RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, human

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-217	ENST00000553065	RRP7A	Q9Y3A4	280 aa	Known RBP	13.98	□□□□□ -0.17
DDX23-217	ENST00000553065	KDM3B	Q7LBC6	1761 aa		13.98	□□□□□ -0.17
DDX23-217	ENST00000553065	BCOR	Q6W2J9	1755 aa		13.97	□□□□□ -0.17
DDX23-217	ENST00000553065	TOMM70	O94826	608 aa		13.97	□□□□□ -0.17
DDX23-217	ENST00000553065	PDE6B	P35913	854 aa		13.97	□□□□□ -0.17
DDX23-217	ENST00000553065	CCDC146	Q8IYE0	955 aa		13.97	□□□□□ -0.17
DDX23-217	ENST00000553065	NGEF	Q8N5V2	710 aa		13.97	□□□□□ -0.17
DDX23-217	ENST00000553065	CNBD1	Q8NA66	436 aa		13.97	□□□□□ -0.17
DDX23-217	ENST00000553065	PNISR	Q8TF01	805 aa	Known RBP	13.97	□□□□□ -0.17
DDX23-217	ENST00000553065	ADAMTS8	Q9UP79	889 aa		13.97	□□□□□ -0.17
DDX23-217	ENST00000553065	SLX4	Q8IY92	1834 aa		13.97	□□□□□ -0.17
DDX23-217	ENST00000553065	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.96	□□□□□ -0.17
DDX23-217	ENST00000553065	COL11A2	P13942	1736 aa	Predicted RBP	13.96	□□□□□ -0.17
DDX23-217	ENST00000553065	RGL2	O15211	777 aa		13.96	□□□□□ -0.17
DDX23-217	ENST00000553065	PROSER3	Q2NL68	480 aa		13.96	□□□□□ -0.17
DDX23-217	ENST00000553065	OLFM4	Q6UX06	510 aa		13.96	□□□□□ -0.17
DDX23-217	ENST00000553065	DNAJC5G	Q8N7S2	189 aa		13.96	□□□□□ -0.17
DDX23-217	ENST00000553065	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
DDX23-217	ENST00000553065	FAM177B	A6PVY3	158 aa		13.95	□□□□□ -0.18
DDX23-217	ENST00000553065	LMNB1	P20700	586 aa		13.95	□□□□□ -0.18
DDX23-217	ENST00000553065	KRT24	Q2M2I5	525 aa		13.95	□□□□□ -0.18
DDX23-217	ENST00000553065	STYK1	Q6J9G0	422 aa		13.95	□□□□□ -0.18
DDX23-217	ENST00000553065	SLC51A	Q86UW1	340 aa		13.95	□□□□□ -0.18
DDX23-217	ENST00000553065	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.95	□□□□□ -0.18
DDX23-217	ENST00000553065	ERVV-1	B6SEH8	477 aa		13.94	□□□□□ -0.18
DDX23-217	ENST00000553065	CHL1	O00533	1208 aa		13.94	□□□□□ -0.18
DDX23-217	ENST00000553065	ANXA1	P04083	346 aa		13.94	□□□□□ -0.18
DDX23-217	ENST00000553065	MYL6B	P14649	208 aa		13.94	□□□□□ -0.18
DDX23-217	ENST00000553065	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.94	□□□□□ -0.18
DDX23-217	ENST00000553065	ZNF34	Q8IZ26	560 aa		13.94	□□□□□ -0.18
DDX23-217	ENST00000553065	MASTL	Q96GX5	879 aa		13.94	□□□□□ -0.18
DDX23-217	ENST00000553065	PNN	Q9H307	717 aa	Known RBP	13.94	□□□□□ -0.18
DDX23-217	ENST00000553065	PDZRN3	Q9UPQ7	1066 aa		13.94	□□□□□ -0.18
DDX23-217	ENST00000553065	MAP3K15	Q6ZN16	1313 aa		13.93	□□□□□ -0.18
DDX23-217	ENST00000553065	UBN2	Q6ZU65	1347 aa		13.93	□□□□□ -0.18
DDX23-217	ENST00000553065	GLTPD2	A6NH11	291 aa		13.93	□□□□□ -0.18
DDX23-217	ENST00000553065	CCDC184	Q52MB2	194 aa		13.93	□□□□□ -0.18
DDX23-217	ENST00000553065	PRPF40B	Q6NWY9	871 aa	Known RBP	13.93	□□□□□ -0.18
DDX23-217	ENST00000553065	TPTE2	Q6XPS3	522 aa		13.93	□□□□□ -0.18
DDX23-217	ENST00000553065	NUTM1	Q86Y26	1132 aa		13.93	□□□□□ -0.18
DDX23-217	ENST00000553065	TSPYL4	Q9UJ04	414 aa		13.93	□□□□□ -0.18
DDX23-217	ENST00000553065	CCDC88A	Q3V6T2	1871 aa		13.93	□□□□□ -0.18
DDX23-217	ENST00000553065	MAPK8IP3	Q9UPT6	1336 aa		13.92	□□□□□ -0.18
DDX23-217	ENST00000553065	NEFM	P07197	916 aa		13.92	□□□□□ -0.18
DDX23-217	ENST00000553065	ST5	P78524	1137 aa		13.92	□□□□□ -0.18
DDX23-217	ENST00000553065	NEUROD2	Q15784	382 aa		13.92	□□□□□ -0.18
DDX23-217	ENST00000553065	ERFE	Q4G0M1	354 aa		13.92	□□□□□ -0.18
DDX23-217	ENST00000553065	SUSD4	Q5VX71	490 aa		13.92	□□□□□ -0.18
DDX23-217	ENST00000553065	C3orf67	Q6ZVT6	689 aa		13.92	□□□□□ -0.18
DDX23-217	ENST00000553065	NPM2	Q86SE8	214 aa	Known RBP	13.92	□□□□□ -0.18
DDX23-217	ENST00000553065	CNKSR1	Q969H4	720 aa		13.92	□□□□□ -0.18
DDX23-217	ENST00000553065	BABAM1	Q9NWV8	329 aa		13.92	□□□□□ -0.18
DDX23-217	ENST00000553065	FER1L6	Q2WGJ9	1857 aa		13.92	□□□□□ -0.18
DDX23-217	ENST00000553065	EIF2S2	P20042	333 aa	Known RBP	13.91	□□□□□ -0.18
DDX23-217	ENST00000553065	GPT	P24298	496 aa		13.91	□□□□□ -0.18
DDX23-217	ENST00000553065	HTRA3	P83110	453 aa		13.91	□□□□□ -0.18
DDX23-217	ENST00000553065	RBM46	Q8TBY0	533 aa	Known RBP	13.91	□□□□□ -0.18
DDX23-217	ENST00000553065	RUNDC1	Q96C34	613 aa		13.91	□□□□□ -0.18
DDX23-217	ENST00000553065	ZBTB3	Q9H5J0	574 aa		13.91	□□□□□ -0.18
DDX23-217	ENST00000553065	ZNF652	Q9Y2D9	606 aa		13.91	□□□□□ -0.18
DDX23-217	ENST00000553065	ABCC12	Q96J65	1359 aa		13.91	□□□□□ -0.18
DDX23-217	ENST00000553065	LTBP3	Q9NS15	1303 aa		13.9	□□□□□ -0.18
DDX23-217	ENST00000553065	NPR1	P16066	1061 aa		13.9	□□□□□ -0.18
DDX23-217	ENST00000553065	CRY2	Q49AN0	593 aa		13.9	□□□□□ -0.18
DDX23-217	ENST00000553065	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.9	□□□□□ -0.18
DDX23-217	ENST00000553065	NUP98	P52948	1817 aa		13.9	□□□□□ -0.18
DDX23-217	ENST00000553065	SNED1	Q8TER0	1413 aa		13.9	□□□□□ -0.19
DDX23-217	ENST00000553065	KDM2B	Q8NHM5	1336 aa		13.9	□□□□□ -0.19
DDX23-217	ENST00000553065	LAMB4	A4D0S4	1761 aa		13.89	□□□□□ -0.19
DDX23-217	ENST00000553065	SYNE4	Q8N205	404 aa		13.89	□□□□□ -0.19
DDX23-217	ENST00000553065	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.89	□□□□□ -0.19
DDX23-217	ENST00000553065	PCNT	O95613	3336 aa		13.88	□□□□□ -0.19
DDX23-217	ENST00000553065	NTSR2	O95665	410 aa		13.88	□□□□□ -0.19
DDX23-217	ENST00000553065	ZNF853	P0CG23	659 aa		13.88	□□□□□ -0.19
DDX23-217	ENST00000553065	NECTIN2	Q92692	538 aa		13.88	□□□□□ -0.19
DDX23-217	ENST00000553065	ERBB4	Q15303	1308 aa		13.88	□□□□□ -0.19
DDX23-217	ENST00000553065	DDN	O94850	711 aa	Predicted RBP	13.87	□□□□□ -0.19
DDX23-217	ENST00000553065	VEGFA	P15692	232 aa	Predicted RBP	13.87	□□□□□ -0.19
DDX23-217	ENST00000553065	HOXA10	P31260	410 aa	Predicted RBP	13.87	□□□□□ -0.19
DDX23-217	ENST00000553065	SLC10A5	Q5PT55	438 aa		13.87	□□□□□ -0.19
DDX23-217	ENST00000553065	COPS6	Q7L5N1	327 aa		13.87	□□□□□ -0.19
DDX23-217	ENST00000553065	TAOK3	Q9H2K8	898 aa		13.87	□□□□□ -0.19
DDX23-217	ENST00000553065	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.87	□□□□□ -0.19
DDX23-217	ENST00000553065	NPHP1	O15259	732 aa		13.86	□□□□□ -0.19
DDX23-217	ENST00000553065	POTEI	P0CG38	1075 aa		13.86	□□□□□ -0.19
DDX23-217	ENST00000553065	POTEJ	P0CG39	1038 aa		13.86	□□□□□ -0.19
DDX23-217	ENST00000553065	XAGE3	Q8WTP9	111 aa		13.86	□□□□□ -0.19
DDX23-217	ENST00000553065	CACNA1S	Q13698	1873 aa		13.86	□□□□□ -0.19
DDX23-217	ENST00000553065	APAF1	O14727	1248 aa		13.85	□□□□□ -0.19
DDX23-217	ENST00000553065	APLP1	P51693	650 aa		13.85	□□□□□ -0.19
DDX23-217	ENST00000553065	FSTL1	Q12841	308 aa		13.85	□□□□□ -0.19
DDX23-217	ENST00000553065	KIF6	Q6ZMV9	814 aa		13.85	□□□□□ -0.19
DDX23-217	ENST00000553065	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.85	□□□□□ -0.19
DDX23-217	ENST00000553065	DICER1	Q9UPY3	1922 aa	Known RBP	13.85	□□□□□ -0.19
DDX23-217	ENST00000553065	ARFGEF2	Q9Y6D5	1785 aa		13.85	□□□□□ -0.19
DDX23-217	ENST00000553065	ALDH1B1	P30837	517 aa		13.84	□□□□□ -0.19
DDX23-217	ENST00000553065	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
DDX23-217	ENST00000553065	AIMP1	Q12904	312 aa	Known RBP	13.84	□□□□□ -0.19
DDX23-217	ENST00000553065	ZNF428	Q96B54	188 aa		13.84	□□□□□ -0.19
DDX23-217	ENST00000553065	CFAP44	Q96MT7	982 aa		13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms