RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 MAP1SQ66K74 1059 aaPredicted RBP13.19□□□□□ -0.3
CHD8-205ENST00000553651 CNTROBQ8N137 903 aa13.19□□□□□ -0.3
CHD8-205ENST00000553651 HACL1Q9UJ83 578 aa13.19□□□□□ -0.3
CHD8-205ENST00000553651 TBC1D2BQ9UPU7 963 aa13.19□□□□□ -0.3
CHD8-205ENST00000553651 BCORQ6W2J9 1755 aa13.19□□□□□ -0.3
CHD8-205ENST00000553651 EPHX2P34913 555 aa13.18□□□□□ -0.3
CHD8-205ENST00000553651 MTHFSDQ2M296 383 aaKnown RBP13.18□□□□□ -0.3
CHD8-205ENST00000553651 CNBD1Q8NA66 436 aa13.18□□□□□ -0.3
CHD8-205ENST00000553651 MASTLQ96GX5 879 aa13.18□□□□□ -0.3
CHD8-205ENST00000553651 ZNF496Q96IT1 587 aaPredicted RBP13.18□□□□□ -0.3
CHD8-205ENST00000553651 PANK3Q9H999 370 aa13.18□□□□□ -0.3
CHD8-205ENST00000553651 SNED1Q8TER0 1413 aa13.18□□□□□ -0.3
CHD8-205ENST00000553651 LTBP1Q14766 1721 aa13.17□□□□□ -0.3
CHD8-205ENST00000553651 KLRG2A4D1S0 409 aaPredicted RBP13.17□□□□□ -0.3
CHD8-205ENST00000553651 FZD9O00144 591 aa13.17□□□□□ -0.3
CHD8-205ENST00000553651 STARD3NLO95772 234 aa13.17□□□□□ -0.3
CHD8-205ENST00000553651 FKBP4Q02790 459 aaKnown RBP eCLIP13.17□□□□□ -0.3
CHD8-205ENST00000553651 FMR1Q06787 632 aaKnown RBP eCLIP13.17□□□□□ -0.3
CHD8-205ENST00000553651 OLFM4Q6UX06 510 aa13.17□□□□□ -0.3
CHD8-205ENST00000553651 ZNF277Q9NRM2 450 aaPredicted RBP13.17□□□□□ -0.3
CHD8-205ENST00000553651 HEG1Q9ULI3 1381 aa13.17□□□□□ -0.3
CHD8-205ENST00000553651 RNF123Q5XPI4 1314 aa13.16□□□□□ -0.3
CHD8-205ENST00000553651 PDE4DIPQ5VU43 2346 aa13.16□□□□□ -0.3
CHD8-205ENST00000553651 COL4A5P29400 1685 aa13.16□□□□□ -0.3
CHD8-205ENST00000553651 CCDC85CA6NKD9 419 aa13.16□□□□□ -0.3
CHD8-205ENST00000553651 IL6STP40189 918 aaPredicted RBP13.16□□□□□ -0.3
CHD8-205ENST00000553651 CCDC93Q567U6 631 aa13.16□□□□□ -0.3
CHD8-205ENST00000553651 SIPA1L3O60292 1781 aaPredicted RBP13.16□□□□□ -0.3
CHD8-205ENST00000553651 PNMA8AQ86V59 439 aaPredicted RBP13.15□□□□□ -0.3
CHD8-205ENST00000553651 MORC1Q86VD1 984 aa13.15□□□□□ -0.3
CHD8-205ENST00000553651 SETDB2Q96T68 719 aa13.15□□□□□ -0.3
CHD8-205ENST00000553651 DDX21Q9NR30 783 aaKnown RBP eCLIP13.15□□□□□ -0.3
CHD8-205ENST00000553651 CLEC11AQ9Y240 323 aa13.15□□□□□ -0.3
CHD8-205ENST00000553651 A1BGP04217 495 aa13.14□□□□□ -0.31
CHD8-205ENST00000553651 HMOX1P09601 288 aa13.14□□□□□ -0.31
CHD8-205ENST00000553651 ST5P78524 1137 aa13.14□□□□□ -0.31
CHD8-205ENST00000553651 CAPNS2Q96L46 248 aa13.14□□□□□ -0.31
CHD8-205ENST00000553651 NPR1P16066 1061 aa13.13□□□□□ -0.31
CHD8-205ENST00000553651 CST9Q5W186 159 aa13.13□□□□□ -0.31
CHD8-205ENST00000553651 ZNF790Q6PG37 636 aa13.13□□□□□ -0.31
CHD8-205ENST00000553651 GPC2Q8N158 579 aa13.13□□□□□ -0.31
CHD8-205ENST00000553651 POLR3GLQ9BT43 218 aa13.13□□□□□ -0.31
CHD8-205ENST00000553651 ABT1Q9ULW3 272 aaKnown RBP13.13□□□□□ -0.31
CHD8-205ENST00000553651 TRPM7Q96QT4 1865 aa13.12□□□□□ -0.31
CHD8-205ENST00000553651 IARSP41252 1262 aaKnown RBP13.12□□□□□ -0.31
CHD8-205ENST00000553651 CYP4F22Q6NT55 531 aa13.12□□□□□ -0.31
CHD8-205ENST00000553651 TTC5Q8N0Z6 440 aa13.12□□□□□ -0.31
CHD8-205ENST00000553651 IL17REQ8NFR9 667 aa13.12□□□□□ -0.31
CHD8-205ENST00000553651 GPR101Q96P66 508 aaPredicted RBP13.12□□□□□ -0.31
CHD8-205ENST00000553651 TEX13AQ9BXU3 409 aaPredicted RBP13.12□□□□□ -0.31
CHD8-205ENST00000553651 TSKSQ9UJT2 592 aa13.12□□□□□ -0.31
CHD8-205ENST00000553651 ZNF330Q9Y3S2 320 aaPredicted RBP13.12□□□□□ -0.31
CHD8-205ENST00000553651 DZIP3Q86Y13 1208 aaKnown RBP13.11□□□□□ -0.31
CHD8-205ENST00000553651 RTKN2Q8IZC4 609 aa13.11□□□□□ -0.31
CHD8-205ENST00000553651 SYNE4Q8N205 404 aa13.11□□□□□ -0.31
CHD8-205ENST00000553651 CASP8AP2Q9UKL3 1982 aa13.11□□□□□ -0.31
CHD8-205ENST00000553651 TRAF5O00463 557 aa13.1□□□□□ -0.31
CHD8-205ENST00000553651 KCNQ3O43525 872 aa13.1□□□□□ -0.31
CHD8-205ENST00000553651 AOC2O75106 756 aa13.1□□□□□ -0.31
CHD8-205ENST00000553651 SCNN1DP51172 638 aa13.1□□□□□ -0.31
CHD8-205ENST00000553651 MCOLN1Q9GZU1 580 aa13.1□□□□□ -0.31
CHD8-205ENST00000553651 TLL2Q9Y6L7 1015 aa13.1□□□□□ -0.31
CHD8-205ENST00000553651 EPS15P42566 896 aa13.09□□□□□ -0.31
CHD8-205ENST00000553651 ECE1P42892 770 aa13.09□□□□□ -0.31
CHD8-205ENST00000553651 PIP4K2AP48426 406 aaPredicted RBP13.09□□□□□ -0.31
CHD8-205ENST00000553651 AMER1Q5JTC6 1135 aaPredicted RBP13.09□□□□□ -0.31
CHD8-205ENST00000553651 CLEC4GQ6UXB4 293 aa13.09□□□□□ -0.31
CHD8-205ENST00000553651 NBPF5PQ86XG9 351 aaPredicted RBP13.09□□□□□ -0.31
CHD8-205ENST00000553651 PSMD1Q99460 953 aa13.09□□□□□ -0.31
CHD8-205ENST00000553651 CEMIPQ8WUJ3 1361 aa13.08□□□□□ -0.31
CHD8-205ENST00000553651 NPHP1O15259 732 aa13.08□□□□□ -0.32
CHD8-205ENST00000553651 MAP2K2P36507 400 aa13.08□□□□□ -0.32
CHD8-205ENST00000553651 SLC51AQ86UW1 340 aa13.08□□□□□ -0.32
CHD8-205ENST00000553651 FMNL2Q96PY5 1086 aa13.08□□□□□ -0.32
CHD8-205ENST00000553651 USP16Q9Y5T5 823 aa13.08□□□□□ -0.32
CHD8-205ENST00000553651 PRAMEF22A3QJZ6 481 aa13.07□□□□□ -0.32
CHD8-205ENST00000553651 BEGAINQ9BUH8 593 aa13.07□□□□□ -0.32
CHD8-205ENST00000553651 COL3A1P02461 1466 aaPredicted RBP13.07□□□□□ -0.32
CHD8-205ENST00000553651 RGL2O15211 777 aa13.06□□□□□ -0.32
CHD8-205ENST00000553651 TEFQ10587 303 aa13.06□□□□□ -0.32
CHD8-205ENST00000553651 GRM1Q13255 1194 aa13.06□□□□□ -0.32
CHD8-205ENST00000553651 CRY2Q49AN0 593 aa13.06□□□□□ -0.32
CHD8-205ENST00000553651 SAPCD2Q86UD0 394 aa13.06□□□□□ -0.32
CHD8-205ENST00000553651 GNAT3A8MTJ3 354 aa13.05□□□□□ -0.32
CHD8-205ENST00000553651 NBPF26B4DH59 902 aa13.05□□□□□ -0.32
CHD8-205ENST00000553651 HSPA5P11021 654 aaKnown RBP13.05□□□□□ -0.32
CHD8-205ENST00000553651 NBPF10Q6P3W6 841 aaKnown RBP13.05□□□□□ -0.32
CHD8-205ENST00000553651 TPTE2Q6XPS3 522 aa13.05□□□□□ -0.32
CHD8-205ENST00000553651 PAXIP1Q6ZW49 1069 aaPredicted RBP13.05□□□□□ -0.32
CHD8-205ENST00000553651 USP50Q70EL3 339 aaPredicted RBP13.05□□□□□ -0.32
CHD8-205ENST00000553651 NBPF15Q8N660 670 aa13.05□□□□□ -0.32
CHD8-205ENST00000553651 GJA3Q9Y6H8 435 aa13.05□□□□□ -0.32
CHD8-205ENST00000553651 ABCC12Q96J65 1359 aa13.05□□□□□ -0.32
CHD8-205ENST00000553651 CA12O43570 354 aa13.04□□□□□ -0.32
CHD8-205ENST00000553651 DIAPH1O60610 1272 aaKnown RBP13.04□□□□□ -0.32
CHD8-205ENST00000553651 ALDH1B1P30837 517 aa13.04□□□□□ -0.32
CHD8-205ENST00000553651 EIF6P56537 245 aaKnown RBP13.04□□□□□ -0.32
CHD8-205ENST00000553651 JDP2Q8WYK2 163 aa13.04□□□□□ -0.32
CHD8-205ENST00000553651 HHIPL1Q96JK4 782 aa13.04□□□□□ -0.32
CHD8-205ENST00000553651 NIP7Q9Y221 180 aaKnown RBP eCLIP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms