RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 LMNB1P20700 586 aa16.52■□□□□ 0.24
SIX1-202ENST00000553535 RBM46Q8TBY0 533 aaKnown RBP16.51■□□□□ 0.23
SIX1-202ENST00000553535 DLG5Q8TDM6 1919 aa16.51■□□□□ 0.23
SIX1-202ENST00000553535 BCORQ6W2J9 1755 aa16.51■□□□□ 0.23
SIX1-202ENST00000553535 ZC3H4Q9UPT8 1303 aaKnown RBP16.51■□□□□ 0.23
SIX1-202ENST00000553535 NBPF26B4DH59 902 aa16.51■□□□□ 0.23
SIX1-202ENST00000553535 NFKBIEO00221 500 aa16.51■□□□□ 0.23
SIX1-202ENST00000553535 NBPF10Q6P3W6 841 aaKnown RBP16.51■□□□□ 0.23
SIX1-202ENST00000553535 CLEC4GQ6UXB4 293 aa16.51■□□□□ 0.23
SIX1-202ENST00000553535 NBPF15Q8N660 670 aa16.51■□□□□ 0.23
SIX1-202ENST00000553535 ZNF622Q969S3 477 aaKnown RBP eCLIP16.51■□□□□ 0.23
SIX1-202ENST00000553535 PLEKHF1Q96S99 279 aa16.51■□□□□ 0.23
SIX1-202ENST00000553535 RRAGCQ9HB90 399 aa16.51■□□□□ 0.23
SIX1-202ENST00000553535 APLP1P51693 650 aa16.5■□□□□ 0.23
SIX1-202ENST00000553535 CNBD1Q8NA66 436 aa16.5■□□□□ 0.23
SIX1-202ENST00000553535 MIS18AQ9NYP9 233 aa16.5■□□□□ 0.23
SIX1-202ENST00000553535 COL11A2P13942 1736 aaPredicted RBP16.48■□□□□ 0.23
SIX1-202ENST00000553535 RGL2O15211 777 aa16.48■□□□□ 0.23
SIX1-202ENST00000553535 C16orf71Q8IYS4 520 aaPredicted RBP16.48■□□□□ 0.23
SIX1-202ENST00000553535 FER1L6Q2WGJ9 1857 aa16.48■□□□□ 0.23
SIX1-202ENST00000553535 GLTPD2A6NH11 291 aa16.47■□□□□ 0.23
SIX1-202ENST00000553535 C21orf2O43822 256 aa16.47■□□□□ 0.23
SIX1-202ENST00000553535 NEFMP07197 916 aa16.47■□□□□ 0.23
SIX1-202ENST00000553535 SRGNP10124 158 aa16.47■□□□□ 0.23
SIX1-202ENST00000553535 DNAJC5GQ8N7S2 189 aa16.47■□□□□ 0.23
SIX1-202ENST00000553535 TNRC6CQ9HCJ0 1690 aaKnown RBP16.47■□□□□ 0.23
SIX1-202ENST00000553535 SLX4Q8IY92 1834 aa16.47■□□□□ 0.23
SIX1-202ENST00000553535 ST5P78524 1137 aa16.47■□□□□ 0.23
SIX1-202ENST00000553535 FSTL1Q12841 308 aa16.47■□□□□ 0.23
SIX1-202ENST00000553535 NFE2L2Q16236 605 aa16.47■□□□□ 0.23
SIX1-202ENST00000553535 STYK1Q6J9G0 422 aa16.47■□□□□ 0.23
SIX1-202ENST00000553535 PNISRQ8TF01 805 aaKnown RBP16.47■□□□□ 0.23
SIX1-202ENST00000553535 ZNF652Q9Y2D9 606 aa16.47■□□□□ 0.23
SIX1-202ENST00000553535 NPHP1O15259 732 aa16.46■□□□□ 0.23
SIX1-202ENST00000553535 NBPF5PQ86XG9 351 aaPredicted RBP16.46■□□□□ 0.23
SIX1-202ENST00000553535 CNKSR1Q969H4 720 aa16.46■□□□□ 0.23
SIX1-202ENST00000553535 DICER1Q9UPY3 1922 aaKnown RBP16.46■□□□□ 0.22
SIX1-202ENST00000553535 MASTLQ96GX5 879 aa16.45■□□□□ 0.22
SIX1-202ENST00000553535 KDM3BQ7LBC6 1761 aa16.44■□□□□ 0.22
SIX1-202ENST00000553535 KLRG2A4D1S0 409 aaPredicted RBP16.44■□□□□ 0.22
SIX1-202ENST00000553535 EIF4A1P60842 406 aaKnown RBP16.44■□□□□ 0.22
SIX1-202ENST00000553535 HLFQ16534 295 aa16.44■□□□□ 0.22
SIX1-202ENST00000553535 PNNQ9H307 717 aaKnown RBP16.44■□□□□ 0.22
SIX1-202ENST00000553535 NIP7Q9Y221 180 aaKnown RBP eCLIP16.44■□□□□ 0.22
SIX1-202ENST00000553535 LTBP3Q9NS15 1303 aa16.44■□□□□ 0.22
SIX1-202ENST00000553535 VEGFAP15692 232 aaPredicted RBP16.43■□□□□ 0.22
SIX1-202ENST00000553535 PRPF40BQ6NWY9 871 aaKnown RBP16.43■□□□□ 0.22
SIX1-202ENST00000553535 TPTE2Q6XPS3 522 aa16.43■□□□□ 0.22
SIX1-202ENST00000553535 THUMPD2Q9BTF0 503 aaKnown RBP16.43■□□□□ 0.22
SIX1-202ENST00000553535 CACNA1SQ13698 1873 aa16.43■□□□□ 0.22
SIX1-202ENST00000553535 TIAM2Q8IVF5 1701 aa16.43■□□□□ 0.22
SIX1-202ENST00000553535 LAMB4A4D0S4 1761 aa16.43■□□□□ 0.22
SIX1-202ENST00000553535 ARFGEF2Q9Y6D5 1785 aa16.43■□□□□ 0.22
SIX1-202ENST00000553535 C7orf43Q8WVR3 580 aa16.43■□□□□ 0.22
SIX1-202ENST00000553535 POTECB2RU33 542 aa16.42■□□□□ 0.22
SIX1-202ENST00000553535 WDR90Q96KV7 1748 aa16.41■□□□□ 0.22
SIX1-202ENST00000553535 NPR1P16066 1061 aa16.41■□□□□ 0.22
SIX1-202ENST00000553535 RALBP1Q15311 655 aa16.41■□□□□ 0.22
SIX1-202ENST00000553535 ERFEQ4G0M1 354 aa16.41■□□□□ 0.22
SIX1-202ENST00000553535 SOGA3Q5TF21 947 aa16.41■□□□□ 0.22
SIX1-202ENST00000553535 DPY19L2Q6NUT2 758 aa16.41■□□□□ 0.22
SIX1-202ENST00000553535 SMC1BQ8NDV3 1235 aa16.41■□□□□ 0.22
SIX1-202ENST00000553535 TAOK3Q9H2K8 898 aa16.41■□□□□ 0.22
SIX1-202ENST00000553535 NUP98P52948 1817 aa16.41■□□□□ 0.22
SIX1-202ENST00000553535 MAPK8IP3Q9UPT6 1336 aa16.41■□□□□ 0.22
SIX1-202ENST00000553535 ERVV-1B6SEH8 477 aa16.4■□□□□ 0.22
SIX1-202ENST00000553535 NGEFQ8N5V2 710 aa16.4■□□□□ 0.22
SIX1-202ENST00000553535 FAM177BA6PVY3 158 aa16.39■□□□□ 0.21
SIX1-202ENST00000553535 HTRA3P83110 453 aa16.39■□□□□ 0.21
SIX1-202ENST00000553535 RRP7AQ9Y3A4 280 aaKnown RBP16.39■□□□□ 0.21
SIX1-202ENST00000553535 TTLL7Q6ZT98 887 aa16.38■□□□□ 0.21
SIX1-202ENST00000553535 MAP3K15Q6ZN16 1313 aa16.38■□□□□ 0.21
SIX1-202ENST00000553535 MYL6BP14649 208 aa16.37■□□□□ 0.21
SIX1-202ENST00000553535 RIPK4P57078 832 aa16.37■□□□□ 0.21
SIX1-202ENST00000553535 IFFO2Q5TF58 517 aa16.37■□□□□ 0.21
SIX1-202ENST00000553535 GTF2E1P29083 439 aaPredicted RBP16.36■□□□□ 0.21
SIX1-202ENST00000553535 DDX10Q13206 875 aaKnown RBP16.36■□□□□ 0.21
SIX1-202ENST00000553535 CCDC93Q567U6 631 aa16.36■□□□□ 0.21
SIX1-202ENST00000553535 KLRG1Q96E93 195 aa16.36■□□□□ 0.21
SIX1-202ENST00000553535 ALDH1B1P30837 517 aa16.35■□□□□ 0.21
SIX1-202ENST00000553535 TMPOP42166 694 aaKnown RBP16.35■□□□□ 0.21
SIX1-202ENST00000553535 KIF6Q6ZMV9 814 aa16.35■□□□□ 0.21
SIX1-202ENST00000553535 NYXQ9GZU5 481 aa16.35■□□□□ 0.21
SIX1-202ENST00000553535 BABAM1Q9NWV8 329 aa16.35■□□□□ 0.21
SIX1-202ENST00000553535 TSPYL4Q9UJ04 414 aa16.35■□□□□ 0.21
SIX1-202ENST00000553535 ERBB4Q15303 1308 aa16.35■□□□□ 0.21
SIX1-202ENST00000553535 PCNTO95613 3336 aa16.35■□□□□ 0.21
SIX1-202ENST00000553535 DDNO94850 711 aaPredicted RBP16.34■□□□□ 0.21
SIX1-202ENST00000553535 FKBP4Q02790 459 aaKnown RBP eCLIP16.34■□□□□ 0.21
SIX1-202ENST00000553535 CRY2Q49AN0 593 aa16.34■□□□□ 0.21
SIX1-202ENST00000553535 OLFM4Q6UX06 510 aa16.34■□□□□ 0.21
SIX1-202ENST00000553535 LRP10Q7Z4F1 713 aa16.34■□□□□ 0.21
SIX1-202ENST00000553535 NUTM1Q86Y26 1132 aa16.34■□□□□ 0.21
SIX1-202ENST00000553535 ZNF34Q8IZ26 560 aa16.34■□□□□ 0.21
SIX1-202ENST00000553535 SP7Q8TDD2 431 aaPredicted RBP16.34■□□□□ 0.21
SIX1-202ENST00000553535 PDIA6Q15084 440 aa16.34■□□□□ 0.21
SIX1-202ENST00000553535 RTKN2Q8IZC4 609 aa16.34■□□□□ 0.21
SIX1-202ENST00000553535 JMYQ8N9B5 988 aa16.34■□□□□ 0.21
SIX1-202ENST00000553535 ZBTB3Q9H5J0 574 aa16.34■□□□□ 0.21
SIX1-202ENST00000553535 UBN2Q6ZU65 1347 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms