RNA–Protein interactions for RNA: ENST00000552442.1

UBE2N-206, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 5 BASIC

Gene UBE2N, Length 607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-206ENST00000552442 FAM163AQ96GL9 167 aaPredicted RBP12.13□□□□□ -0.47
UBE2N-206ENST00000552442 AK7Q96M32 723 aa12.13□□□□□ -0.47
UBE2N-206ENST00000552442 DLG5Q8TDM6 1919 aa12.13□□□□□ -0.47
UBE2N-206ENST00000552442 UBR2Q8IWV8 1755 aa12.13□□□□□ -0.47
UBE2N-206ENST00000552442 ST18O60284 1047 aa12.12□□□□□ -0.47
UBE2N-206ENST00000552442 ATP6V1AP38606 617 aa12.12□□□□□ -0.47
UBE2N-206ENST00000552442 MTHFSDQ2M296 383 aaKnown RBP12.12□□□□□ -0.47
UBE2N-206ENST00000552442 NUDCQ9Y266 331 aa12.12□□□□□ -0.47
UBE2N-206ENST00000552442 COL23A1Q86Y22 540 aaPredicted RBP12.11□□□□□ -0.47
UBE2N-206ENST00000552442 LINC00116Q8NCU8 138 aa12.11□□□□□ -0.47
UBE2N-206ENST00000552442 FLAD1Q8NFF5 587 aa12.11□□□□□ -0.47
UBE2N-206ENST00000552442 C4AP0C0L4 1744 aa12.11□□□□□ -0.47
UBE2N-206ENST00000552442 SPDYE16A6NNV3 312 aaPredicted RBP12.1□□□□□ -0.47
UBE2N-206ENST00000552442 POLD1P28340 1107 aa12.1□□□□□ -0.47
UBE2N-206ENST00000552442 ITPK1Q13572 414 aa12.1□□□□□ -0.47
UBE2N-206ENST00000552442 PDIA6Q15084 440 aa12.1□□□□□ -0.47
UBE2N-206ENST00000552442 NFATC2IPQ8NCF5 419 aa12.1□□□□□ -0.47
UBE2N-206ENST00000552442 MAP3K5Q99683 1374 aa12.09□□□□□ -0.47
UBE2N-206ENST00000552442 RNMTO43148 476 aaKnown RBP12.09□□□□□ -0.47
UBE2N-206ENST00000552442 EVI5O60447 810 aa12.09□□□□□ -0.47
UBE2N-206ENST00000552442 NUDT7P0C024 238 aa12.09□□□□□ -0.47
UBE2N-206ENST00000552442 U2AF1L5P0DN76 240 aaPredicted RBP12.09□□□□□ -0.47
UBE2N-206ENST00000552442 PRKAR2BP31323 418 aa12.09□□□□□ -0.47
UBE2N-206ENST00000552442 U2AF1Q01081 240 aaKnown RBP eCLIP12.09□□□□□ -0.47
UBE2N-206ENST00000552442 DDX10Q13206 875 aaKnown RBP12.09□□□□□ -0.47
UBE2N-206ENST00000552442 GAS2L2Q8NHY3 880 aa12.09□□□□□ -0.47
UBE2N-206ENST00000552442 ARXQ96QS3 562 aa12.09□□□□□ -0.47
UBE2N-206ENST00000552442 RSPH6AQ9H0K4 717 aa12.09□□□□□ -0.47
UBE2N-206ENST00000552442 SLC52A2Q9HAB3 445 aa12.09□□□□□ -0.47
UBE2N-206ENST00000552442 LGR6Q9HBX8 967 aa12.09□□□□□ -0.47
UBE2N-206ENST00000552442 PHF14O94880 888 aa12.08□□□□□ -0.48
UBE2N-206ENST00000552442 ZEB1P37275 1124 aaPredicted RBP12.08□□□□□ -0.48
UBE2N-206ENST00000552442 KHSRPQ92945 711 aaKnown RBP eCLIP12.08□□□□□ -0.487e-7■□□□□ 11.2
UBE2N-206ENST00000552442 SLC4A9Q96Q91 983 aa12.08□□□□□ -0.48
UBE2N-206ENST00000552442 FHDC1Q9C0D6 1143 aaPredicted RBP12.08□□□□□ -0.48
UBE2N-206ENST00000552442 CHD4Q14839 1912 aa12.07□□□□□ -0.48
UBE2N-206ENST00000552442 KCPQ6ZWJ8 1503 aa12.07□□□□□ -0.48
UBE2N-206ENST00000552442 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.07□□□□□ -0.48
UBE2N-206ENST00000552442 GNAT3A8MTJ3 354 aa12.07□□□□□ -0.48
UBE2N-206ENST00000552442 GNPATO15228 680 aa12.07□□□□□ -0.48
UBE2N-206ENST00000552442 PTCD1O75127 700 aaKnown RBP12.07□□□□□ -0.48
UBE2N-206ENST00000552442 SSFA2P28290 1259 aa12.07□□□□□ -0.48
UBE2N-206ENST00000552442 MSL1Q68DK7 614 aa12.07□□□□□ -0.48
UBE2N-206ENST00000552442 AMIGO3Q86WK7 504 aa12.07□□□□□ -0.48
UBE2N-206ENST00000552442 PHACTR3Q96KR7 559 aa12.06□□□□□ -0.48
UBE2N-206ENST00000552442 CNTNAP4Q9C0A0 1308 aa12.06□□□□□ -0.48
UBE2N-206ENST00000552442 FCHSD2O94868 740 aa12.05□□□□□ -0.48
UBE2N-206ENST00000552442 NBR1Q14596 966 aa12.05□□□□□ -0.48
UBE2N-206ENST00000552442 RALBP1Q15311 655 aa12.05□□□□□ -0.48
UBE2N-206ENST00000552442 SMIM5Q71RC9 77 aa12.05□□□□□ -0.48
UBE2N-206ENST00000552442 SYT17Q9BSW7 474 aa12.05□□□□□ -0.48
UBE2N-206ENST00000552442 EMP3P54852 163 aa12.04□□□□□ -0.48
UBE2N-206ENST00000552442 TEFQ10587 303 aa12.04□□□□□ -0.48
UBE2N-206ENST00000552442 SLC39A6Q13433 755 aa12.04□□□□□ -0.48
UBE2N-206ENST00000552442 RC3H1Q5TC82 1133 aaKnown RBP12.04□□□□□ -0.48
UBE2N-206ENST00000552442 RTCBQ9Y3I0 505 aaKnown RBP12.04□□□□□ -0.48
UBE2N-206ENST00000552442 IL17REQ8NFR9 667 aa12.03□□□□□ -0.48
UBE2N-206ENST00000552442 CEMIPQ8WUJ3 1361 aa12.03□□□□□ -0.48
UBE2N-206ENST00000552442 KIF13BQ9NQT8 1826 aa12.02□□□□□ -0.48
UBE2N-206ENST00000552442 RPS6KA4O75676 772 aa12.02□□□□□ -0.49
UBE2N-206ENST00000552442 NEFMP07197 916 aa12.02□□□□□ -0.49
UBE2N-206ENST00000552442 CRKLP46109 303 aaKnown RBP12.02□□□□□ -0.49
UBE2N-206ENST00000552442 TRAPPC3LQ5T215 181 aa12.02□□□□□ -0.49
UBE2N-206ENST00000552442 LCE2DQ5TA82 110 aaPredicted RBP12.02□□□□□ -0.49
UBE2N-206ENST00000552442 DNAJC10Q8IXB1 793 aa12.02□□□□□ -0.49
UBE2N-206ENST00000552442 TTC5Q8N0Z6 440 aa12.02□□□□□ -0.49
UBE2N-206ENST00000552442 MYBBP1AQ9BQG0 1328 aaKnown RBP12.02□□□□□ -0.49
UBE2N-206ENST00000552442 KDM3BQ7LBC6 1761 aa12.01□□□□□ -0.49
UBE2N-206ENST00000552442 RTF1Q92541 710 aaKnown RBP12.01□□□□□ -0.49
UBE2N-206ENST00000552442 LAMB4A4D0S4 1761 aa12□□□□□ -0.49
UBE2N-206ENST00000552442 MARVELD3Q96A59 401 aa12□□□□□ -0.49
UBE2N-206ENST00000552442 RFC4P35249 363 aa11.99□□□□□ -0.49
UBE2N-206ENST00000552442 INTS5Q6P9B9 1019 aaKnown RBP11.99□□□□□ -0.49
UBE2N-206ENST00000552442 ZNF790Q6PG37 636 aa11.99□□□□□ -0.49
UBE2N-206ENST00000552442 PNNQ9H307 717 aaKnown RBP11.99□□□□□ -0.49
UBE2N-206ENST00000552442 CCDC87Q9NVE4 849 aa11.99□□□□□ -0.49
UBE2N-206ENST00000552442 LHX6Q9UPM6 363 aa11.99□□□□□ -0.49
UBE2N-206ENST00000552442 MAPK8IP3Q9UPT6 1336 aa11.99□□□□□ -0.49
UBE2N-206ENST00000552442 HEG1Q9ULI3 1381 aa11.99□□□□□ -0.49
UBE2N-206ENST00000552442 N4BP2Q86UW6 1770 aaPredicted RBP11.99□□□□□ -0.49
UBE2N-206ENST00000552442 AFDNP55196 1824 aaKnown RBP11.99□□□□□ -0.49
UBE2N-206ENST00000552442 KIAA1551Q9HCM1 1747 aa11.98□□□□□ -0.49
UBE2N-206ENST00000552442 HTATSF1O43719 755 aaKnown RBP11.98□□□□□ -0.49
UBE2N-206ENST00000552442 CYP19A1P11511 503 aaPredicted RBP11.98□□□□□ -0.49
UBE2N-206ENST00000552442 MCM10Q7L590 875 aa11.98□□□□□ -0.49
UBE2N-206ENST00000552442 NLGN2Q8NFZ4 835 aa11.98□□□□□ -0.49
UBE2N-206ENST00000552442 ZNF496Q96IT1 587 aaPredicted RBP11.98□□□□□ -0.49
UBE2N-206ENST00000552442 SCN7AQ01118 1682 aa11.97□□□□□ -0.49
UBE2N-206ENST00000552442 SOS1Q07889 1333 aaPredicted RBP11.97□□□□□ -0.49
UBE2N-206ENST00000552442 BTBD11A6QL63 1104 aa11.97□□□□□ -0.49
UBE2N-206ENST00000552442 MMP10P09238 476 aa11.97□□□□□ -0.49
UBE2N-206ENST00000552442 DCTN1Q14203 1278 aa11.97□□□□□ -0.49
UBE2N-206ENST00000552442 NFE2L2Q16236 605 aa11.97□□□□□ -0.49
UBE2N-206ENST00000552442 NLGN1Q8N2Q7 840 aa11.97□□□□□ -0.49
UBE2N-206ENST00000552442 FMNL2Q96PY5 1086 aa11.97□□□□□ -0.49
UBE2N-206ENST00000552442 PLEKHF1Q96S99 279 aa11.97□□□□□ -0.49
UBE2N-206ENST00000552442 CD2APQ9Y5K6 639 aa11.97□□□□□ -0.49
UBE2N-206ENST00000552442 BRCA1P38398 1863 aaKnown RBP11.97□□□□□ -0.49
UBE2N-206ENST00000552442 COL15A1P39059 1388 aa11.96□□□□□ -0.49
UBE2N-206ENST00000552442 USP42Q9H9J4 1324 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms