RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 STARD3NLO95772 234 aa18.95■□□□□ 0.62
PRPF39-204ENST00000553605 ADAMTSL1Q8N6G6 1762 aa18.94■□□□□ 0.62
PRPF39-204ENST00000553605 RNMTO43148 476 aaKnown RBP18.94■□□□□ 0.62
PRPF39-204ENST00000553605 ECE1P42892 770 aa18.94■□□□□ 0.62
PRPF39-204ENST00000553605 CCDC93Q567U6 631 aa18.94■□□□□ 0.62
PRPF39-204ENST00000553605 CNBD1Q8NA66 436 aa18.94■□□□□ 0.62
PRPF39-204ENST00000553605 C7orf43Q8WVR3 580 aa18.94■□□□□ 0.62
PRPF39-204ENST00000553605 CAPNS2Q96L46 248 aa18.94■□□□□ 0.62
PRPF39-204ENST00000553605 GPR101Q96P66 508 aaPredicted RBP18.94■□□□□ 0.62
PRPF39-204ENST00000553605 DDX21Q9NR30 783 aaKnown RBP eCLIP18.94■□□□□ 0.62
PRPF39-204ENST00000553605 TBC1D2BQ9UPU7 963 aa18.94■□□□□ 0.62
PRPF39-204ENST00000553605 ST5P78524 1137 aa18.93■□□□□ 0.62
PRPF39-204ENST00000553605 PAXIP1Q6ZW49 1069 aaPredicted RBP18.93■□□□□ 0.62
PRPF39-204ENST00000553605 SETDB2Q96T68 719 aa18.93■□□□□ 0.62
PRPF39-204ENST00000553605 ZNF277Q9NRM2 450 aaPredicted RBP18.93■□□□□ 0.62
PRPF39-204ENST00000553605 RNF123Q5XPI4 1314 aa18.93■□□□□ 0.62
PRPF39-204ENST00000553605 FKBP4Q02790 459 aaKnown RBP eCLIP18.92■□□□□ 0.62
PRPF39-204ENST00000553605 GRM1Q13255 1194 aa18.92■□□□□ 0.62
PRPF39-204ENST00000553605 CACNA1SQ13698 1873 aa18.91■□□□□ 0.62
PRPF39-204ENST00000553605 CYP4F22Q6NT55 531 aa18.91■□□□□ 0.62
PRPF39-204ENST00000553605 TSKSQ9UJT2 592 aa18.91■□□□□ 0.62
PRPF39-204ENST00000553605 ZNF330Q9Y3S2 320 aaPredicted RBP18.91■□□□□ 0.62
PRPF39-204ENST00000553605 MRC1P22897 1456 aa18.9■□□□□ 0.62
PRPF39-204ENST00000553605 MCOLN1Q9GZU1 580 aa18.9■□□□□ 0.62
PRPF39-204ENST00000553605 FZD9O00144 591 aa18.89■□□□□ 0.61
PRPF39-204ENST00000553605 GPC2Q8N158 579 aa18.89■□□□□ 0.61
PRPF39-204ENST00000553605 IL13P35225 146 aa18.88■□□□□ 0.61
PRPF39-204ENST00000553605 IL6STP40189 918 aaPredicted RBP18.88■□□□□ 0.61
PRPF39-204ENST00000553605 FMR1Q06787 632 aaKnown RBP eCLIP18.88■□□□□ 0.61
PRPF39-204ENST00000553605 RTKN2Q8IZC4 609 aa18.88■□□□□ 0.61
PRPF39-204ENST00000553605 TTC5Q8N0Z6 440 aa18.88■□□□□ 0.61
PRPF39-204ENST00000553605 POLR3GLQ9BT43 218 aa18.88■□□□□ 0.61
PRPF39-204ENST00000553605 TNRC18O15417 2968 aaPredicted RBP18.88■□□□□ 0.61
PRPF39-204ENST00000553605 THSD7BQ9C0I4 1608 aa18.88■□□□□ 0.61
PRPF39-204ENST00000553605 ARFGEF2Q9Y6D5 1785 aa18.88■□□□□ 0.61
PRPF39-204ENST00000553605 NPR1P16066 1061 aa18.87■□□□□ 0.61
PRPF39-204ENST00000553605 MAP2K2P36507 400 aa18.87■□□□□ 0.61
PRPF39-204ENST00000553605 NPM2Q86SE8 214 aaKnown RBP18.87■□□□□ 0.61
PRPF39-204ENST00000553605 TEX13AQ9BXU3 409 aaPredicted RBP18.87■□□□□ 0.61
PRPF39-204ENST00000553605 SCN7AQ01118 1682 aa18.86■□□□□ 0.61
PRPF39-204ENST00000553605 CAMTA2O94983 1202 aa18.86■□□□□ 0.61
PRPF39-204ENST00000553605 IARSP41252 1262 aaKnown RBP18.86■□□□□ 0.61
PRPF39-204ENST00000553605 OLFM4Q6UX06 510 aa18.86■□□□□ 0.61
PRPF39-204ENST00000553605 CA12O43570 354 aa18.85■□□□□ 0.61
PRPF39-204ENST00000553605 AOC2O75106 756 aa18.85■□□□□ 0.61
PRPF39-204ENST00000553605 CST9Q5W186 159 aa18.85■□□□□ 0.61
PRPF39-204ENST00000553605 MORC1Q86VD1 984 aa18.85■□□□□ 0.61
PRPF39-204ENST00000553605 SYNE4Q8N205 404 aa18.85■□□□□ 0.61
PRPF39-204ENST00000553605 TLL2Q9Y6L7 1015 aa18.85■□□□□ 0.61
PRPF39-204ENST00000553605 ZNF496Q96IT1 587 aaPredicted RBP18.84■□□□□ 0.61
PRPF39-204ENST00000553605 UBR2Q8IWV8 1755 aa18.83■□□□□ 0.61
PRPF39-204ENST00000553605 LMOD1P29536 600 aaPredicted RBP18.83■□□□□ 0.6
PRPF39-204ENST00000553605 DGKZQ13574 1117 aa18.83■□□□□ 0.6
PRPF39-204ENST00000553605 MTHFSDQ2M296 383 aaKnown RBP18.83■□□□□ 0.6
PRPF39-204ENST00000553605 NBPF5PQ86XG9 351 aaPredicted RBP18.83■□□□□ 0.6
PRPF39-204ENST00000553605 JDP2Q8WYK2 163 aa18.83■□□□□ 0.6
PRPF39-204ENST00000553605 GJA3Q9Y6H8 435 aa18.83■□□□□ 0.6
PRPF39-204ENST00000553605 HEG1Q9ULI3 1381 aa18.82■□□□□ 0.6
PRPF39-204ENST00000553605 KLRG2A4D1S0 409 aaPredicted RBP18.82■□□□□ 0.6
PRPF39-204ENST00000553605 TRAF5O00463 557 aa18.82■□□□□ 0.6
PRPF39-204ENST00000553605 A1BGP04217 495 aa18.82■□□□□ 0.6
PRPF39-204ENST00000553605 HMOX1P09601 288 aa18.81■□□□□ 0.6
PRPF39-204ENST00000553605 EIF6P56537 245 aaKnown RBP18.81■□□□□ 0.6
PRPF39-204ENST00000553605 DZIP3Q86Y13 1208 aaKnown RBP18.81■□□□□ 0.6
PRPF39-204ENST00000553605 PANK3Q9H999 370 aa18.81■□□□□ 0.6
PRPF39-204ENST00000553605 LTBP1Q14766 1721 aa18.8■□□□□ 0.6
PRPF39-204ENST00000553605 ALDH1B1P30837 517 aa18.8■□□□□ 0.6
PRPF39-204ENST00000553605 EPS15P42566 896 aa18.8■□□□□ 0.6
PRPF39-204ENST00000553605 ZNF790Q6PG37 636 aa18.8■□□□□ 0.6
PRPF39-204ENST00000553605 USP50Q70EL3 339 aaPredicted RBP18.8■□□□□ 0.6
PRPF39-204ENST00000553605 CASP8AP2Q9UKL3 1982 aa18.79■□□□□ 0.6
PRPF39-204ENST00000553605 SCNN1DP51172 638 aa18.79■□□□□ 0.6
PRPF39-204ENST00000553605 BRPF1P55201 1214 aaPredicted RBP18.78■□□□□ 0.6
PRPF39-204ENST00000553605 CLEC4GQ6UXB4 293 aa18.78■□□□□ 0.6
PRPF39-204ENST00000553605 TPTE2Q6XPS3 522 aa18.78■□□□□ 0.6
PRPF39-204ENST00000553605 SAPCD2Q86UD0 394 aa18.78■□□□□ 0.6
PRPF39-204ENST00000553605 PSMD1Q99460 953 aa18.78■□□□□ 0.6
PRPF39-204ENST00000553605 PDE4DIPQ5VU43 2346 aa18.77■□□□□ 0.6
PRPF39-204ENST00000553605 TEFQ10587 303 aa18.77■□□□□ 0.6
PRPF39-204ENST00000553605 FMNL2Q96PY5 1086 aa18.77■□□□□ 0.6
PRPF39-204ENST00000553605 TRPM7Q96QT4 1865 aa18.77■□□□□ 0.6
PRPF39-204ENST00000553605 ZNF652Q9Y2D9 606 aa18.76■□□□□ 0.59
PRPF39-204ENST00000553605 CELF2O95319 508 aaKnown RBP18.75■□□□□ 0.59
PRPF39-204ENST00000553605 HHIPL1Q96JK4 782 aa18.75■□□□□ 0.59
PRPF39-204ENST00000553605 CIAPIN1Q6FI81 312 aa18.74■□□□□ 0.59
PRPF39-204ENST00000553605 IL17REQ8NFR9 667 aa18.74■□□□□ 0.59
PRPF39-204ENST00000553605 BCORQ6W2J9 1755 aa18.73■□□□□ 0.59
PRPF39-204ENST00000553605 FAM177BA6PVY3 158 aa18.73■□□□□ 0.59
PRPF39-204ENST00000553605 PIP4K2AP48426 406 aaPredicted RBP18.73■□□□□ 0.59
PRPF39-204ENST00000553605 CC2D2BQ6DHV5 1058 aa18.73■□□□□ 0.59
PRPF39-204ENST00000553605 NIP7Q9Y221 180 aaKnown RBP eCLIP18.73■□□□□ 0.59
PRPF39-204ENST00000553605 SNED1Q8TER0 1413 aa18.73■□□□□ 0.59
PRPF39-204ENST00000553605 SOX10P56693 466 aa18.72■□□□□ 0.59
PRPF39-204ENST00000553605 PRPF38BQ5VTL8 546 aaKnown RBP18.72■□□□□ 0.59
PRPF39-204ENST00000553605 LARGE2Q8N3Y3 721 aa18.72■□□□□ 0.59
PRPF39-204ENST00000553605 ADARB2Q9NS39 739 aaKnown RBP18.72■□□□□ 0.59
PRPF39-204ENST00000553605 USP16Q9Y5T5 823 aa18.72■□□□□ 0.59
PRPF39-204ENST00000553605 COL4A5P29400 1685 aa18.72■□□□□ 0.59
PRPF39-204ENST00000553605 GTF2E1P29083 439 aaPredicted RBP18.71■□□□□ 0.59
PRPF39-204ENST00000553605 GNAT3A8MTJ3 354 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms