RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 LRP10Q7Z4F1 713 aa12.37□□□□□ -0.43
TMEM116-216ENST00000552800 SIRT2Q8IXJ6 389 aa12.37□□□□□ -0.43
TMEM116-216ENST00000552800 ANKRD44Q8N8A2 993 aa12.37□□□□□ -0.43
TMEM116-216ENST00000552800 DCTPP1Q9H773 170 aa12.37□□□□□ -0.43
TMEM116-216ENST00000552800 NRAPQ86VF7 1730 aa12.37□□□□□ -0.43
TMEM116-216ENST00000552800 PAPPAQ13219 1627 aa12.37□□□□□ -0.43
TMEM116-216ENST00000552800 TNS2Q63HR2 1409 aa12.37□□□□□ -0.43
TMEM116-216ENST00000552800 SNRPA1P09661 255 aaKnown RBP12.36□□□□□ -0.43
TMEM116-216ENST00000552800 NUCB1Q02818 461 aa12.36□□□□□ -0.43
TMEM116-216ENST00000552800 MKRN3Q13064 507 aaKnown RBP12.36□□□□□ -0.43
TMEM116-216ENST00000552800 GNAI3P08754 354 aa12.35□□□□□ -0.43
TMEM116-216ENST00000552800 VSIG10Q8N0Z9 540 aa12.35□□□□□ -0.43
TMEM116-216ENST00000552800 FNBP4Q8N3X1 1017 aaPredicted RBP12.35□□□□□ -0.43
TMEM116-216ENST00000552800 FMNL2Q96PY5 1086 aa12.35□□□□□ -0.43
TMEM116-216ENST00000552800 UTYO14607 1347 aa12.35□□□□□ -0.43
TMEM116-216ENST00000552800 GLI3P10071 1580 aa12.35□□□□□ -0.43
TMEM116-216ENST00000552800 ALDH1L1O75891 902 aa12.34□□□□□ -0.43
TMEM116-216ENST00000552800 PDE4AP27815 886 aa12.34□□□□□ -0.43
TMEM116-216ENST00000552800 BEND3Q5T5X7 828 aa12.34□□□□□ -0.43
TMEM116-216ENST00000552800 ZNF496Q96IT1 587 aaPredicted RBP12.34□□□□□ -0.43
TMEM116-216ENST00000552800 PDZRN3Q9UPQ7 1066 aa12.34□□□□□ -0.43
TMEM116-216ENST00000552800 SPATA31A1Q5TZJ5 1347 aa12.34□□□□□ -0.43
TMEM116-216ENST00000552800 JCADQ9P266 1359 aa12.33□□□□□ -0.44
TMEM116-216ENST00000552800 WNK3Q9BYP7 1800 aa12.33□□□□□ -0.44
TMEM116-216ENST00000552800 CABP4P57796 275 aa12.33□□□□□ -0.44
TMEM116-216ENST00000552800 KSR2Q6VAB6 950 aa12.33□□□□□ -0.44
TMEM116-216ENST00000552800 TEX13AQ9BXU3 409 aaPredicted RBP12.33□□□□□ -0.44
TMEM116-216ENST00000552800 USP44Q9H0E7 712 aa12.33□□□□□ -0.44
TMEM116-216ENST00000552800 SPATA31A6Q5VVP1 1343 aa12.33□□□□□ -0.44
TMEM116-216ENST00000552800 COL15A1P39059 1388 aa12.32□□□□□ -0.44
TMEM116-216ENST00000552800 FKBP5Q13451 457 aaPredicted RBP12.32□□□□□ -0.44
TMEM116-216ENST00000552800 CEP85Q6P2H3 762 aa12.32□□□□□ -0.44
TMEM116-216ENST00000552800 PAXIP1Q6ZW49 1069 aaPredicted RBP12.32□□□□□ -0.44
TMEM116-216ENST00000552800 CERKQ8TCT0 537 aa12.32□□□□□ -0.44
TMEM116-216ENST00000552800 CHPF2Q9P2E5 772 aa12.32□□□□□ -0.44
TMEM116-216ENST00000552800 HDAC5Q9UQL6 1122 aa12.32□□□□□ -0.44
TMEM116-216ENST00000552800 SPATA31A5Q5VU36 1347 aa12.32□□□□□ -0.44
TMEM116-216ENST00000552800 SPATA31A7Q8IWB4 1347 aa12.32□□□□□ -0.44
TMEM116-216ENST00000552800 KCPQ6ZWJ8 1503 aa12.32□□□□□ -0.44
TMEM116-216ENST00000552800 ADCY9O60503 1353 aa12.31□□□□□ -0.44
TMEM116-216ENST00000552800 EXOC5O00471 708 aa12.31□□□□□ -0.44
TMEM116-216ENST00000552800 GNAI2P04899 355 aa12.31□□□□□ -0.44
TMEM116-216ENST00000552800 ATP8B2P98198 1209 aa12.31□□□□□ -0.44
TMEM116-216ENST00000552800 MTX1Q13505 466 aa12.31□□□□□ -0.44
TMEM116-216ENST00000552800 FAM161AQ3B820 660 aa12.31□□□□□ -0.44
TMEM116-216ENST00000552800 DNAAF4Q8WXU2 420 aa12.31□□□□□ -0.44
TMEM116-216ENST00000552800 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
TMEM116-216ENST00000552800 PHAXQ9H814 394 aaKnown RBP12.31□□□□□ -0.44
TMEM116-216ENST00000552800 LAMB4A4D0S4 1761 aa12.3□□□□□ -0.44
TMEM116-216ENST00000552800 MEIS3Q99687 375 aa12.3□□□□□ -0.44
TMEM116-216ENST00000552800 STRN4Q9NRL3 753 aa12.3□□□□□ -0.44
TMEM116-216ENST00000552800 C5P01031 1676 aa12.29□□□□□ -0.44
TMEM116-216ENST00000552800 TOGARAM1Q9Y4F4 1720 aa12.29□□□□□ -0.44
TMEM116-216ENST00000552800 PI4KAP2A4QPH2 592 aa12.29□□□□□ -0.44
TMEM116-216ENST00000552800 UBAP1LF5GYI3 381 aa12.29□□□□□ -0.44
TMEM116-216ENST00000552800 F6X3S4 739 aa12.29□□□□□ -0.44
TMEM116-216ENST00000552800 DDX58O95786 925 aaKnown RBP12.29□□□□□ -0.44
TMEM116-216ENST00000552800 EIF2S2P20042 333 aaKnown RBP12.29□□□□□ -0.44
TMEM116-216ENST00000552800 SLC39A6Q13433 755 aa12.29□□□□□ -0.44
TMEM116-216ENST00000552800 VPS72Q15906 364 aa12.29□□□□□ -0.44
TMEM116-216ENST00000552800 C8orf34Q49A92 452 aa12.29□□□□□ -0.44
TMEM116-216ENST00000552800 CHD1LQ86WJ1 897 aa12.29□□□□□ -0.44
TMEM116-216ENST00000552800 UNC5CLQ8IV45 518 aa12.29□□□□□ -0.44
TMEM116-216ENST00000552800 TTC5Q8N0Z6 440 aa12.29□□□□□ -0.44
TMEM116-216ENST00000552800 PI4KAP1Q8N8J0 262 aa12.29□□□□□ -0.44
TMEM116-216ENST00000552800 SPRYD3Q8NCJ5 442 aa12.29□□□□□ -0.44
TMEM116-216ENST00000552800 LINS1Q8NG48 757 aa12.29□□□□□ -0.44
TMEM116-216ENST00000552800 SRCIN1Q9C0H9 1055 aa12.29□□□□□ -0.44
TMEM116-216ENST00000552800 USP16Q9Y5T5 823 aa12.29□□□□□ -0.44
TMEM116-216ENST00000552800 ITGB4P16144 1822 aa12.29□□□□□ -0.44
TMEM116-216ENST00000552800 BCL9O00512 1426 aa12.28□□□□□ -0.44
TMEM116-216ENST00000552800 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.28□□□□□ -0.44
TMEM116-216ENST00000552800 BCL9LQ86UU0 1499 aa12.28□□□□□ -0.44
TMEM116-216ENST00000552800 HMMRO75330 724 aa12.28□□□□□ -0.44
TMEM116-216ENST00000552800 PLCB2Q00722 1185 aa12.28□□□□□ -0.44
TMEM116-216ENST00000552800 SSH3Q8TE77 659 aa12.28□□□□□ -0.44
TMEM116-216ENST00000552800 CICQ96RK0 1608 aaPredicted RBP12.28□□□□□ -0.44
TMEM116-216ENST00000552800 GTPBP6O43824 516 aaPredicted RBP12.27□□□□□ -0.45
TMEM116-216ENST00000552800 ONECUT3O60422 494 aaPredicted RBP12.27□□□□□ -0.45
TMEM116-216ENST00000552800 OSBPL3Q9H4L5 887 aa12.27□□□□□ -0.45
TMEM116-216ENST00000552800 ZNF831Q5JPB2 1677 aa12.26□□□□□ -0.45
TMEM116-216ENST00000552800 PRAMEF22A3QJZ6 481 aa12.26□□□□□ -0.45
TMEM116-216ENST00000552800 PROSER3Q2NL68 480 aa12.26□□□□□ -0.45
TMEM116-216ENST00000552800 ANKRD13DQ6ZTN6 518 aa12.26□□□□□ -0.45
TMEM116-216ENST00000552800 PIGBQ92521 554 aa12.26□□□□□ -0.45
TMEM116-216ENST00000552800 METTL22Q9BUU2 404 aaPredicted RBP12.26□□□□□ -0.45
TMEM116-216ENST00000552800 NOP58Q9Y2X3 529 aaKnown RBP12.26□□□□□ -0.45
TMEM116-216ENST00000552800 SNPHO15079 494 aa12.25□□□□□ -0.45
TMEM116-216ENST00000552800 TRIM28Q13263 835 aaKnown RBP12.25□□□□□ -0.45
TMEM116-216ENST00000552800 FBXO22Q8NEZ5 403 aa12.25□□□□□ -0.45
TMEM116-216ENST00000552800 DDX54Q8TDD1 881 aaKnown RBP12.25□□□□□ -0.45
TMEM116-216ENST00000552800 ATG3Q9NT62 314 aa12.25□□□□□ -0.45
TMEM116-216ENST00000552800 NBPF26B4DH59 902 aa12.24□□□□□ -0.45
TMEM116-216ENST00000552800 BMP2KLQ5H9B9 411 aa12.24□□□□□ -0.45
TMEM116-216ENST00000552800 NBPF14Q5TI25 921 aa12.24□□□□□ -0.45
TMEM116-216ENST00000552800 NBPF10Q6P3W6 841 aaKnown RBP12.24□□□□□ -0.45
TMEM116-216ENST00000552800 SLC4A10Q6U841 1118 aa12.24□□□□□ -0.45
TMEM116-216ENST00000552800 NBPF15Q8N660 670 aa12.24□□□□□ -0.45
TMEM116-216ENST00000552800 PLBD2Q8NHP8 589 aa12.24□□□□□ -0.45
TMEM116-216ENST00000552800 TMOD3Q9NYL9 352 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms