RNA–Protein interactions for RNA: ENST00000552656.5

RNF41-211, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-211ENST00000552656 KIF7Q2M1P5 1343 aa14.26□□□□□ -0.13
RNF41-211ENST00000552656 PRAMEF22A3QJZ6 481 aa14.26□□□□□ -0.13
RNF41-211ENST00000552656 STYK1Q6J9G0 422 aa14.26□□□□□ -0.13
RNF41-211ENST00000552656 OLFM4Q6UX06 510 aa14.26□□□□□ -0.13
RNF41-211ENST00000552656 CNBD1Q8NA66 436 aa14.26□□□□□ -0.13
RNF41-211ENST00000552656 CEMIPQ8WUJ3 1361 aa14.25□□□□□ -0.13
RNF41-211ENST00000552656 ITGBL1O95965 494 aaPredicted RBP14.25□□□□□ -0.13
RNF41-211ENST00000552656 CC2D1BQ5T0F9 858 aaKnown RBP14.25□□□□□ -0.13
RNF41-211ENST00000552656 CNKSR1Q969H4 720 aa14.25□□□□□ -0.13
RNF41-211ENST00000552656 SETDB2Q96T68 719 aa14.25□□□□□ -0.13
RNF41-211ENST00000552656 TAF1DQ9H5J8 278 aaPredicted RBP14.25□□□□□ -0.13
RNF41-211ENST00000552656 USP16Q9Y5T5 823 aa14.25□□□□□ -0.13
RNF41-211ENST00000552656 ZNF541Q9H0D2 1346 aa14.24□□□□□ -0.13
RNF41-211ENST00000552656 GNAT3A8MTJ3 354 aa14.24□□□□□ -0.13
RNF41-211ENST00000552656 TEFQ10587 303 aa14.24□□□□□ -0.13
RNF41-211ENST00000552656 MASTLQ96GX5 879 aa14.24□□□□□ -0.13
RNF41-211ENST00000552656 L3MBTL3Q96JM7 780 aaPredicted RBP14.24□□□□□ -0.13
RNF41-211ENST00000552656 TEX13AQ9BXU3 409 aaPredicted RBP14.24□□□□□ -0.13
RNF41-211ENST00000552656 VEGFBP49765 207 aa14.23□□□□□ -0.13
RNF41-211ENST00000552656 LDHDQ86WU2 507 aa14.23□□□□□ -0.13
RNF41-211ENST00000552656 DZIP3Q86Y13 1208 aaKnown RBP14.23□□□□□ -0.13
RNF41-211ENST00000552656 FMNL2Q96PY5 1086 aa14.23□□□□□ -0.13
RNF41-211ENST00000552656 ST5P78524 1137 aa14.22□□□□□ -0.13
RNF41-211ENST00000552656 PHACTR3Q96KR7 559 aa14.22□□□□□ -0.13
RNF41-211ENST00000552656 ZNF277Q9NRM2 450 aaPredicted RBP14.22□□□□□ -0.13
RNF41-211ENST00000552656 COL4A5P29400 1685 aa14.21□□□□□ -0.13
RNF41-211ENST00000552656 U2SURPO15042 1029 aaKnown RBP14.21□□□□□ -0.13
RNF41-211ENST00000552656 GAS2L2Q8NHY3 880 aa14.21□□□□□ -0.13
RNF41-211ENST00000552656 PRDM10Q9NQV6 1147 aa14.21□□□□□ -0.13
RNF41-211ENST00000552656 SNED1Q8TER0 1413 aa14.21□□□□□ -0.13
RNF41-211ENST00000552656 LTBP1Q14766 1721 aa14.21□□□□□ -0.14
RNF41-211ENST00000552656 KLRG2A4D1S0 409 aaPredicted RBP14.2□□□□□ -0.14
RNF41-211ENST00000552656 IQCA1LA6NCM1 817 aa14.2□□□□□ -0.14
RNF41-211ENST00000552656 FKBP4Q02790 459 aaKnown RBP eCLIP14.2□□□□□ -0.14
RNF41-211ENST00000552656 CCDC93Q567U6 631 aa14.2□□□□□ -0.14
RNF41-211ENST00000552656 SOGA3Q5TF21 947 aa14.2□□□□□ -0.14
RNF41-211ENST00000552656 WBP1LQ9NX94 342 aa14.2□□□□□ -0.14
RNF41-211ENST00000552656 TMEM88BA6NKF7 163 aa14.19□□□□□ -0.14
RNF41-211ENST00000552656 BTBD11A6QL63 1104 aa14.19□□□□□ -0.14
RNF41-211ENST00000552656 NBPF26B4DH59 902 aa14.19□□□□□ -0.14
RNF41-211ENST00000552656 NPHP1O15259 732 aa14.19□□□□□ -0.14
RNF41-211ENST00000552656 CNGB1Q14028 1251 aaPredicted RBP14.19□□□□□ -0.14
RNF41-211ENST00000552656 EAPPQ56P03 285 aaPredicted RBP14.19□□□□□ -0.14
RNF41-211ENST00000552656 NBPF10Q6P3W6 841 aaKnown RBP14.19□□□□□ -0.14
RNF41-211ENST00000552656 SLC51AQ86UW1 340 aa14.19□□□□□ -0.14
RNF41-211ENST00000552656 NBPF15Q8N660 670 aa14.19□□□□□ -0.14
RNF41-211ENST00000552656 RNF123Q5XPI4 1314 aa14.18□□□□□ -0.14
RNF41-211ENST00000552656 NPR1P16066 1061 aa14.18□□□□□ -0.14
RNF41-211ENST00000552656 LBX1P52954 281 aa14.18□□□□□ -0.14
RNF41-211ENST00000552656 MAP1SQ66K74 1059 aaPredicted RBP14.18□□□□□ -0.14
RNF41-211ENST00000552656 CLEC4GQ6UXB4 293 aa14.18□□□□□ -0.14
RNF41-211ENST00000552656 NBPF5PQ86XG9 351 aaPredicted RBP14.18□□□□□ -0.14
RNF41-211ENST00000552656 FAM177BA6PVY3 158 aa14.17□□□□□ -0.14
RNF41-211ENST00000552656 FZD9O00144 591 aa14.17□□□□□ -0.14
RNF41-211ENST00000552656 EPHX2P34913 555 aa14.17□□□□□ -0.14
RNF41-211ENST00000552656 CTCFP49711 727 aaPredicted RBP14.17□□□□□ -0.14
RNF41-211ENST00000552656 FMR1Q06787 632 aaKnown RBP eCLIP14.17□□□□□ -0.14
RNF41-211ENST00000552656 HLFQ16534 295 aa14.17□□□□□ -0.14
RNF41-211ENST00000552656 RSPH6AQ9H0K4 717 aa14.17□□□□□ -0.14
RNF41-211ENST00000552656 HACL1Q9UJ83 578 aa14.17□□□□□ -0.14
RNF41-211ENST00000552656 NUP98P52948 1817 aa14.16□□□□□ -0.14
RNF41-211ENST00000552656 RASSF10A6NK89 507 aa14.16□□□□□ -0.14
RNF41-211ENST00000552656 HSPA8P11142 646 aaKnown RBP14.16□□□□□ -0.14
RNF41-211ENST00000552656 PRKAR2BP31323 418 aa14.16□□□□□ -0.14
RNF41-211ENST00000552656 NIP7Q9Y221 180 aaKnown RBP eCLIP14.16□□□□□ -0.14
RNF41-211ENST00000552656 CLEC11AQ9Y240 323 aa14.16□□□□□ -0.14
RNF41-211ENST00000552656 ABCC12Q96J65 1359 aa14.15□□□□□ -0.14
RNF41-211ENST00000552656 NPC1L1Q9UHC9 1359 aa14.15□□□□□ -0.14
RNF41-211ENST00000552656 IARSP41252 1262 aaKnown RBP14.15□□□□□ -0.14
RNF41-211ENST00000552656 DCTN1Q14203 1278 aa14.15□□□□□ -0.14
RNF41-211ENST00000552656 MCM10Q7L590 875 aa14.15□□□□□ -0.14
RNF41-211ENST00000552656 NPM2Q86SE8 214 aaKnown RBP14.15□□□□□ -0.14
RNF41-211ENST00000552656 CNTROBQ8N137 903 aa14.15□□□□□ -0.14
RNF41-211ENST00000552656 SYNE4Q8N205 404 aa14.15□□□□□ -0.14
RNF41-211ENST00000552656 THSD7BQ9C0I4 1608 aa14.15□□□□□ -0.14
RNF41-211ENST00000552656 LAMB4A4D0S4 1761 aa14.14□□□□□ -0.15
RNF41-211ENST00000552656 SNRPA1P09661 255 aaKnown RBP14.14□□□□□ -0.15
RNF41-211ENST00000552656 DEFB115Q30KQ5 88 aa14.14□□□□□ -0.15
RNF41-211ENST00000552656 TRPM7Q96QT4 1865 aa14.13□□□□□ -0.15
RNF41-211ENST00000552656 TPTE2Q6XPS3 522 aa14.13□□□□□ -0.15
RNF41-211ENST00000552656 RTKN2Q8IZC4 609 aa14.13□□□□□ -0.15
RNF41-211ENST00000552656 AIDAQ96BJ3 306 aa14.13□□□□□ -0.15
RNF41-211ENST00000552656 WDR33Q9C0J8 1336 aaKnown RBP14.13□□□□□ -0.15
RNF41-211ENST00000552656 DLG5Q8TDM6 1919 aa14.12□□□□□ -0.15
RNF41-211ENST00000552656 PNMA8AQ86V59 439 aaPredicted RBP14.12□□□□□ -0.15
RNF41-211ENST00000552656 NUTM1Q86Y26 1132 aa14.12□□□□□ -0.15
RNF41-211ENST00000552656 GPC2Q8N158 579 aa14.12□□□□□ -0.15
RNF41-211ENST00000552656 ABHD8Q96I13 439 aa14.12□□□□□ -0.15
RNF41-211ENST00000552656 ZNF652Q9Y2D9 606 aa14.12□□□□□ -0.15
RNF41-211ENST00000552656 SCNN1DP51172 638 aa14.11□□□□□ -0.15
RNF41-211ENST00000552656 CRY2Q49AN0 593 aa14.11□□□□□ -0.15
RNF41-211ENST00000552656 DDX21Q9NR30 783 aaKnown RBP eCLIP14.11□□□□□ -0.15
RNF41-211ENST00000552656 KDM3BQ7LBC6 1761 aa14.11□□□□□ -0.15
RNF41-211ENST00000552656 RGL2O15211 777 aa14.1□□□□□ -0.15
RNF41-211ENST00000552656 ALDH1B1P30837 517 aa14.1□□□□□ -0.15
RNF41-211ENST00000552656 EPS15P42566 896 aa14.1□□□□□ -0.15
RNF41-211ENST00000552656 PSMD1Q99460 953 aa14.1□□□□□ -0.15
RNF41-211ENST00000552656 MIS18AQ9NYP9 233 aa14.1□□□□□ -0.15
RNF41-211ENST00000552656 ABT1Q9ULW3 272 aaKnown RBP14.1□□□□□ -0.15
RNF41-211ENST00000552656 GJA3Q9Y6H8 435 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms