RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 LARGE1O95461 756 aa20.99■□□□□ 0.95
SYNE3-202ENST00000553340 HOXC9P31274 260 aa20.99■□□□□ 0.95
SYNE3-202ENST00000553340 NLRP6P59044 892 aa20.99■□□□□ 0.95
SYNE3-202ENST00000553340 PLCB2Q00722 1185 aa20.99■□□□□ 0.95
SYNE3-202ENST00000553340 ARID3AQ99856 593 aa20.99■□□□□ 0.95
SYNE3-202ENST00000553340 OS9Q13438 667 aaPredicted RBP20.98■□□□□ 0.95
SYNE3-202ENST00000553340 JAKMIP1Q96N16 626 aaKnown RBP20.98■□□□□ 0.95
SYNE3-202ENST00000553340 TM6SF1Q9BZW5 370 aa20.98■□□□□ 0.95
SYNE3-202ENST00000553340 TPM3P06753 285 aa20.98■□□□□ 0.95
SYNE3-202ENST00000553340 EIF2S2P20042 333 aaKnown RBP20.98■□□□□ 0.95
SYNE3-202ENST00000553340 C17orf53Q8N3J3 647 aaPredicted RBP20.98■□□□□ 0.95
SYNE3-202ENST00000553340 CCDC94Q9BW85 323 aaPredicted RBP20.98■□□□□ 0.95
SYNE3-202ENST00000553340 CYP46A1Q9Y6A2 500 aa20.98■□□□□ 0.95
SYNE3-202ENST00000553340 LTKP29376 864 aa20.97■□□□□ 0.95
SYNE3-202ENST00000553340 DNAAF4Q8WXU2 420 aa20.97■□□□□ 0.95
SYNE3-202ENST00000553340 CHMP4AQ9BY43 222 aa20.97■□□□□ 0.95
SYNE3-202ENST00000553340 CRYBG1Q9Y4K1 1723 aa20.97■□□□□ 0.95
SYNE3-202ENST00000553340 BEND3Q5T5X7 828 aa20.97■□□□□ 0.95
SYNE3-202ENST00000553340 SMAP1Q8IYB5 467 aaPredicted RBP20.97■□□□□ 0.95
SYNE3-202ENST00000553340 ZSWIM6Q9HCJ5 1215 aa20.97■□□□□ 0.95
SYNE3-202ENST00000553340 PIK3C2AO00443 1686 aa20.97■□□□□ 0.95
SYNE3-202ENST00000553340 PRPF40BQ6NWY9 871 aaKnown RBP20.96■□□□□ 0.95
SYNE3-202ENST00000553340 CLASRPQ8N2M8 674 aaKnown RBP20.96■□□□□ 0.95
SYNE3-202ENST00000553340 SLC26A8Q96RN1 970 aa20.96■□□□□ 0.95
SYNE3-202ENST00000553340 PTH1RQ03431 593 aa20.96■□□□□ 0.95
SYNE3-202ENST00000553340 NWD1Q149M9 1564 aa20.96■□□□□ 0.95
SYNE3-202ENST00000553340 PI4KAP2A4QPH2 592 aa20.95■□□□□ 0.94
SYNE3-202ENST00000553340 CCDC192P0DO97 292 aa20.95■□□□□ 0.94
SYNE3-202ENST00000553340 ADCK5Q3MIX3 580 aa20.95■□□□□ 0.94
SYNE3-202ENST00000553340 PI4KAP1Q8N8J0 262 aa20.95■□□□□ 0.94
SYNE3-202ENST00000553340 VPS37CA5D8V6 355 aaPredicted RBP20.95■□□□□ 0.94
SYNE3-202ENST00000553340 KCNB2Q92953 911 aa20.95■□□□□ 0.94
SYNE3-202ENST00000553340 LTV1Q96GA3 475 aaPredicted RBP20.95■□□□□ 0.94
SYNE3-202ENST00000553340 KIF3AQ9Y496 699 aa20.95■□□□□ 0.94
SYNE3-202ENST00000553340 GOLGA6L6A8MZA4 724 aa20.94■□□□□ 0.94
SYNE3-202ENST00000553340 GPATCH3Q96I76 525 aa20.94■□□□□ 0.94
SYNE3-202ENST00000553340 ECHDC1Q9NTX5 307 aa20.94■□□□□ 0.94
SYNE3-202ENST00000553340 AMOTL2Q9Y2J4 779 aa20.94■□□□□ 0.94
SYNE3-202ENST00000553340 HOXB7P09629 217 aa20.94■□□□□ 0.94
SYNE3-202ENST00000553340 PDIA4P13667 645 aaKnown RBP20.94■□□□□ 0.94
SYNE3-202ENST00000553340 ZKSCAN1P17029 563 aaPredicted RBP20.94■□□□□ 0.94
SYNE3-202ENST00000553340 KIAA1524Q8TCG1 905 aa20.94■□□□□ 0.94
SYNE3-202ENST00000553340 CHPF2Q9P2E5 772 aa20.94■□□□□ 0.94
SYNE3-202ENST00000553340 AP5Z1O43299 807 aa20.93■□□□□ 0.94
SYNE3-202ENST00000553340 JARID2Q92833 1246 aaPredicted RBP20.93■□□□□ 0.94
SYNE3-202ENST00000553340 EIF4A1P60842 406 aaKnown RBP20.92■□□□□ 0.94
SYNE3-202ENST00000553340 ME3Q16798 604 aa20.92■□□□□ 0.94
SYNE3-202ENST00000553340 MTX1Q13505 466 aa20.92■□□□□ 0.94
SYNE3-202ENST00000553340 NECTIN1Q15223 517 aa20.92■□□□□ 0.94
SYNE3-202ENST00000553340 ZNF710Q8N1W2 664 aa20.92■□□□□ 0.94
SYNE3-202ENST00000553340 TSC1Q92574 1164 aa20.92■□□□□ 0.94
SYNE3-202ENST00000553340 CEMIPQ8WUJ3 1361 aa20.92■□□□□ 0.94
SYNE3-202ENST00000553340 KRT85P78386 507 aa20.91■□□□□ 0.94
SYNE3-202ENST00000553340 EVI5LQ96CN4 794 aa20.91■□□□□ 0.94
SYNE3-202ENST00000553340 PRDM4Q9UKN5 801 aa20.91■□□□□ 0.94
SYNE3-202ENST00000553340 RGPD8O14715 1765 aaPredicted RBP20.91■□□□□ 0.94
SYNE3-202ENST00000553340 IFIT2P09913 472 aaKnown RBP20.91■□□□□ 0.94
SYNE3-202ENST00000553340 ST3GAL1Q11201 340 aa20.91■□□□□ 0.94
SYNE3-202ENST00000553340 CHAF1AQ13111 956 aaPredicted RBP20.91■□□□□ 0.94
SYNE3-202ENST00000553340 LARP1BQ659C4 914 aaKnown RBP20.91■□□□□ 0.94
SYNE3-202ENST00000553340 CCDC171Q6TFL3 1326 aa20.91■□□□□ 0.94
SYNE3-202ENST00000553340 NUTM2GQ5VZR2 741 aa20.91■□□□□ 0.94
SYNE3-202ENST00000553340 ERC1Q8IUD2 1116 aa20.91■□□□□ 0.94
SYNE3-202ENST00000553340 KCNF1Q9H3M0 494 aa20.91■□□□□ 0.94
SYNE3-202ENST00000553340 DIP2AQ14689 1571 aa20.9■□□□□ 0.94
SYNE3-202ENST00000553340 DTNBO60941 627 aa20.9■□□□□ 0.94
SYNE3-202ENST00000553340 MAP3K11Q16584 847 aa20.9■□□□□ 0.94
SYNE3-202ENST00000553340 NECAB1Q8N987 351 aa20.9■□□□□ 0.94
SYNE3-202ENST00000553340 SPC24Q8NBT2 197 aa20.9■□□□□ 0.94
SYNE3-202ENST00000553340 FAM200AQ8TCP9 573 aa20.9■□□□□ 0.94
SYNE3-202ENST00000553340 EID1Q9Y6B2 187 aa20.9■□□□□ 0.94
SYNE3-202ENST00000553340 KCNJ4P48050 445 aa20.89■□□□□ 0.93
SYNE3-202ENST00000553340 USHBP1Q8N6Y0 703 aa20.89■□□□□ 0.93
SYNE3-202ENST00000553340 PYCARDQ9ULZ3 195 aa20.89■□□□□ 0.93
SYNE3-202ENST00000553340 RBM8AQ9Y5S9 174 aaKnown RBP20.89■□□□□ 0.93
SYNE3-202ENST00000553340 ELP1O95163 1332 aa20.89■□□□□ 0.93
SYNE3-202ENST00000553340 PDCP20941 246 aa20.89■□□□□ 0.93
SYNE3-202ENST00000553340 TTC6Q86TZ1 520 aa20.89■□□□□ 0.93
SYNE3-202ENST00000553340 NUP62CLQ9H1M0 184 aa20.89■□□□□ 0.93
SYNE3-202ENST00000553340 PSMA5P28066 241 aa20.88■□□□□ 0.93
SYNE3-202ENST00000553340 CREB3L3Q68CJ9 461 aa20.88■□□□□ 0.93
SYNE3-202ENST00000553340 TPCN1Q9ULQ1 816 aa20.88■□□□□ 0.93
SYNE3-202ENST00000553340 ADCY9O60503 1353 aa20.88■□□□□ 0.93
SYNE3-202ENST00000553340 HIP1O00291 1037 aa20.88■□□□□ 0.93
SYNE3-202ENST00000553340 C9orf78Q9NZ63 289 aaPredicted RBP20.88■□□□□ 0.93
SYNE3-202ENST00000553340 HDAC5Q9UQL6 1122 aa20.88■□□□□ 0.93
SYNE3-202ENST00000553340 ABTB2Q8N961 1025 aa20.87■□□□□ 0.93
SYNE3-202ENST00000553340 DDX54Q8TDD1 881 aaKnown RBP20.87■□□□□ 0.93
SYNE3-202ENST00000553340 ANXA1P04083 346 aa20.86■□□□□ 0.93
SYNE3-202ENST00000553340 MAP4K1Q92918 833 aa20.86■□□□□ 0.93
SYNE3-202ENST00000553340 BCL2L12Q9HB09 334 aa20.86■□□□□ 0.93
SYNE3-202ENST00000553340 LGR6Q9HBX8 967 aa20.86■□□□□ 0.93
SYNE3-202ENST00000553340 ALDH1L1O75891 902 aa20.86■□□□□ 0.93
SYNE3-202ENST00000553340 TYRO3Q06418 890 aa20.86■□□□□ 0.93
SYNE3-202ENST00000553340 CDC37L1Q7L3B6 337 aa20.86■□□□□ 0.93
SYNE3-202ENST00000553340 AACSQ86V21 672 aa20.86■□□□□ 0.93
SYNE3-202ENST00000553340 CHMP3Q9Y3E7 222 aa20.86■□□□□ 0.93
SYNE3-202ENST00000553340 CHD2O14647 1828 aaKnown RBP20.86■□□□□ 0.93
SYNE3-202ENST00000553340 ANKRD1Q15327 319 aa20.85■□□□□ 0.93
SYNE3-202ENST00000553340 FERMT3Q86UX7 667 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms