RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 BCAMP50895 628 aa10.39□□□□□ -0.75
ATXN3-219ENST00000553488 KCNQ4P56696 695 aa10.39□□□□□ -0.75
ATXN3-219ENST00000553488 ADGRG1Q9Y653 693 aa10.39□□□□□ -0.75
ATXN3-219ENST00000553488 ADCY9O60503 1353 aa10.39□□□□□ -0.75
ATXN3-219ENST00000553488 FECHP22830 423 aa10.38□□□□□ -0.75
ATXN3-219ENST00000553488 PTPN5P54829 565 aa10.38□□□□□ -0.75
ATXN3-219ENST00000553488 IFFO2Q5TF58 517 aa10.38□□□□□ -0.75
ATXN3-219ENST00000553488 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.38□□□□□ -0.75
ATXN3-219ENST00000553488 IP6K1Q92551 441 aa10.38□□□□□ -0.75
ATXN3-219ENST00000553488 SIN3AQ96ST3 1273 aa10.38□□□□□ -0.75
ATXN3-219ENST00000553488 ATP10DQ9P241 1426 aa10.38□□□□□ -0.75
ATXN3-219ENST00000553488 PKD1L3Q7Z443 1732 aa10.38□□□□□ -0.75
ATXN3-219ENST00000553488 C4BP0C0L5 1744 aa10.37□□□□□ -0.75
ATXN3-219ENST00000553488 SLC12A5Q9H2X9 1139 aa10.37□□□□□ -0.75
ATXN3-219ENST00000553488 TFCP2L1Q9NZI6 479 aa10.37□□□□□ -0.75
ATXN3-219ENST00000553488 MAP2P11137 1827 aaKnown RBP10.37□□□□□ -0.75
ATXN3-219ENST00000553488 KIF20BQ96Q89 1820 aa10.36□□□□□ -0.75
ATXN3-219ENST00000553488 GNPATO15228 680 aa10.36□□□□□ -0.75
ATXN3-219ENST00000553488 DDX54Q8TDD1 881 aaKnown RBP10.36□□□□□ -0.75
ATXN3-219ENST00000553488 RTL1A6NKG5 1358 aa10.36□□□□□ -0.75
ATXN3-219ENST00000553488 CICQ96RK0 1608 aaPredicted RBP10.36□□□□□ -0.75
ATXN3-219ENST00000553488 KIAA1551Q9HCM1 1747 aa10.36□□□□□ -0.75
ATXN3-219ENST00000553488 MAP3K19Q56UN5 1328 aa10.35□□□□□ -0.75
ATXN3-219ENST00000553488 HOXC9P31274 260 aa10.35□□□□□ -0.75
ATXN3-219ENST00000553488 SAMD7Q7Z3H4 446 aa10.35□□□□□ -0.75
ATXN3-219ENST00000553488 HDGFL2Q7Z4V5 671 aaPredicted RBP10.35□□□□□ -0.75
ATXN3-219ENST00000553488 COL23A1Q86Y22 540 aaPredicted RBP10.35□□□□□ -0.75
ATXN3-219ENST00000553488 GPIHBP1Q8IV16 184 aa10.35□□□□□ -0.75
ATXN3-219ENST00000553488 LRCH3Q96II8 777 aa10.35□□□□□ -0.75
ATXN3-219ENST00000553488 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.35□□□□□ -0.75
ATXN3-219ENST00000553488 ANKRD26Q9UPS8 1709 aa10.34□□□□□ -0.75
ATXN3-219ENST00000553488 TMC1Q8TDI8 760 aa10.34□□□□□ -0.75
ATXN3-219ENST00000553488 SYTL4Q96C24 671 aaPredicted RBP10.34□□□□□ -0.75
ATXN3-219ENST00000553488 LTV1Q96GA3 475 aaPredicted RBP10.34□□□□□ -0.75
ATXN3-219ENST00000553488 CCNL1Q9UK58 526 aaPredicted RBP10.34□□□□□ -0.75
ATXN3-219ENST00000553488 KIF13BQ9NQT8 1826 aa10.34□□□□□ -0.75
ATXN3-219ENST00000553488 GRIN3BO60391 1043 aa10.33□□□□□ -0.76
ATXN3-219ENST00000553488 FAM161AQ3B820 660 aa10.33□□□□□ -0.76
ATXN3-219ENST00000553488 PXYLP1Q8TE99 480 aa10.33□□□□□ -0.76
ATXN3-219ENST00000553488 PUS7Q96PZ0 661 aaKnown RBP10.33□□□□□ -0.76
ATXN3-219ENST00000553488 WBP1LQ9NX94 342 aa10.33□□□□□ -0.76
ATXN3-219ENST00000553488 TERF2IPQ9NYB0 399 aa10.33□□□□□ -0.76
ATXN3-219ENST00000553488 USP47Q96K76 1375 aa10.33□□□□□ -0.76
ATXN3-219ENST00000553488 MSL1Q68DK7 614 aa10.32□□□□□ -0.76
ATXN3-219ENST00000553488 NYAP1Q6ZVC0 841 aa10.32□□□□□ -0.76
ATXN3-219ENST00000553488 ZCRB1Q8TBF4 217 aaKnown RBP10.32□□□□□ -0.76
ATXN3-219ENST00000553488 CARD11Q9BXL7 1154 aa10.32□□□□□ -0.76
ATXN3-219ENST00000553488 TSR3Q9UJK0 312 aaKnown RBP10.32□□□□□ -0.76
ATXN3-219ENST00000553488 PCNTO95613 3336 aa10.32□□□□□ -0.76
ATXN3-219ENST00000553488 BRCA1P38398 1863 aaKnown RBP10.32□□□□□ -0.76
ATXN3-219ENST00000553488 FBLN1P23142 703 aa10.31□□□□□ -0.76
ATXN3-219ENST00000553488 RBM46Q8TBY0 533 aaKnown RBP10.31□□□□□ -0.76
ATXN3-219ENST00000553488 TESK2Q96S53 571 aa10.31□□□□□ -0.76
ATXN3-219ENST00000553488 NCAPD2Q15021 1401 aa10.31□□□□□ -0.76
ATXN3-219ENST00000553488 CGNL1Q0VF96 1302 aa10.31□□□□□ -0.76
ATXN3-219ENST00000553488 PALLDQ8WX93 1383 aa10.3□□□□□ -0.76
ATXN3-219ENST00000553488 NEUROD1Q13562 356 aa10.3□□□□□ -0.76
ATXN3-219ENST00000553488 SWT1Q5T5J6 900 aaKnown RBP10.3□□□□□ -0.76
ATXN3-219ENST00000553488 NBPF6Q5VWK0 638 aa10.3□□□□□ -0.76
ATXN3-219ENST00000553488 AMIGO3Q86WK7 504 aa10.3□□□□□ -0.76
ATXN3-219ENST00000553488 COG3Q96JB2 828 aa10.3□□□□□ -0.76
ATXN3-219ENST00000553488 NBPF4Q96M43 638 aa10.3□□□□□ -0.76
ATXN3-219ENST00000553488 TMEM134Q9H6X4 195 aa10.3□□□□□ -0.76
ATXN3-219ENST00000553488 HPS5Q9UPZ3 1129 aa10.3□□□□□ -0.76
ATXN3-219ENST00000553488 CD2APQ9Y5K6 639 aa10.3□□□□□ -0.76
ATXN3-219ENST00000553488 TULP1O00294 542 aaPredicted RBP10.29□□□□□ -0.76
ATXN3-219ENST00000553488 OATP04181 439 aa10.29□□□□□ -0.76
ATXN3-219ENST00000553488 DNAJB2P25686 324 aa10.29□□□□□ -0.76
ATXN3-219ENST00000553488 AMPHP49418 695 aa10.29□□□□□ -0.76
ATXN3-219ENST00000553488 METTL3Q86U44 580 aaKnown RBP10.29□□□□□ -0.76
ATXN3-219ENST00000553488 USHBP1Q8N6Y0 703 aa10.29□□□□□ -0.76
ATXN3-219ENST00000553488 SMG6Q86US8 1419 aaKnown RBP10.29□□□□□ -0.76
ATXN3-219ENST00000553488 N4BP2Q86UW6 1770 aaPredicted RBP10.29□□□□□ -0.76
ATXN3-219ENST00000553488 RCCD1A6NED2 376 aa10.28□□□□□ -0.76
ATXN3-219ENST00000553488 HSPA6P17066 643 aa10.28□□□□□ -0.76
ATXN3-219ENST00000553488 RRS1Q15050 365 aaKnown RBP10.28□□□□□ -0.76
ATXN3-219ENST00000553488 GPBP1L1Q9HC44 474 aaPredicted RBP10.28□□□□□ -0.76
ATXN3-219ENST00000553488 PCDH11XQ9BZA7 1347 aa10.28□□□□□ -0.76
ATXN3-219ENST00000553488 PCDH11YQ9BZA8 1340 aa10.28□□□□□ -0.76
ATXN3-219ENST00000553488 INSRP06213 1382 aa10.27□□□□□ -0.76
ATXN3-219ENST00000553488 COL5A3P25940 1745 aaPredicted RBP10.27□□□□□ -0.76
ATXN3-219ENST00000553488 FLAD1Q8NFF5 587 aa10.27□□□□□ -0.77
ATXN3-219ENST00000553488 ZNF831Q5JPB2 1677 aa10.27□□□□□ -0.77
ATXN3-219ENST00000553488 IGSF1Q8N6C5 1336 aa10.27□□□□□ -0.77
ATXN3-219ENST00000553488 FLT4P35916 1363 aa10.26□□□□□ -0.77
ATXN3-219ENST00000553488 NSD3Q9BZ95 1437 aa10.26□□□□□ -0.77
ATXN3-219ENST00000553488 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.26□□□□□ -0.77
ATXN3-219ENST00000553488 CYP27B1O15528 508 aa10.26□□□□□ -0.77
ATXN3-219ENST00000553488 ITGBL1O95965 494 aaPredicted RBP10.26□□□□□ -0.77
ATXN3-219ENST00000553488 RAPGEF4Q8WZA2 1011 aa10.26□□□□□ -0.77
ATXN3-219ENST00000553488 PLA2G2EQ9NZK7 142 aa10.26□□□□□ -0.77
ATXN3-219ENST00000553488 C4AP0C0L4 1744 aa10.26□□□□□ -0.77
ATXN3-219ENST00000553488 ARFGEF1Q9Y6D6 1849 aa10.26□□□□□ -0.77
ATXN3-219ENST00000553488 KIF24Q5T7B8 1368 aa10.26□□□□□ -0.77
ATXN3-219ENST00000553488 PXDNLA1KZ92 1463 aa10.25□□□□□ -0.77
ATXN3-219ENST00000553488 WDR90Q96KV7 1748 aa10.25□□□□□ -0.77
ATXN3-219ENST00000553488 FYB1O15117 783 aa10.25□□□□□ -0.77
ATXN3-219ENST00000553488 TATP17735 454 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-219ENST00000553488 PPP4CP60510 307 aa10.25□□□□□ -0.77
ATXN3-219ENST00000553488 PHOX2BQ99453 314 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms