RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	NBPF1	Q3BBV0	1214 aa		9.5	□□□□□ -0.89
CNOT2-238	ENST00000552422	FAM174A	Q8TBP5	190 aa		9.5	□□□□□ -0.89
CNOT2-238	ENST00000552422	SLAIN2	Q9P270	581 aa		9.5	□□□□□ -0.89
CNOT2-238	ENST00000552422	ROCK2	O75116	1388 aa	Known RBP	9.5	□□□□□ -0.89
CNOT2-238	ENST00000552422	SHPRH	Q149N8	1683 aa		9.49	□□□□□ -0.89
CNOT2-238	ENST00000552422	C1orf167	Q5SNV9	1468 aa		9.49	□□□□□ -0.89
CNOT2-238	ENST00000552422	NBPF8	Q3BBV2	869 aa		9.49	□□□□□ -0.89
CNOT2-238	ENST00000552422	NBPF14	Q5TI25	921 aa		9.49	□□□□□ -0.89
CNOT2-238	ENST00000552422	CCER1	Q8TC90	406 aa	Predicted RBP	9.49	□□□□□ -0.89
CNOT2-238	ENST00000552422	PRAM1	Q96QH2	718 aa		9.49	□□□□□ -0.89
CNOT2-238	ENST00000552422	TRAK1	Q9UPV9	953 aa		9.49	□□□□□ -0.89
CNOT2-238	ENST00000552422	TULP4	Q9NRJ4	1543 aa		9.48	□□□□□ -0.89
CNOT2-238	ENST00000552422	PPP2R2D	Q66LE6	453 aa		9.48	□□□□□ -0.89
CNOT2-238	ENST00000552422	BPHL	Q86WA6	291 aa	Predicted RBP	9.48	□□□□□ -0.89
CNOT2-238	ENST00000552422	IL27	Q8NEV9	243 aa		9.48	□□□□□ -0.89
CNOT2-238	ENST00000552422	TIMELESS	Q9UNS1	1208 aa		9.48	□□□□□ -0.89
CNOT2-238	ENST00000552422	AP1G2	O75843	785 aa		9.47	□□□□□ -0.89
CNOT2-238	ENST00000552422	HSPA1L	P34931	641 aa		9.47	□□□□□ -0.89
CNOT2-238	ENST00000552422	BRPF1	P55201	1214 aa	Predicted RBP	9.47	□□□□□ -0.89
CNOT2-238	ENST00000552422	LRRN4	Q8WUT4	740 aa		9.47	□□□□□ -0.89
CNOT2-238	ENST00000552422	GMPR2	Q9P2T1	348 aa	Known RBP	9.47	□□□□□ -0.89
CNOT2-238	ENST00000552422	SAFB2	Q14151	953 aa	Known RBP eCLIP	9.46	□□□□□ -0.9
CNOT2-238	ENST00000552422	ARID5B	Q14865	1188 aa		9.46	□□□□□ -0.9
CNOT2-238	ENST00000552422	BRINP3	Q76B58	766 aa		9.46	□□□□□ -0.9
CNOT2-238	ENST00000552422	PCMTD1	Q96MG8	357 aa	Predicted RBP	9.46	□□□□□ -0.9
CNOT2-238	ENST00000552422	ATP13A2	Q9NQ11	1180 aa		9.46	□□□□□ -0.9
CNOT2-238	ENST00000552422	POGK	Q9P215	609 aa		9.46	□□□□□ -0.9
CNOT2-238	ENST00000552422	EIF3A	Q14152	1382 aa	Known RBP	9.46	□□□□□ -0.9
CNOT2-238	ENST00000552422	ANKAR	Q7Z5J8	1434 aa		9.46	□□□□□ -0.9
CNOT2-238	ENST00000552422	ATP7B	P35670	1465 aa		9.46	□□□□□ -0.9
CNOT2-238	ENST00000552422	C4orf48	Q5BLP8	95 aa		9.45	□□□□□ -0.9
CNOT2-238	ENST00000552422	MPND	Q8N594	471 aa		9.45	□□□□□ -0.9
CNOT2-238	ENST00000552422	GOPC	Q9HD26	462 aa		9.45	□□□□□ -0.9
CNOT2-238	ENST00000552422	TRPM3	Q9HCF6	1732 aa	Predicted RBP	9.45	□□□□□ -0.9
CNOT2-238	ENST00000552422	C11orf95	C9JLR9	678 aa	Predicted RBP	9.44	□□□□□ -0.9
CNOT2-238	ENST00000552422	NNT	Q13423	1086 aa		9.44	□□□□□ -0.9
CNOT2-238	ENST00000552422	ZNF775	Q96BV0	537 aa	Predicted RBP	9.44	□□□□□ -0.9
CNOT2-238	ENST00000552422	CENPJ	Q9HC77	1338 aa	Predicted RBP	9.44	□□□□□ -0.9
CNOT2-238	ENST00000552422	MARF1	Q9Y4F3	1742 aa	Known RBP	9.44	□□□□□ -0.9
CNOT2-238	ENST00000552422	AKAP12	Q02952	1782 aa		9.44	□□□□□ -0.9
CNOT2-238	ENST00000552422	ABCA3	Q99758	1704 aa		9.43	□□□□□ -0.9
CNOT2-238	ENST00000552422	COL22A1	Q8NFW1	1626 aa	Predicted RBP	9.43	□□□□□ -0.9
CNOT2-238	ENST00000552422	MED1	Q15648	1581 aa	Predicted RBP	9.43	□□□□□ -0.9
CNOT2-238	ENST00000552422	PXDN	Q92626	1479 aa		9.43	□□□□□ -0.9
CNOT2-238	ENST00000552422	SBNO2	Q9Y2G9	1366 aa		9.43	□□□□□ -0.9
CNOT2-238	ENST00000552422	MAGEB6P1	A0A0J9YX57	407 aa		9.43	□□□□□ -0.9
CNOT2-238	ENST00000552422	CAPN5	O15484	640 aa	Predicted RBP	9.43	□□□□□ -0.9
CNOT2-238	ENST00000552422	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	9.43	□□□□□ -0.9	6e-6	■■□□□ 12
CNOT2-238	ENST00000552422	HIRIP3	Q9BW71	556 aa	Predicted RBP	9.43	□□□□□ -0.9
CNOT2-238	ENST00000552422	ALS2	Q96Q42	1657 aa		9.42	□□□□□ -0.9
CNOT2-238	ENST00000552422	WASL	O00401	505 aa	Predicted RBP	9.42	□□□□□ -0.9
CNOT2-238	ENST00000552422	ADH1C	P00326	375 aa		9.42	□□□□□ -0.9
CNOT2-238	ENST00000552422	RFC5	P40937	340 aa		9.42	□□□□□ -0.9
CNOT2-238	ENST00000552422	NR6A1	Q15406	480 aa		9.42	□□□□□ -0.9
CNOT2-238	ENST00000552422	SH3BP5L	Q7L8J4	393 aa		9.42	□□□□□ -0.9
CNOT2-238	ENST00000552422	ORAI2	Q96SN7	254 aa		9.42	□□□□□ -0.9
CNOT2-238	ENST00000552422	CARD14	Q9BXL6	1004 aa		9.42	□□□□□ -0.9
CNOT2-238	ENST00000552422	CARD11	Q9BXL7	1154 aa		9.42	□□□□□ -0.9
CNOT2-238	ENST00000552422	PRR36	Q9H6K5	1346 aa		9.41	□□□□□ -0.9
CNOT2-238	ENST00000552422	USP17L8	P0C7I0	530 aa		9.41	□□□□□ -0.9
CNOT2-238	ENST00000552422	SH3RF1	Q7Z6J0	888 aa		9.41	□□□□□ -0.9
CNOT2-238	ENST00000552422	CDK15	Q96Q40	435 aa		9.41	□□□□□ -0.9
CNOT2-238	ENST00000552422	SENP2	Q9HC62	589 aa		9.41	□□□□□ -0.9
CNOT2-238	ENST00000552422	FKBPL	Q9UIM3	349 aa		9.41	□□□□□ -0.9
CNOT2-238	ENST00000552422	CRYBG1	Q9Y4K1	1723 aa		9.41	□□□□□ -0.9
CNOT2-238	ENST00000552422	MON2	Q7Z3U7	1717 aa		9.4	□□□□□ -0.9
CNOT2-238	ENST00000552422	ESCO1	Q5FWF5	840 aa		9.4	□□□□□ -0.9
CNOT2-238	ENST00000552422	USP47	Q96K76	1375 aa		9.39	□□□□□ -0.91
CNOT2-238	ENST00000552422	JCAD	Q9P266	1359 aa		9.39	□□□□□ -0.91
CNOT2-238	ENST00000552422	SOS2	Q07890	1332 aa	Predicted RBP	9.39	□□□□□ -0.91
CNOT2-238	ENST00000552422	NPHP3	Q7Z494	1330 aa		9.39	□□□□□ -0.91
CNOT2-238	ENST00000552422	WDR4	P57081	412 aa	Known RBP	9.39	□□□□□ -0.91
CNOT2-238	ENST00000552422	DDX17	Q92841	729 aa	Known RBP	9.39	□□□□□ -0.91
CNOT2-238	ENST00000552422	C1QTNF2	Q9BXJ5	285 aa		9.39	□□□□□ -0.91
CNOT2-238	ENST00000552422	MYOM1	P52179	1685 aa		9.39	□□□□□ -0.91
CNOT2-238	ENST00000552422	NRK	Q7Z2Y5	1582 aa		9.38	□□□□□ -0.91
CNOT2-238	ENST00000552422	BMP1	P13497	986 aa		9.38	□□□□□ -0.91
CNOT2-238	ENST00000552422	PDXDC2P	Q6P474	469 aa		9.38	□□□□□ -0.91
CNOT2-238	ENST00000552422	KIFC2	Q96AC6	838 aa		9.38	□□□□□ -0.91
CNOT2-238	ENST00000552422	TRIM47	Q96LD4	638 aa		9.38	□□□□□ -0.91
CNOT2-238	ENST00000552422	ARHGAP9	Q9BRR9	750 aa		9.38	□□□□□ -0.91
CNOT2-238	ENST00000552422	CDK19	Q9BWU1	502 aa		9.38	□□□□□ -0.91
CNOT2-238	ENST00000552422	ZC3H4	Q9UPT8	1303 aa	Known RBP	9.37	□□□□□ -0.91
CNOT2-238	ENST00000552422	NR5A1	Q13285	461 aa		9.37	□□□□□ -0.91
CNOT2-238	ENST00000552422	TMEM259	Q4ZIN3	620 aa		9.37	□□□□□ -0.91
CNOT2-238	ENST00000552422	VASH1	Q7L8A9	365 aa	Predicted RBP	9.37	□□□□□ -0.91
CNOT2-238	ENST00000552422	PNMA1	Q8ND90	353 aa		9.37	□□□□□ -0.91
CNOT2-238	ENST00000552422	EPS8L1	Q8TE68	723 aa		9.37	□□□□□ -0.91
CNOT2-238	ENST00000552422	HMX1	Q9NP08	348 aa	Predicted RBP	9.37	□□□□□ -0.91
CNOT2-238	ENST00000552422	LRP6	O75581	1613 aa		9.37	□□□□□ -0.91
CNOT2-238	ENST00000552422	POLR3A	O14802	1390 aa	Predicted RBP	9.37	□□□□□ -0.91
CNOT2-238	ENST00000552422	PNPLA6	Q8IY17	1366 aa		9.37	□□□□□ -0.91
CNOT2-238	ENST00000552422	EVC2	Q86UK5	1308 aa		9.36	□□□□□ -0.91
CNOT2-238	ENST00000552422	PHRF1	Q9P1Y6	1649 aa	Known RBP	9.36	□□□□□ -0.91
CNOT2-238	ENST00000552422	FOXO3	O43524	673 aa		9.36	□□□□□ -0.91
CNOT2-238	ENST00000552422	SNRPB	P14678	240 aa	Known RBP	9.36	□□□□□ -0.91
CNOT2-238	ENST00000552422	TIMP2	P16035	220 aa		9.36	□□□□□ -0.91
CNOT2-238	ENST00000552422	FSHR	P23945	695 aa		9.36	□□□□□ -0.91
CNOT2-238	ENST00000552422	TRMT44	Q8IYL2	757 aa	Known RBP	9.36	□□□□□ -0.91
CNOT2-238	ENST00000552422	LRRC59	Q96AG4	307 aa	Known RBP	9.36	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms