RNA–Protein interactions for RNA: ENST00000553029.1

LINC02406-201, Transcript of long intergenic non-protein coding RNA 2406, humanhuman

TSL 3 BASIC

Gene LINC02406, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02406-201ENST00000553029 SLC17A8Q8NDX2 589 aa8.87□□□□□ -0.99
LINC02406-201ENST00000553029 COLQQ9Y215 455 aaPredicted RBP8.87□□□□□ -0.99
LINC02406-201ENST00000553029 RTL1A6NKG5 1358 aa8.86□□□□□ -0.99
LINC02406-201ENST00000553029 C21orf2O43822 256 aa8.86□□□□□ -0.99
LINC02406-201ENST00000553029 TM4SF1P30408 202 aa8.86□□□□□ -0.99
LINC02406-201ENST00000553029 IER5LQ5T953 404 aa8.86□□□□□ -0.99
LINC02406-201ENST00000553029 SLC4A9Q96Q91 983 aa8.86□□□□□ -0.99
LINC02406-201ENST00000553029 TMEM106CQ9BVX2 250 aa8.86□□□□□ -0.99
LINC02406-201ENST00000553029 EDC4Q6P2E9 1401 aaKnown RBP8.86□□□□□ -0.99
LINC02406-201ENST00000553029 CIAPIN1Q6FI81 312 aa8.85□□□□□ -0.99
LINC02406-201ENST00000553029 RNF123Q5XPI4 1314 aa8.84□□□□□ -0.99
LINC02406-201ENST00000553029 ADAMTSL1Q8N6G6 1762 aa8.84□□□□□ -0.99
LINC02406-201ENST00000553029 FMR1Q06787 632 aaKnown RBP eCLIP8.84□□□□□ -0.99
LINC02406-201ENST00000553029 MON2Q7Z3U7 1717 aa8.84□□□□□ -0.99
LINC02406-201ENST00000553029 HDGFL2Q7Z4V5 671 aaPredicted RBP8.84□□□□□ -0.99
LINC02406-201ENST00000553029 PITPNM2Q9BZ72 1349 aa8.83□□□□□ -1
LINC02406-201ENST00000553029 ZNF541Q9H0D2 1346 aa8.83□□□□□ -1
LINC02406-201ENST00000553029 CST9Q5W186 159 aa8.83□□□□□ -1
LINC02406-201ENST00000553029 CTU1Q7Z7A3 348 aaKnown RBP8.83□□□□□ -1
LINC02406-201ENST00000553029 SAPCD2Q86UD0 394 aa8.83□□□□□ -1
LINC02406-201ENST00000553029 ZNF622Q969S3 477 aaKnown RBP eCLIP8.83□□□□□ -1
LINC02406-201ENST00000553029 HHIPL1Q96JK4 782 aa8.83□□□□□ -1
LINC02406-201ENST00000553029 HPS5Q9UPZ3 1129 aa8.83□□□□□ -1
LINC02406-201ENST00000553029 INSRP06213 1382 aa8.83□□□□□ -1
LINC02406-201ENST00000553029 ZPR1O75312 459 aa8.82□□□□□ -1
LINC02406-201ENST00000553029 SERPINB2P05120 415 aa8.82□□□□□ -1
LINC02406-201ENST00000553029 CRKLP46109 303 aaKnown RBP8.82□□□□□ -1
LINC02406-201ENST00000553029 NOGQ13253 232 aa8.82□□□□□ -1
LINC02406-201ENST00000553029 NFIXQ14938 502 aa8.82□□□□□ -1
LINC02406-201ENST00000553029 ZNF467Q7Z7K2 595 aaPredicted RBP8.82□□□□□ -1
LINC02406-201ENST00000553029 COG3Q96JB2 828 aa8.82□□□□□ -1
LINC02406-201ENST00000553029 SPG7Q9UQ90 795 aa8.82□□□□□ -1
LINC02406-201ENST00000553029 CARMIL3Q8ND23 1372 aa8.82□□□□□ -1
LINC02406-201ENST00000553029 SCN4AP35499 1836 aa8.82□□□□□ -1
LINC02406-201ENST00000553029 ADAMTS7Q9UKP4 1686 aa8.81□□□□□ -1
LINC02406-201ENST00000553029 TRAF5O00463 557 aa8.81□□□□□ -1
LINC02406-201ENST00000553029 FBLN1P23142 703 aa8.81□□□□□ -1
LINC02406-201ENST00000553029 IRX5P78411 483 aaPredicted RBP8.81□□□□□ -1
LINC02406-201ENST00000553029 SOGA3Q5TF21 947 aa8.81□□□□□ -1
LINC02406-201ENST00000553029 USPL1Q5W0Q7 1092 aa8.81□□□□□ -1
LINC02406-201ENST00000553029 TMC1Q8TDI8 760 aa8.81□□□□□ -1
LINC02406-201ENST00000553029 SAGE1Q9NXZ1 904 aa8.81□□□□□ -1
LINC02406-201ENST00000553029 PDZRN3Q9UPQ7 1066 aa8.81□□□□□ -1
LINC02406-201ENST00000553029 RRS1Q15050 365 aaKnown RBP8.8□□□□□ -1
LINC02406-201ENST00000553029 BICDL1Q6ZP65 573 aa8.8□□□□□ -1
LINC02406-201ENST00000553029 A0A1W2PP64 1363 aa8.8□□□□□ -1
LINC02406-201ENST00000553029 CASP8AP2Q9UKL3 1982 aa8.8□□□□□ -1
LINC02406-201ENST00000553029 ITGB4P16144 1822 aa8.8□□□□□ -1
LINC02406-201ENST00000553029 CELF2O95319 508 aaKnown RBP8.79□□□□□ -1
LINC02406-201ENST00000553029 PHKG2P15735 406 aa8.79□□□□□ -1
LINC02406-201ENST00000553029 AKAP4Q5JQC9 854 aa8.79□□□□□ -1
LINC02406-201ENST00000553029 IFNL2Q8IZJ0 200 aa8.79□□□□□ -1
LINC02406-201ENST00000553029 TERF2IPQ9NYB0 399 aa8.79□□□□□ -1
LINC02406-201ENST00000553029 DLEC1Q9Y238 1755 aa8.78□□□□□ -1
LINC02406-201ENST00000553029 LMOD1P29536 600 aaPredicted RBP8.78□□□□□ -1
LINC02406-201ENST00000553029 PDE6BP35913 854 aa8.78□□□□□ -1
LINC02406-201ENST00000553029 PKN2Q16513 984 aaKnown RBP8.78□□□□□ -1
LINC02406-201ENST00000553029 GPC2Q8N158 579 aa8.78□□□□□ -1
LINC02406-201ENST00000553029 ZIC5Q96T25 663 aa8.78□□□□□ -1
LINC02406-201ENST00000553029 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.78□□□□□ -1
LINC02406-201ENST00000553029 ZNF831Q5JPB2 1677 aa8.78□□□□□ -1
LINC02406-201ENST00000553029 A0A0C4DFX4 3053 aa8.77□□□□□ -1
LINC02406-201ENST00000553029 RGPD2P0DJD1 1756 aa8.77□□□□□ -1.01
LINC02406-201ENST00000553029 CCDC93Q567U6 631 aa8.77□□□□□ -1.01
LINC02406-201ENST00000553029 HSP90AB2PQ58FF8 381 aa8.77□□□□□ -1.01
LINC02406-201ENST00000553029 PRPF40BQ6NWY9 871 aaKnown RBP8.77□□□□□ -1.01
LINC02406-201ENST00000553029 CNKSR1Q969H4 720 aa8.77□□□□□ -1.01
LINC02406-201ENST00000553029 SLC12A5Q9H2X9 1139 aa8.77□□□□□ -1.01
LINC02406-201ENST00000553029 CIZ1Q9ULV3 898 aaPredicted RBP8.77□□□□□ -1.01
LINC02406-201ENST00000553029 COL5A3P25940 1745 aaPredicted RBP8.77□□□□□ -1.01
LINC02406-201ENST00000553029 FZD9O00144 591 aa8.76□□□□□ -1.01
LINC02406-201ENST00000553029 PTCD1O75127 700 aaKnown RBP8.76□□□□□ -1.01
LINC02406-201ENST00000553029 FKBP4Q02790 459 aaKnown RBP eCLIP8.76□□□□□ -1.01
LINC02406-201ENST00000553029 MAMSTRQ6ZN01 415 aa8.76□□□□□ -1.01
LINC02406-201ENST00000553029 USP50Q70EL3 339 aaPredicted RBP8.76□□□□□ -1.01
LINC02406-201ENST00000553029 BRIP1Q9BX63 1249 aa8.76□□□□□ -1.01
LINC02406-201ENST00000553029 ZNF277Q9NRM2 450 aaPredicted RBP8.76□□□□□ -1.01
LINC02406-201ENST00000553029 NARFQ9UHQ1 456 aa8.76□□□□□ -1.01
LINC02406-201ENST00000553029 SOS1Q07889 1333 aaPredicted RBP8.76□□□□□ -1.01
LINC02406-201ENST00000553029 CUL9Q8IWT3 2517 aa8.76□□□□□ -1.01
LINC02406-201ENST00000553029 MKI67P46013 3256 aaKnown RBP8.76□□□□□ -1.01
LINC02406-201ENST00000553029 FLT4P35916 1363 aa8.75□□□□□ -1.01
LINC02406-201ENST00000553029 SZT2Q5T011 3432 aa8.75□□□□□ -1.01
LINC02406-201ENST00000553029 NRXN2Q9P2S2 1712 aa8.75□□□□□ -1.01
LINC02406-201ENST00000553029 ERVV-2B6SEH9 535 aa8.75□□□□□ -1.01
LINC02406-201ENST00000553029 TRPA1O75762 1119 aa8.75□□□□□ -1.01
LINC02406-201ENST00000553029 INTS5Q6P9B9 1019 aaKnown RBP8.75□□□□□ -1.01
LINC02406-201ENST00000553029 RNF186Q9NXI6 227 aa8.75□□□□□ -1.01
LINC02406-201ENST00000553029 DICER1Q9UPY3 1922 aaKnown RBP8.75□□□□□ -1.01
LINC02406-201ENST00000553029 FER1L6Q2WGJ9 1857 aa8.74□□□□□ -1.01
LINC02406-201ENST00000553029 NCAPD2Q15021 1401 aa8.74□□□□□ -1.01
LINC02406-201ENST00000553029 PSEN1P49768 467 aa8.74□□□□□ -1.01
LINC02406-201ENST00000553029 SCNN1DP51172 638 aa8.74□□□□□ -1.01
LINC02406-201ENST00000553029 STYK1Q6J9G0 422 aa8.74□□□□□ -1.01
LINC02406-201ENST00000553029 ZNF408Q9H9D4 720 aa8.74□□□□□ -1.01
LINC02406-201ENST00000553029 BCL2L12Q9HB09 334 aa8.74□□□□□ -1.01
LINC02406-201ENST00000553029 GJA3Q9Y6H8 435 aa8.74□□□□□ -1.01
LINC02406-201ENST00000553029 CCDC88AQ3V6T2 1871 aa8.74□□□□□ -1.01
LINC02406-201ENST00000553029 COL15A1P39059 1388 aa8.73□□□□□ -1.01
LINC02406-201ENST00000553029 TONSLQ96HA7 1378 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms