RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 C4AP0C0L4 1744 aa24.65■■□□□ 1.54
PSEN1-207ENST00000553599 FKBP5Q13451 457 aaPredicted RBP24.65■■□□□ 1.54
PSEN1-207ENST00000553599 TTLL7Q6ZT98 887 aa24.65■■□□□ 1.54
PSEN1-207ENST00000553599 USP42Q9H9J4 1324 aaKnown RBP24.64■■□□□ 1.54
PSEN1-207ENST00000553599 CLEC4GQ6UXB4 293 aa24.64■■□□□ 1.54
PSEN1-207ENST00000553599 KSR2Q6VAB6 950 aa24.64■■□□□ 1.54
PSEN1-207ENST00000553599 COL23A1Q86Y22 540 aaPredicted RBP24.64■■□□□ 1.54
PSEN1-207ENST00000553599 ARXQ96QS3 562 aa24.64■■□□□ 1.54
PSEN1-207ENST00000553599 TBC1D2BQ9UPU7 963 aa24.64■■□□□ 1.54
PSEN1-207ENST00000553599 ZNF652Q9Y2D9 606 aa24.64■■□□□ 1.54
PSEN1-207ENST00000553599 CAMTA2O94983 1202 aa24.63■■□□□ 1.53
PSEN1-207ENST00000553599 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.63■■□□□ 1.53
PSEN1-207ENST00000553599 API5Q9BZZ5 524 aaKnown RBP24.63■■□□□ 1.53
PSEN1-207ENST00000553599 NOB1Q9ULX3 412 aaKnown RBP24.63■■□□□ 1.53
PSEN1-207ENST00000553599 SCN7AQ01118 1682 aa24.62■■□□□ 1.53
PSEN1-207ENST00000553599 SLC16A10Q8TF71 515 aa24.62■■□□□ 1.53
PSEN1-207ENST00000553599 BCORQ6W2J9 1755 aa24.62■■□□□ 1.53
PSEN1-207ENST00000553599 HSP90AB3PQ58FF7 597 aa24.61■■□□□ 1.53
PSEN1-207ENST00000553599 GIGYF2Q6Y7W6 1299 aaKnown RBP24.61■■□□□ 1.53
PSEN1-207ENST00000553599 RIC3Q7Z5B4 369 aa24.61■■□□□ 1.53
PSEN1-207ENST00000553599 PI4KAP2A4QPH2 592 aa24.6■■□□□ 1.53
PSEN1-207ENST00000553599 MSH5O43196 834 aa24.6■■□□□ 1.53
PSEN1-207ENST00000553599 ZKSCAN2Q63HK3 967 aa24.6■■□□□ 1.53
PSEN1-207ENST00000553599 SMIM5Q71RC9 77 aa24.6■■□□□ 1.53
PSEN1-207ENST00000553599 PI4KAP1Q8N8J0 262 aa24.6■■□□□ 1.53
PSEN1-207ENST00000553599 ZBTB3Q9H5J0 574 aa24.6■■□□□ 1.53
PSEN1-207ENST00000553599 ADCY9O60503 1353 aa24.59■■□□□ 1.53
PSEN1-207ENST00000553599 R3HDM1Q15032 1099 aaKnown RBP24.59■■□□□ 1.53
PSEN1-207ENST00000553599 USPL1Q5W0Q7 1092 aa24.59■■□□□ 1.53
PSEN1-207ENST00000553599 ATF7IPQ6VMQ6 1270 aa24.59■■□□□ 1.53
PSEN1-207ENST00000553599 FRAT1Q92837 279 aaPredicted RBP24.59■■□□□ 1.53
PSEN1-207ENST00000553599 MS4A1P11836 297 aa24.58■■□□□ 1.53
PSEN1-207ENST00000553599 NLGN1Q8N2Q7 840 aa24.58■■□□□ 1.53
PSEN1-207ENST00000553599 DNAAF4Q8WXU2 420 aa24.58■■□□□ 1.53
PSEN1-207ENST00000553599 SRP68Q9UHB9 627 aaKnown RBP24.58■■□□□ 1.53
PSEN1-207ENST00000553599 MAP3K2Q9Y2U5 619 aa24.58■■□□□ 1.53
PSEN1-207ENST00000553599 GYS1P13807 737 aa24.57■■□□□ 1.52
PSEN1-207ENST00000553599 NEXNQ0ZGT2 675 aa24.57■■□□□ 1.52
PSEN1-207ENST00000553599 METTL22Q9BUU2 404 aaPredicted RBP24.57■■□□□ 1.52
PSEN1-207ENST00000553599 ATP10DQ9P241 1426 aa24.57■■□□□ 1.52
PSEN1-207ENST00000553599 PXDNLA1KZ92 1463 aa24.57■■□□□ 1.52
PSEN1-207ENST00000553599 ARFGEF2Q9Y6D5 1785 aa24.57■■□□□ 1.52
PSEN1-207ENST00000553599 TCIRG1Q13488 830 aa24.56■■□□□ 1.52
PSEN1-207ENST00000553599 BCL2L12Q9HB09 334 aa24.56■■□□□ 1.52
PSEN1-207ENST00000553599 NUP98P52948 1817 aa24.56■■□□□ 1.52
PSEN1-207ENST00000553599 CASZ1Q86V15 1759 aa24.55■■□□□ 1.52
PSEN1-207ENST00000553599 HLFQ16534 295 aa24.55■■□□□ 1.52
PSEN1-207ENST00000553599 TRIM27P14373 513 aa24.54■■□□□ 1.52
PSEN1-207ENST00000553599 TRIM28Q13263 835 aaKnown RBP24.54■■□□□ 1.52
PSEN1-207ENST00000553599 IBTKQ9P2D0 1353 aaPredicted RBP24.53■■□□□ 1.52
PSEN1-207ENST00000553599 F6X3S4 739 aa24.52■■□□□ 1.52
PSEN1-207ENST00000553599 RRP1P56182 461 aaKnown RBP24.52■■□□□ 1.52
PSEN1-207ENST00000553599 FKBP8Q14318 412 aa24.52■■□□□ 1.52
PSEN1-207ENST00000553599 PARP10Q53GL7 1025 aa24.52■■□□□ 1.52
PSEN1-207ENST00000553599 ZNF34Q8IZ26 560 aa24.52■■□□□ 1.52
PSEN1-207ENST00000553599 LINS1Q8NG48 757 aa24.52■■□□□ 1.52
PSEN1-207ENST00000553599 ABCC4O15439 1325 aa24.52■■□□□ 1.52
PSEN1-207ENST00000553599 RNF123Q5XPI4 1314 aa24.52■■□□□ 1.52
PSEN1-207ENST00000553599 ANKRD36CQ5JPF3 1778 aa24.52■■□□□ 1.52
PSEN1-207ENST00000553599 CCT4P50991 539 aaKnown RBP24.51■■□□□ 1.51
PSEN1-207ENST00000553599 DZIP1LQ8IYY4 767 aaKnown RBP24.51■■□□□ 1.51
PSEN1-207ENST00000553599 MYD88Q99836 296 aa24.51■■□□□ 1.51
PSEN1-207ENST00000553599 ISCA1Q9BUE6 129 aa24.51■■□□□ 1.51
PSEN1-207ENST00000553599 PSDA5PKW4 1024 aaPredicted RBP24.5■■□□□ 1.51
PSEN1-207ENST00000553599 PDE3AQ14432 1141 aa24.5■■□□□ 1.51
PSEN1-207ENST00000553599 BEND3Q5T5X7 828 aa24.5■■□□□ 1.51
PSEN1-207ENST00000553599 SLC4A10Q6U841 1118 aa24.5■■□□□ 1.51
PSEN1-207ENST00000553599 FTSJ3Q8IY81 847 aaKnown RBP24.5■■□□□ 1.51
PSEN1-207ENST00000553599 SETDB2Q96T68 719 aa24.5■■□□□ 1.51
PSEN1-207ENST00000553599 MTFR1LQ9H019 292 aa24.5■■□□□ 1.51
PSEN1-207ENST00000553599 NIP7Q9Y221 180 aaKnown RBP eCLIP24.5■■□□□ 1.51
PSEN1-207ENST00000553599 ALDH1L1O75891 902 aa24.49■■□□□ 1.51
PSEN1-207ENST00000553599 TM4SF1P30408 202 aa24.49■■□□□ 1.51
PSEN1-207ENST00000553599 TBC1D9BQ66K14 1250 aa24.49■■□□□ 1.51
PSEN1-207ENST00000553599 CCDC191Q8NCU4 936 aa24.49■■□□□ 1.51
PSEN1-207ENST00000553599 SRCIN1Q9C0H9 1055 aa24.49■■□□□ 1.51
PSEN1-207ENST00000553599 PDGFDQ9GZP0 370 aaPredicted RBP24.49■■□□□ 1.51
PSEN1-207ENST00000553599 INTS3Q68E01 1043 aaKnown RBP24.48■■□□□ 1.51
PSEN1-207ENST00000553599 N4BP2Q86UW6 1770 aaPredicted RBP24.48■■□□□ 1.51
PSEN1-207ENST00000553599 CARMIL3Q8ND23 1372 aa24.48■■□□□ 1.51
PSEN1-207ENST00000553599 IGKV5-2P06315 115 aa24.47■■□□□ 1.51
PSEN1-207ENST00000553599 NFIXQ14938 502 aa24.47■■□□□ 1.51
PSEN1-207ENST00000553599 SUPT16HQ9Y5B9 1047 aaKnown RBP24.47■■□□□ 1.51
PSEN1-207ENST00000553599 COL24A1Q17RW2 1714 aa24.47■■□□□ 1.51
PSEN1-207ENST00000553599 NEURL1BA8MQ27 555 aa24.46■■□□□ 1.51
PSEN1-207ENST00000553599 PLIN1O60240 522 aa24.46■■□□□ 1.51
PSEN1-207ENST00000553599 PPP1R42Q7Z4L9 355 aa24.46■■□□□ 1.51
PSEN1-207ENST00000553599 NLRP10Q86W26 655 aa24.46■■□□□ 1.51
PSEN1-207ENST00000553599 CWC25Q9NXE8 425 aaPredicted RBP24.46■■□□□ 1.51
PSEN1-207ENST00000553599 ATP5J2-PTCD1G3V325 749 aa24.45■■□□□ 1.5
PSEN1-207ENST00000553599 GPTP24298 496 aa24.45■■□□□ 1.5
PSEN1-207ENST00000553599 CLUAP1Q96AJ1 413 aa24.45■■□□□ 1.5
PSEN1-207ENST00000553599 NYXQ9GZU5 481 aa24.45■■□□□ 1.5
PSEN1-207ENST00000553599 UBN2Q6ZU65 1347 aa24.44■■□□□ 1.5
PSEN1-207ENST00000553599 BICDL1Q6ZP65 573 aa24.44■■□□□ 1.5
PSEN1-207ENST00000553599 ZBTB7AO95365 584 aa24.43■■□□□ 1.5
PSEN1-207ENST00000553599 MMP10P09238 476 aa24.43■■□□□ 1.5
PSEN1-207ENST00000553599 GCKRQ14397 625 aa24.43■■□□□ 1.5
PSEN1-207ENST00000553599 CWF19L2Q2TBE0 894 aaKnown RBP24.43■■□□□ 1.5
PSEN1-207ENST00000553599 MSL1Q68DK7 614 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 291.2 ms