RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 USPL1Q5W0Q7 1092 aa19.07■□□□□ 0.64
MTHFD1-204ENST00000553405 SGIP1Q9BQI5 828 aa19.07■□□□□ 0.64
MTHFD1-204ENST00000553405 ZNF330Q9Y3S2 320 aaPredicted RBP19.07■□□□□ 0.64
MTHFD1-204ENST00000553405 NUP98P52948 1817 aa19.07■□□□□ 0.64
MTHFD1-204ENST00000553405 ARFGEF2Q9Y6D5 1785 aa19.06■□□□□ 0.64
MTHFD1-204ENST00000553405 ERVV-1B6SEH8 477 aa19.06■□□□□ 0.64
MTHFD1-204ENST00000553405 HLFQ16534 295 aa19.06■□□□□ 0.64
MTHFD1-204ENST00000553405 STK31Q9BXU1 1019 aa19.06■□□□□ 0.64
MTHFD1-204ENST00000553405 ADCY9O60503 1353 aa19.06■□□□□ 0.64
MTHFD1-204ENST00000553405 ZBTB7AO95365 584 aa19.04■□□□□ 0.64
MTHFD1-204ENST00000553405 TM4SF1P30408 202 aa19.04■□□□□ 0.64
MTHFD1-204ENST00000553405 FLIIQ13045 1269 aa19.04■□□□□ 0.64
MTHFD1-204ENST00000553405 CLEC4GQ6UXB4 293 aa19.04■□□□□ 0.64
MTHFD1-204ENST00000553405 BCL2L13Q9BXK5 485 aa19.04■□□□□ 0.64
MTHFD1-204ENST00000553405 MTFR1LQ9H019 292 aa19.04■□□□□ 0.64
MTHFD1-204ENST00000553405 ATP10DQ9P241 1426 aa19.04■□□□□ 0.64
MTHFD1-204ENST00000553405 ANKRD36CQ5JPF3 1778 aa19.04■□□□□ 0.64
MTHFD1-204ENST00000553405 ZPR1O75312 459 aa19.03■□□□□ 0.64
MTHFD1-204ENST00000553405 PTGER2P43116 358 aa19.03■□□□□ 0.64
MTHFD1-204ENST00000553405 AIMP1Q12904 312 aaKnown RBP19.03■□□□□ 0.64
MTHFD1-204ENST00000553405 PLBD2Q8NHP8 589 aa19.03■□□□□ 0.64
MTHFD1-204ENST00000553405 ZBTB3Q9H5J0 574 aa19.03■□□□□ 0.64
MTHFD1-204ENST00000553405 MSH5O43196 834 aa19.02■□□□□ 0.64
MTHFD1-204ENST00000553405 MSL1Q68DK7 614 aa19.02■□□□□ 0.64
MTHFD1-204ENST00000553405 GIGYF2Q6Y7W6 1299 aaKnown RBP19.02■□□□□ 0.64
MTHFD1-204ENST00000553405 KIF6Q6ZMV9 814 aa19.02■□□□□ 0.64
MTHFD1-204ENST00000553405 ANKRD13DQ6ZTN6 518 aa19.02■□□□□ 0.64
MTHFD1-204ENST00000553405 NRXN2Q9P2S2 1712 aa19.02■□□□□ 0.63
MTHFD1-204ENST00000553405 BCAR3O75815 825 aa19.01■□□□□ 0.63
MTHFD1-204ENST00000553405 DDR1Q08345 913 aa19.01■□□□□ 0.63
MTHFD1-204ENST00000553405 NFIXQ14938 502 aa19.01■□□□□ 0.63
MTHFD1-204ENST00000553405 TBC1D9BQ66K14 1250 aa19.01■□□□□ 0.63
MTHFD1-204ENST00000553405 NLGN1Q8N2Q7 840 aa19.01■□□□□ 0.63
MTHFD1-204ENST00000553405 SMC4Q9NTJ3 1288 aa19.01■□□□□ 0.63
MTHFD1-204ENST00000553405 KSR2Q6VAB6 950 aa19■□□□□ 0.63
MTHFD1-204ENST00000553405 ZNF34Q8IZ26 560 aa19■□□□□ 0.63
MTHFD1-204ENST00000553405 PI4KAP2A4QPH2 592 aa18.99■□□□□ 0.63
MTHFD1-204ENST00000553405 PI4KAP1Q8N8J0 262 aa18.99■□□□□ 0.63
MTHFD1-204ENST00000553405 ATF5Q9Y2D1 282 aaPredicted RBP18.99■□□□□ 0.63
MTHFD1-204ENST00000553405 LRP5O75197 1615 aa18.99■□□□□ 0.63
MTHFD1-204ENST00000553405 UBN2Q6ZU65 1347 aa18.99■□□□□ 0.63
MTHFD1-204ENST00000553405 AFDNP55196 1824 aaKnown RBP18.98■□□□□ 0.63
MTHFD1-204ENST00000553405 POLRMTO00411 1230 aaKnown RBP18.98■□□□□ 0.63
MTHFD1-204ENST00000553405 NPM2Q86SE8 214 aaKnown RBP18.98■□□□□ 0.63
MTHFD1-204ENST00000553405 ARXQ96QS3 562 aa18.98■□□□□ 0.63
MTHFD1-204ENST00000553405 ISCA1Q9BUE6 129 aa18.98■□□□□ 0.63
MTHFD1-204ENST00000553405 PTPRCP08575 1304 aa18.98■□□□□ 0.63
MTHFD1-204ENST00000553405 N4BP2Q86UW6 1770 aaPredicted RBP18.97■□□□□ 0.63
MTHFD1-204ENST00000553405 MMP10P09238 476 aa18.97■□□□□ 0.63
MTHFD1-204ENST00000553405 FKBP5Q13451 457 aaPredicted RBP18.97■□□□□ 0.63
MTHFD1-204ENST00000553405 TCIRG1Q13488 830 aa18.97■□□□□ 0.63
MTHFD1-204ENST00000553405 METTL22Q9BUU2 404 aaPredicted RBP18.97■□□□□ 0.63
MTHFD1-204ENST00000553405 MAP3K2Q9Y2U5 619 aa18.97■□□□□ 0.63
MTHFD1-204ENST00000553405 F6X3S4 739 aa18.96■□□□□ 0.63
MTHFD1-204ENST00000553405 IGKV5-2P06315 115 aa18.96■□□□□ 0.63
MTHFD1-204ENST00000553405 TRIM28Q13263 835 aaKnown RBP18.96■□□□□ 0.63
MTHFD1-204ENST00000553405 RCAN3Q9UKA8 241 aa18.96■□□□□ 0.63
MTHFD1-204ENST00000553405 NOB1Q9ULX3 412 aaKnown RBP18.96■□□□□ 0.63
MTHFD1-204ENST00000553405 ZNF652Q9Y2D9 606 aa18.96■□□□□ 0.63
MTHFD1-204ENST00000553405 DDX58O95786 925 aaKnown RBP18.95■□□□□ 0.62
MTHFD1-204ENST00000553405 RIC3Q7Z5B4 369 aa18.95■□□□□ 0.62
MTHFD1-204ENST00000553405 DNAAF4Q8WXU2 420 aa18.95■□□□□ 0.62
MTHFD1-204ENST00000553405 ARHGAP45Q92619 1136 aa18.95■□□□□ 0.62
MTHFD1-204ENST00000553405 SPON1Q9HCB6 807 aa18.95■□□□□ 0.62
MTHFD1-204ENST00000553405 PXDNLA1KZ92 1463 aa18.95■□□□□ 0.62
MTHFD1-204ENST00000553405 CARMIL3Q8ND23 1372 aa18.94■□□□□ 0.62
MTHFD1-204ENST00000553405 IBTKQ9P2D0 1353 aaPredicted RBP18.94■□□□□ 0.62
MTHFD1-204ENST00000553405 HSP90AB3PQ58FF7 597 aa18.94■□□□□ 0.62
MTHFD1-204ENST00000553405 NLRP10Q86W26 655 aa18.94■□□□□ 0.62
MTHFD1-204ENST00000553405 TNNQ9UQP3 1299 aa18.94■□□□□ 0.62
MTHFD1-204ENST00000553405 NIP7Q9Y221 180 aaKnown RBP eCLIP18.94■□□□□ 0.62
MTHFD1-204ENST00000553405 KIF16BQ96L93 1317 aa18.94■□□□□ 0.62
MTHFD1-204ENST00000553405 KIF13BQ9NQT8 1826 aa18.93■□□□□ 0.62
MTHFD1-204ENST00000553405 GPTP24298 496 aa18.93■□□□□ 0.62
MTHFD1-204ENST00000553405 BEND3Q5T5X7 828 aa18.93■□□□□ 0.62
MTHFD1-204ENST00000553405 C10orf71Q711Q0 1435 aa18.92■□□□□ 0.62
MTHFD1-204ENST00000553405 ATP5J2-PTCD1G3V325 749 aa18.92■□□□□ 0.62
MTHFD1-204ENST00000553405 NTSR2O95665 410 aa18.92■□□□□ 0.62
MTHFD1-204ENST00000553405 TRIM27P14373 513 aa18.92■□□□□ 0.62
MTHFD1-204ENST00000553405 SUSD4Q5VX71 490 aa18.92■□□□□ 0.62
MTHFD1-204ENST00000553405 BICDL1Q6ZP65 573 aa18.92■□□□□ 0.62
MTHFD1-204ENST00000553405 SETDB2Q96T68 719 aa18.92■□□□□ 0.62
MTHFD1-204ENST00000553405 MYD88Q99836 296 aa18.92■□□□□ 0.62
MTHFD1-204ENST00000553405 ABCC4O15439 1325 aa18.92■□□□□ 0.62
MTHFD1-204ENST00000553405 KIAA1551Q9HCM1 1747 aa18.91■□□□□ 0.62
MTHFD1-204ENST00000553405 ANKRD31Q8N7Z5 1873 aa18.91■□□□□ 0.62
MTHFD1-204ENST00000553405 NEURL1BA8MQ27 555 aa18.9■□□□□ 0.62
MTHFD1-204ENST00000553405 SERPINB2P05120 415 aa18.9■□□□□ 0.62
MTHFD1-204ENST00000553405 PARP10Q53GL7 1025 aa18.9■□□□□ 0.62
MTHFD1-204ENST00000553405 PRR5LQ6MZQ0 368 aa18.9■□□□□ 0.62
MTHFD1-204ENST00000553405 CWF19L2Q2TBE0 894 aaKnown RBP18.89■□□□□ 0.61
MTHFD1-204ENST00000553405 ATF7IPQ6VMQ6 1270 aa18.89■□□□□ 0.61
MTHFD1-204ENST00000553405 CCDC191Q8NCU4 936 aa18.89■□□□□ 0.61
MTHFD1-204ENST00000553405 LINS1Q8NG48 757 aa18.89■□□□□ 0.61
MTHFD1-204ENST00000553405 API5Q9BZZ5 524 aaKnown RBP18.89■□□□□ 0.61
MTHFD1-204ENST00000553405 PARP3Q9Y6F1 533 aa18.89■□□□□ 0.61
MTHFD1-204ENST00000553405 ABCC12Q96J65 1359 aa18.89■□□□□ 0.61
MTHFD1-204ENST00000553405 TNRC6CQ9HCJ0 1690 aaKnown RBP18.89■□□□□ 0.61
MTHFD1-204ENST00000553405 POLD1P28340 1107 aa18.88■□□□□ 0.61
MTHFD1-204ENST00000553405 RIC1Q4ADV7 1423 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms