RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 C7orf43Q8WVR3 580 aa17.45■□□□□ 0.38
CACNB3-221ENST00000552022 A0A087WZG4 1122 aa17.44■□□□□ 0.38
CACNB3-221ENST00000552022 EPHX2P34913 555 aa17.44■□□□□ 0.38
CACNB3-221ENST00000552022 TBC1D2BQ9UPU7 963 aa17.44■□□□□ 0.38
CACNB3-221ENST00000552022 THSD7BQ9C0I4 1608 aa17.43■□□□□ 0.38
CACNB3-221ENST00000552022 MASTLQ96GX5 879 aa17.43■□□□□ 0.38
CACNB3-221ENST00000552022 IL13P35225 146 aa17.42■□□□□ 0.38
CACNB3-221ENST00000552022 PNMA8AQ86V59 439 aaPredicted RBP17.42■□□□□ 0.38
CACNB3-221ENST00000552022 ABT1Q9ULW3 272 aaKnown RBP17.42■□□□□ 0.38
CACNB3-221ENST00000552022 CASP8AP2Q9UKL3 1982 aa17.41■□□□□ 0.38
CACNB3-221ENST00000552022 STARD3NLO95772 234 aa17.41■□□□□ 0.38
CACNB3-221ENST00000552022 CNBD1Q8NA66 436 aa17.41■□□□□ 0.38
CACNB3-221ENST00000552022 ZNF277Q9NRM2 450 aaPredicted RBP17.41■□□□□ 0.38
CACNB3-221ENST00000552022 RNF123Q5XPI4 1314 aa17.41■□□□□ 0.38
CACNB3-221ENST00000552022 TRPM7Q96QT4 1865 aa17.4■□□□□ 0.38
CACNB3-221ENST00000552022 SETDB2Q96T68 719 aa17.4■□□□□ 0.38
CACNB3-221ENST00000552022 DDX21Q9NR30 783 aaKnown RBP eCLIP17.4■□□□□ 0.38
CACNB3-221ENST00000552022 FKBP4Q02790 459 aaKnown RBP eCLIP17.39■□□□□ 0.37
CACNB3-221ENST00000552022 FMR1Q06787 632 aaKnown RBP eCLIP17.39■□□□□ 0.37
CACNB3-221ENST00000552022 CCDC93Q567U6 631 aa17.39■□□□□ 0.37
CACNB3-221ENST00000552022 OLFM4Q6UX06 510 aa17.39■□□□□ 0.37
CACNB3-221ENST00000552022 CAPNS2Q96L46 248 aa17.39■□□□□ 0.37
CACNB3-221ENST00000552022 GPR101Q96P66 508 aaPredicted RBP17.39■□□□□ 0.37
CACNB3-221ENST00000552022 PDE4DIPQ5VU43 2346 aa17.38■□□□□ 0.37
CACNB3-221ENST00000552022 FZD9O00144 591 aa17.38■□□□□ 0.37
CACNB3-221ENST00000552022 NPHP1O15259 732 aa17.38■□□□□ 0.37
CACNB3-221ENST00000552022 ST5P78524 1137 aa17.38■□□□□ 0.37
CACNB3-221ENST00000552022 POLR3GLQ9BT43 218 aa17.38■□□□□ 0.37
CACNB3-221ENST00000552022 BEGAINQ9BUH8 593 aa17.38■□□□□ 0.37
CACNB3-221ENST00000552022 TSKSQ9UJT2 592 aa17.38■□□□□ 0.37
CACNB3-221ENST00000552022 ZNF330Q9Y3S2 320 aaPredicted RBP17.38■□□□□ 0.37
CACNB3-221ENST00000552022 CAMTA2O94983 1202 aa17.37■□□□□ 0.37
CACNB3-221ENST00000552022 IL6STP40189 918 aaPredicted RBP17.37■□□□□ 0.37
CACNB3-221ENST00000552022 CYP4F22Q6NT55 531 aa17.37■□□□□ 0.37
CACNB3-221ENST00000552022 LTBP1Q14766 1721 aa17.36■□□□□ 0.37
CACNB3-221ENST00000552022 BCORQ6W2J9 1755 aa17.36■□□□□ 0.37
CACNB3-221ENST00000552022 ECE1P42892 770 aa17.36■□□□□ 0.37
CACNB3-221ENST00000552022 MTHFSDQ2M296 383 aaKnown RBP17.36■□□□□ 0.37
CACNB3-221ENST00000552022 GPC2Q8N158 579 aa17.36■□□□□ 0.37
CACNB3-221ENST00000552022 ZNF496Q96IT1 587 aaPredicted RBP17.36■□□□□ 0.37
CACNB3-221ENST00000552022 MCOLN1Q9GZU1 580 aa17.36■□□□□ 0.37
CACNB3-221ENST00000552022 PANK3Q9H999 370 aa17.36■□□□□ 0.37
CACNB3-221ENST00000552022 GRM1Q13255 1194 aa17.35■□□□□ 0.37
CACNB3-221ENST00000552022 CST9Q5W186 159 aa17.35■□□□□ 0.37
CACNB3-221ENST00000552022 PAXIP1Q6ZW49 1069 aaPredicted RBP17.35■□□□□ 0.37
CACNB3-221ENST00000552022 MORC1Q86VD1 984 aa17.35■□□□□ 0.37
CACNB3-221ENST00000552022 TTC5Q8N0Z6 440 aa17.35■□□□□ 0.37
CACNB3-221ENST00000552022 CFAP44Q96MT7 982 aa17.35■□□□□ 0.37
CACNB3-221ENST00000552022 KLRG2A4D1S0 409 aaPredicted RBP17.34■□□□□ 0.37
CACNB3-221ENST00000552022 AOC2O75106 756 aa17.34■□□□□ 0.37
CACNB3-221ENST00000552022 A1BGP04217 495 aa17.34■□□□□ 0.37
CACNB3-221ENST00000552022 HMOX1P09601 288 aa17.34■□□□□ 0.37
CACNB3-221ENST00000552022 NPR1P16066 1061 aa17.34■□□□□ 0.37
CACNB3-221ENST00000552022 IARSP41252 1262 aaKnown RBP17.34■□□□□ 0.37
CACNB3-221ENST00000552022 RTKN2Q8IZC4 609 aa17.34■□□□□ 0.37
CACNB3-221ENST00000552022 TEX13AQ9BXU3 409 aaPredicted RBP17.34■□□□□ 0.37
CACNB3-221ENST00000552022 HEG1Q9ULI3 1381 aa17.34■□□□□ 0.37
CACNB3-221ENST00000552022 SYNE4Q8N205 404 aa17.33■□□□□ 0.36
CACNB3-221ENST00000552022 SIPA1L3O60292 1781 aaPredicted RBP17.33■□□□□ 0.36
CACNB3-221ENST00000552022 MAP2K2P36507 400 aa17.32■□□□□ 0.36
CACNB3-221ENST00000552022 ZNF790Q6PG37 636 aa17.32■□□□□ 0.36
CACNB3-221ENST00000552022 NBPF5PQ86XG9 351 aaPredicted RBP17.32■□□□□ 0.36
CACNB3-221ENST00000552022 TLL2Q9Y6L7 1015 aa17.32■□□□□ 0.36
CACNB3-221ENST00000552022 TRAF5O00463 557 aa17.31■□□□□ 0.36
CACNB3-221ENST00000552022 COL4A5P29400 1685 aa17.31■□□□□ 0.36
CACNB3-221ENST00000552022 EPS15P42566 896 aa17.3■□□□□ 0.36
CACNB3-221ENST00000552022 DZIP3Q86Y13 1208 aaKnown RBP17.3■□□□□ 0.36
CACNB3-221ENST00000552022 SNED1Q8TER0 1413 aa17.3■□□□□ 0.36
CACNB3-221ENST00000552022 SCNN1DP51172 638 aa17.29■□□□□ 0.36
CACNB3-221ENST00000552022 GJA3Q9Y6H8 435 aa17.29■□□□□ 0.36
CACNB3-221ENST00000552022 DGKZQ13574 1117 aa17.28■□□□□ 0.36
CACNB3-221ENST00000552022 CLEC4GQ6UXB4 293 aa17.28■□□□□ 0.36
CACNB3-221ENST00000552022 NPM2Q86SE8 214 aaKnown RBP17.28■□□□□ 0.36
CACNB3-221ENST00000552022 IL17REQ8NFR9 667 aa17.28■□□□□ 0.36
CACNB3-221ENST00000552022 JDP2Q8WYK2 163 aa17.28■□□□□ 0.36
CACNB3-221ENST00000552022 PSMD1Q99460 953 aa17.28■□□□□ 0.36
CACNB3-221ENST00000552022 CA12O43570 354 aa17.27■□□□□ 0.36
CACNB3-221ENST00000552022 LMOD1P29536 600 aaPredicted RBP17.27■□□□□ 0.36
CACNB3-221ENST00000552022 ALDH1B1P30837 517 aa17.27■□□□□ 0.36
CACNB3-221ENST00000552022 PIP4K2AP48426 406 aaPredicted RBP17.27■□□□□ 0.36
CACNB3-221ENST00000552022 EIF6P56537 245 aaKnown RBP17.27■□□□□ 0.36
CACNB3-221ENST00000552022 TPTE2Q6XPS3 522 aa17.26■□□□□ 0.35
CACNB3-221ENST00000552022 USP50Q70EL3 339 aaPredicted RBP17.26■□□□□ 0.35
CACNB3-221ENST00000552022 SAPCD2Q86UD0 394 aa17.26■□□□□ 0.35
CACNB3-221ENST00000552022 FMNL2Q96PY5 1086 aa17.26■□□□□ 0.35
CACNB3-221ENST00000552022 KCNQ3O43525 872 aa17.25■□□□□ 0.35
CACNB3-221ENST00000552022 TEFQ10587 303 aa17.25■□□□□ 0.35
CACNB3-221ENST00000552022 USP16Q9Y5T5 823 aa17.25■□□□□ 0.35
CACNB3-221ENST00000552022 BRPF1P55201 1214 aaPredicted RBP17.24■□□□□ 0.35
CACNB3-221ENST00000552022 FAM177BA6PVY3 158 aa17.23■□□□□ 0.35
CACNB3-221ENST00000552022 NIP7Q9Y221 180 aaKnown RBP eCLIP17.23■□□□□ 0.35
CACNB3-221ENST00000552022 PRAMEF22A3QJZ6 481 aa17.22■□□□□ 0.35
CACNB3-221ENST00000552022 GNAT3A8MTJ3 354 aa17.22■□□□□ 0.35
CACNB3-221ENST00000552022 CELF2O95319 508 aaKnown RBP17.22■□□□□ 0.35
CACNB3-221ENST00000552022 CIAPIN1Q6FI81 312 aa17.22■□□□□ 0.35
CACNB3-221ENST00000552022 HHIPL1Q96JK4 782 aa17.22■□□□□ 0.35
CACNB3-221ENST00000552022 ZNF652Q9Y2D9 606 aa17.22■□□□□ 0.35
CACNB3-221ENST00000552022 ZIC5Q96T25 663 aa17.21■□□□□ 0.35
CACNB3-221ENST00000552022 CRY2Q49AN0 593 aa17.2■□□□□ 0.34
CACNB3-221ENST00000552022 CC2D2BQ6DHV5 1058 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms