RNA–Protein interactions for RNA: ENST00000553643.1

ATG2B-205, Transcript of autophagy related 2B, humanhuman

TSL 3

Gene ATG2B, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG2B-205ENST00000553643 SIX5Q8N196 739 aa8.56□□□□□ -1.04
ATG2B-205ENST00000553643 M0R2N6 131 aa8.55□□□□□ -1.04
ATG2B-205ENST00000553643 MSTNO14793 375 aa8.55□□□□□ -1.04
ATG2B-205ENST00000553643 EFSO43281 561 aa8.55□□□□□ -1.04
ATG2B-205ENST00000553643 SH3PXD2AQ5TCZ1 1133 aa8.55□□□□□ -1.04
ATG2B-205ENST00000553643 POTEAQ6S8J7 498 aa8.55□□□□□ -1.04
ATG2B-205ENST00000553643 BICDL1Q6ZP65 573 aa8.55□□□□□ -1.04
ATG2B-205ENST00000553643 SPOCK3Q9BQ16 436 aa8.55□□□□□ -1.04
ATG2B-205ENST00000553643 TSPAN10Q9H1Z9 355 aaPredicted RBP8.55□□□□□ -1.04
ATG2B-205ENST00000553643 MAFBQ9Y5Q3 323 aaPredicted RBP8.55□□□□□ -1.04
ATG2B-205ENST00000553643 SERTM1A2A2V5 107 aa8.54□□□□□ -1.04
ATG2B-205ENST00000553643 A6NJR5 290 aa8.54□□□□□ -1.04
ATG2B-205ENST00000553643 EPXP11678 715 aa8.54□□□□□ -1.04
ATG2B-205ENST00000553643 ZNF594Q96JF6 807 aaPredicted RBP8.54□□□□□ -1.04
ATG2B-205ENST00000553643 TFIP11Q9UBB9 837 aaKnown RBP8.54□□□□□ -1.04
ATG2B-205ENST00000553643 KLF15Q9UIH9 416 aa8.54□□□□□ -1.04
ATG2B-205ENST00000553643 ZNF232Q9UNY5 417 aa8.54□□□□□ -1.04
ATG2B-205ENST00000553643 GJA3Q9Y6H8 435 aa8.54□□□□□ -1.04
ATG2B-205ENST00000553643 NEURL1BA8MQ27 555 aa8.53□□□□□ -1.04
ATG2B-205ENST00000553643 HIRAP54198 1017 aaPredicted RBP8.53□□□□□ -1.04
ATG2B-205ENST00000553643 PSMA6P60900 246 aaKnown RBP8.53□□□□□ -1.04
ATG2B-205ENST00000553643 TSEN2Q8NCE0 465 aaKnown RBP8.53□□□□□ -1.04
ATG2B-205ENST00000553643 AVENQ9NQS1 362 aaPredicted RBP8.53□□□□□ -1.04
ATG2B-205ENST00000553643 STRN4Q9NRL3 753 aa8.53□□□□□ -1.04
ATG2B-205ENST00000553643 MKL2Q9ULH7 1088 aa8.53□□□□□ -1.04
ATG2B-205ENST00000553643 GPC6Q9Y625 555 aaPredicted RBP8.53□□□□□ -1.04
ATG2B-205ENST00000553643 HMGXB3Q12766 1538 aa8.53□□□□□ -1.04
ATG2B-205ENST00000553643 BAZ1AQ9NRL2 1556 aaPredicted RBP8.52□□□□□ -1.04
ATG2B-205ENST00000553643 SFI1A8K8P3 1242 aa8.52□□□□□ -1.05
ATG2B-205ENST00000553643 PROCP04070 461 aa8.52□□□□□ -1.05
ATG2B-205ENST00000553643 ADH6P28332 368 aa8.52□□□□□ -1.05
ATG2B-205ENST00000553643 LAMC2Q13753 1193 aa8.52□□□□□ -1.05
ATG2B-205ENST00000553643 LRRC69Q6ZNQ3 347 aa8.52□□□□□ -1.05
ATG2B-205ENST00000553643 RRAGCQ9HB90 399 aa8.52□□□□□ -1.05
ATG2B-205ENST00000553643 LAMC3Q9Y6N6 1575 aa8.52□□□□□ -1.05
ATG2B-205ENST00000553643 ZNF468Q5VIY5 522 aaPredicted RBP8.51□□□□□ -1.05
ATG2B-205ENST00000553643 LINC00114Q6XXX2 140 aa8.51□□□□□ -1.05
ATG2B-205ENST00000553643 FCHSD1Q86WN1 690 aa8.51□□□□□ -1.05
ATG2B-205ENST00000553643 BTBD6Q96KE9 485 aa8.51□□□□□ -1.05
ATG2B-205ENST00000553643 MARK1Q9P0L2 795 aa8.51□□□□□ -1.05
ATG2B-205ENST00000553643 KRBA1A5PL33 1030 aa8.5□□□□□ -1.05
ATG2B-205ENST00000553643 C21orf2O43822 256 aa8.5□□□□□ -1.05
ATG2B-205ENST00000553643 RASA1P20936 1047 aa8.5□□□□□ -1.05
ATG2B-205ENST00000553643 AMPD1P23109 780 aa8.5□□□□□ -1.05
ATG2B-205ENST00000553643 COL8A1P27658 744 aa8.5□□□□□ -1.05
ATG2B-205ENST00000553643 SMARCA2P51531 1590 aa8.5□□□□□ -1.05
ATG2B-205ENST00000553643 C1orf53Q5VUE5 145 aa8.5□□□□□ -1.05
ATG2B-205ENST00000553643 PPP1R12CQ9BZL4 782 aa8.5□□□□□ -1.05
ATG2B-205ENST00000553643 DGKGP49619 791 aa8.49□□□□□ -1.05
ATG2B-205ENST00000553643 CALR3Q96L12 384 aaKnown RBP8.49□□□□□ -1.05
ATG2B-205ENST00000553643 ATAD2BQ9ULI0 1458 aa8.49□□□□□ -1.05
ATG2B-205ENST00000553643 PDS5BQ9NTI5 1447 aa8.48□□□□□ -1.05
ATG2B-205ENST00000553643 PCBP4P57723 403 aaKnown RBP8.48□□□□□ -1.05
ATG2B-205ENST00000553643 RHPN1Q8TCX5 695 aa8.48□□□□□ -1.05
ATG2B-205ENST00000553643 SUV39H2Q9H5I1 410 aa8.48□□□□□ -1.05
ATG2B-205ENST00000553643 HCN4Q9Y3Q4 1203 aa8.48□□□□□ -1.05
ATG2B-205ENST00000553643 RBM19Q9Y4C8 960 aaKnown RBP8.48□□□□□ -1.05
ATG2B-205ENST00000553643 PPP1R12BO60237 982 aaPredicted RBP8.47□□□□□ -1.05
ATG2B-205ENST00000553643 ADAM23O75077 832 aa8.47□□□□□ -1.05
ATG2B-205ENST00000553643 SEC13P55735 322 aa8.47□□□□□ -1.05
ATG2B-205ENST00000553643 GRIN2CQ14957 1233 aa8.47□□□□□ -1.05
ATG2B-205ENST00000553643 CRTC2Q53ET0 693 aaPredicted RBP8.47□□□□□ -1.05
ATG2B-205ENST00000553643 KANK4Q5T7N3 995 aaPredicted RBP8.47□□□□□ -1.05
ATG2B-205ENST00000553643 CHSY3Q70JA7 882 aa8.47□□□□□ -1.05
ATG2B-205ENST00000553643 STAG2Q8N3U4 1231 aa8.47□□□□□ -1.05
ATG2B-205ENST00000553643 PHACTR1Q9C0D0 580 aa8.47□□□□□ -1.05
ATG2B-205ENST00000553643 PRR12Q9ULL5 1215 aa8.47□□□□□ -1.05
ATG2B-205ENST00000553643 CHMP3Q9Y3E7 222 aa8.47□□□□□ -1.05
ATG2B-205ENST00000553643 KIF21AQ7Z4S6 1674 aa8.46□□□□□ -1.05
ATG2B-205ENST00000553643 PTK7Q13308 1070 aa8.46□□□□□ -1.06
ATG2B-205ENST00000553643 ALYREFQ86V81 257 aaKnown RBP8.46□□□□□ -1.06
ATG2B-205ENST00000553643 HSH2DQ96JZ2 352 aa8.46□□□□□ -1.06
ATG2B-205ENST00000553643 MDFIQ99750 246 aa8.46□□□□□ -1.06
ATG2B-205ENST00000553643 NEUROD4Q9HD90 331 aa8.46□□□□□ -1.06
ATG2B-205ENST00000553643 ATAD2Q6PL18 1390 aa8.46□□□□□ -1.06
ATG2B-205ENST00000553643 GNB5O14775 395 aa8.45□□□□□ -1.06
ATG2B-205ENST00000553643 SFSWAPQ12872 951 aaKnown RBP8.45□□□□□ -1.06
ATG2B-205ENST00000553643 LARP1Q6PKG0 1096 aaKnown RBP8.45□□□□□ -1.06
ATG2B-205ENST00000553643 C2orf49Q9BVC5 232 aaPredicted RBP8.45□□□□□ -1.06
ATG2B-205ENST00000553643 RIMBP3CA6NJZ7 1639 aa8.44□□□□□ -1.06
ATG2B-205ENST00000553643 RIMBP3BA6NNM3 1639 aa8.44□□□□□ -1.06
ATG2B-205ENST00000553643 RIMBP3Q9UFD9 1639 aa8.44□□□□□ -1.06
ATG2B-205ENST00000553643 SYT9Q86SS6 491 aa8.44□□□□□ -1.06
ATG2B-205ENST00000553643 ZNF280CQ8ND82 737 aa8.44□□□□□ -1.06
ATG2B-205ENST00000553643 GAS2L2Q8NHY3 880 aa8.44□□□□□ -1.06
ATG2B-205ENST00000553643 SCG3Q8WXD2 468 aaKnown RBP8.44□□□□□ -1.06
ATG2B-205ENST00000553643 ANKIB1Q9P2G1 1089 aa8.44□□□□□ -1.06
ATG2B-205ENST00000553643 FAM196BA6NMK8 535 aa8.43□□□□□ -1.06
ATG2B-205ENST00000553643 USP17L15C9J2P7 530 aa8.43□□□□□ -1.06
ATG2B-205ENST00000553643 USP17L10C9JJH3 530 aa8.43□□□□□ -1.06
ATG2B-205ENST00000553643 USP17L13C9JLJ4 530 aa8.43□□□□□ -1.06
ATG2B-205ENST00000553643 USP17L12C9JPN9 530 aa8.43□□□□□ -1.06
ATG2B-205ENST00000553643 USP17L11C9JVI0 530 aa8.43□□□□□ -1.06
ATG2B-205ENST00000553643 USP17L21D6R901 530 aa8.43□□□□□ -1.06
ATG2B-205ENST00000553643 USP17L18D6R9N7 530 aa8.43□□□□□ -1.06
ATG2B-205ENST00000553643 USP17L22D6RA61 530 aa8.43□□□□□ -1.06
ATG2B-205ENST00000553643 USP17L17D6RBQ6 530 aa8.43□□□□□ -1.06
ATG2B-205ENST00000553643 USP17L19D6RCP7 530 aa8.43□□□□□ -1.06
ATG2B-205ENST00000553643 USP17L20D6RJB6 530 aa8.43□□□□□ -1.06
ATG2B-205ENST00000553643 PIK3R2O00459 728 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms