.44□□□□□ -1.06
FOXN3-205ENST00000553904 DUSP27Q5VZP5 1158 aa8.44□□□□□ -1.06
FOXN3-205ENST00000553904 DDX46Q7L014 1031 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms