RNA–Protein interactions for RNA: ENST00000553404.5

LIN52-201, Transcript of lin-52 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN52, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52-201ENST00000553404 RNMTO43148 476 aaKnown RBP12.14□□□□□ -0.47
LIN52-201ENST00000553404 SLC39A6Q13433 755 aa12.14□□□□□ -0.47
LIN52-201ENST00000553404 ZHX1Q9UKY1 873 aaPredicted RBP12.14□□□□□ -0.47
LIN52-201ENST00000553404 UQCRHLA0A096LP55 91 aa12.14□□□□□ -0.47
LIN52-201ENST00000553404 DCAF8L1A6NGE4 600 aa12.14□□□□□ -0.47
LIN52-201ENST00000553404 UQCRHP07919 91 aa12.14□□□□□ -0.47
LIN52-201ENST00000553404 MFAP1P55081 439 aaKnown RBP12.14□□□□□ -0.47
LIN52-201ENST00000553404 PHACTR3Q96KR7 559 aa12.14□□□□□ -0.47
LIN52-201ENST00000553404 CFAP53Q96M91 514 aa12.14□□□□□ -0.47
LIN52-201ENST00000553404 FLAD1Q8NFF5 587 aa12.13□□□□□ -0.47
LIN52-201ENST00000553404 NCLP19338 710 aaKnown RBP12.12□□□□□ -0.47
LIN52-201ENST00000553404 GTF2E1P29083 439 aaPredicted RBP12.12□□□□□ -0.47
LIN52-201ENST00000553404 NLGN2Q8NFZ4 835 aa12.12□□□□□ -0.47
LIN52-201ENST00000553404 PANK1Q8TE04 598 aa12.12□□□□□ -0.47
LIN52-201ENST00000553404 TNPO1Q92973 898 aaKnown RBP12.12□□□□□ -0.47
LIN52-201ENST00000553404 SLC52A2Q9HAB3 445 aa12.12□□□□□ -0.47
LIN52-201ENST00000553404 U2AF1L5P0DN76 240 aaPredicted RBP12.12□□□□□ -0.47
LIN52-201ENST00000553404 PRKAR2BP31323 418 aa12.12□□□□□ -0.47
LIN52-201ENST00000553404 U2AF1Q01081 240 aaKnown RBP eCLIP12.12□□□□□ -0.47
LIN52-201ENST00000553404 TRMT2AQ8IZ69 625 aaKnown RBP12.12□□□□□ -0.47
LIN52-201ENST00000553404 PDZRN3Q9UPQ7 1066 aa12.12□□□□□ -0.47
LIN52-201ENST00000553404 E9PSI1 815 aa12.11□□□□□ -0.47
LIN52-201ENST00000553404 HMGB2P26583 209 aaKnown RBP12.11□□□□□ -0.47
LIN52-201ENST00000553404 PRDM10Q9NQV6 1147 aa12.11□□□□□ -0.47
LIN52-201ENST00000553404 BCCIPQ9P287 314 aaKnown RBP eCLIP12.11□□□□□ -0.47
LIN52-201ENST00000553404 UBR3Q6ZT12 1888 aa12.11□□□□□ -0.47
LIN52-201ENST00000553404 SCN11AQ9UI33 1791 aa12.11□□□□□ -0.47
LIN52-201ENST00000553404 DYNC1I1O14576 645 aa12.11□□□□□ -0.47
LIN52-201ENST00000553404 SSFA2P28290 1259 aa12.11□□□□□ -0.47
LIN52-201ENST00000553404 IL17REQ8NFR9 667 aa12.11□□□□□ -0.47
LIN52-201ENST00000553404 RTCBQ9Y3I0 505 aaKnown RBP12.11□□□□□ -0.47
LIN52-201ENST00000553404 YY1P25490 414 aa12.1□□□□□ -0.47
LIN52-201ENST00000553404 TRAPPC3LQ5T215 181 aa12.1□□□□□ -0.47
LIN52-201ENST00000553404 CCDC146Q8IYE0 955 aa12.1□□□□□ -0.47
LIN52-201ENST00000553404 ARHGEF1Q92888 912 aaKnown RBP12.1□□□□□ -0.47
LIN52-201ENST00000553404 RWDD1Q9H446 243 aaPredicted RBP12.1□□□□□ -0.47
LIN52-201ENST00000553404 SPINK5Q9NQ38 1064 aaPredicted RBP12.1□□□□□ -0.47
LIN52-201ENST00000553404 GOLGA6L22H0YM25 854 aa12.09□□□□□ -0.47
LIN52-201ENST00000553404 CRKLP46109 303 aaKnown RBP12.09□□□□□ -0.47
LIN52-201ENST00000553404 GPR162Q16538 588 aa12.09□□□□□ -0.47
LIN52-201ENST00000553404 HS1BP3Q53T59 392 aa12.09□□□□□ -0.47
LIN52-201ENST00000553404 UTP14CQ5TAP6 766 aaKnown RBP12.09□□□□□ -0.47
LIN52-201ENST00000553404 DNAJC10Q8IXB1 793 aa12.09□□□□□ -0.47
LIN52-201ENST00000553404 GNAT3A8MTJ3 354 aa12.09□□□□□ -0.47
LIN52-201ENST00000553404 CSPP1Q1MSJ5 1256 aa12.09□□□□□ -0.47
LIN52-201ENST00000553404 GAS2L2Q8NHY3 880 aa12.09□□□□□ -0.47
LIN52-201ENST00000553404 WWC3Q9ULE0 1092 aa12.09□□□□□ -0.47
LIN52-201ENST00000553404 CIZ1Q9ULV3 898 aaPredicted RBP12.09□□□□□ -0.47
LIN52-201ENST00000553404 MYH14Q7Z406 1995 aaKnown RBP12.09□□□□□ -0.47
LIN52-201ENST00000553404 COL24A1Q17RW2 1714 aa12.08□□□□□ -0.48
LIN52-201ENST00000553404 RPS6KA4O75676 772 aa12.08□□□□□ -0.48
LIN52-201ENST00000553404 DMTNQ08495 405 aa12.08□□□□□ -0.48
LIN52-201ENST00000553404 RC3H1Q5TC82 1133 aaKnown RBP12.08□□□□□ -0.48
LIN52-201ENST00000553404 CNKSR2Q8WXI2 1034 aa12.08□□□□□ -0.48
LIN52-201ENST00000553404 APAF1O14727 1248 aa12.08□□□□□ -0.48
LIN52-201ENST00000553404 ZNF500O60304 480 aaPredicted RBP12.08□□□□□ -0.48
LIN52-201ENST00000553404 CNTNAP4Q9C0A0 1308 aa12.07□□□□□ -0.48
LIN52-201ENST00000553404 MAP3K5Q99683 1374 aa12.07□□□□□ -0.48
LIN52-201ENST00000553404 RFC4P35249 363 aa12.07□□□□□ -0.48
LIN52-201ENST00000553404 NOL7Q9UMY1 257 aaKnown RBP12.07□□□□□ -0.48
LIN52-201ENST00000553404 DDIT3P35638 169 aa12.06□□□□□ -0.48
LIN52-201ENST00000553404 TEFQ10587 303 aa12.06□□□□□ -0.48
LIN52-201ENST00000553404 RAB3GAP1Q15042 981 aa12.06□□□□□ -0.48
LIN52-201ENST00000553404 INTS5Q6P9B9 1019 aaKnown RBP12.06□□□□□ -0.48
LIN52-201ENST00000553404 CCDC94Q9BW85 323 aaPredicted RBP12.06□□□□□ -0.48
LIN52-201ENST00000553404 PCDHB15Q9Y5E8 787 aa12.06□□□□□ -0.48
LIN52-201ENST00000553404 FCHSD2O94868 740 aa12.06□□□□□ -0.48
LIN52-201ENST00000553404 MMP10P09238 476 aa12.06□□□□□ -0.48
LIN52-201ENST00000553404 DCTN1Q14203 1278 aa12.06□□□□□ -0.48
LIN52-201ENST00000553404 SRP68Q9UHB9 627 aaKnown RBP12.06□□□□□ -0.48
LIN52-201ENST00000553404 KCNQ3O43525 872 aa12.05□□□□□ -0.48
LIN52-201ENST00000553404 MCM10Q7L590 875 aa12.05□□□□□ -0.48
LIN52-201ENST00000553404 TEX2Q8IWB9 1127 aa12.05□□□□□ -0.48
LIN52-201ENST00000553404 SMC5Q8IY18 1101 aa12.05□□□□□ -0.48
LIN52-201ENST00000553404 ZFP91Q96JP5 570 aaPredicted RBP12.05□□□□□ -0.48
LIN52-201ENST00000553404 DDX49Q9Y6V7 483 aaKnown RBP12.05□□□□□ -0.48
LIN52-201ENST00000553404 CYP19A1P11511 503 aaPredicted RBP12.05□□□□□ -0.48
LIN52-201ENST00000553404 GYS1P13807 737 aa12.05□□□□□ -0.48
LIN52-201ENST00000553404 SASS6Q6UVJ0 657 aa12.05□□□□□ -0.48
LIN52-201ENST00000553404 COL5A3P25940 1745 aaPredicted RBP12.05□□□□□ -0.48
LIN52-201ENST00000553404 YBX3P16989 372 aaKnown RBP eCLIP12.04□□□□□ -0.48
LIN52-201ENST00000553404 FTSJ3Q8IY81 847 aaKnown RBP12.04□□□□□ -0.48
LIN52-201ENST00000553404 TTC5Q8N0Z6 440 aa12.04□□□□□ -0.48
LIN52-201ENST00000553404 ZNF496Q96IT1 587 aaPredicted RBP12.04□□□□□ -0.48
LIN52-201ENST00000553404 MRC1P22897 1456 aa12.04□□□□□ -0.48
LIN52-201ENST00000553404 CHRM1P11229 460 aaPredicted RBP12.04□□□□□ -0.48
LIN52-201ENST00000553404 ZNF790Q6PG37 636 aa12.04□□□□□ -0.48
LIN52-201ENST00000553404 SNX21Q969T3 373 aa12.04□□□□□ -0.48
LIN52-201ENST00000553404 CCDC87Q9NVE4 849 aa12.04□□□□□ -0.48
LIN52-201ENST00000553404 CD2APQ9Y5K6 639 aa12.04□□□□□ -0.48
LIN52-201ENST00000553404 ZNF831Q5JPB2 1677 aa12.03□□□□□ -0.48
LIN52-201ENST00000553404 TJP1Q07157 1748 aa12.03□□□□□ -0.48
LIN52-201ENST00000553404 NLGN1Q8N2Q7 840 aa12.03□□□□□ -0.48
LIN52-201ENST00000553404 ZBTB1Q9Y2K1 713 aa12.03□□□□□ -0.48
LIN52-201ENST00000553404 KLHL40Q2TBA0 621 aa12.03□□□□□ -0.48
LIN52-201ENST00000553404 KCPQ6ZWJ8 1503 aa12.03□□□□□ -0.48
LIN52-201ENST00000553404 RTF1Q92541 710 aaKnown RBP12.03□□□□□ -0.48
LIN52-201ENST00000553404 IBTKQ9P2D0 1353 aaPredicted RBP12.03□□□□□ -0.48
LIN52-201ENST00000553404 ADAMTS7Q9UKP4 1686 aa12.03□□□□□ -0.48
LIN52-201ENST00000553404 BTBD11A6QL63 1104 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms