RNA–Protein interactions for RNA: ENST00000551681.1

RRN3P1-203, Transcript of RRN3 homolog, RNA polymerase I transcription factor pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene RRN3P1, Length 1,151 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P1-203ENST00000551681 KRT24Q2M2I5 525 aa12.46□□□□□ -0.41
RRN3P1-203ENST00000551681 C8orf58Q8NAV2 365 aa12.46□□□□□ -0.41
RRN3P1-203ENST00000551681 SETDB2Q96T68 719 aa12.46□□□□□ -0.41
RRN3P1-203ENST00000551681 SGIP1Q9BQI5 828 aa12.46□□□□□ -0.41
RRN3P1-203ENST00000551681 SRP68Q9UHB9 627 aaKnown RBP12.46□□□□□ -0.41
RRN3P1-203ENST00000551681 UTRNP46939 3433 aa12.45□□□□□ -0.42
RRN3P1-203ENST00000551681 CAMTA2O94983 1202 aa12.45□□□□□ -0.42
RRN3P1-203ENST00000551681 EXOSC9Q06265 439 aaKnown RBP12.45□□□□□ -0.42
RRN3P1-203ENST00000551681 FKBP8Q14318 412 aa12.45□□□□□ -0.42
RRN3P1-203ENST00000551681 NECTIN2Q92692 538 aa12.45□□□□□ -0.42
RRN3P1-203ENST00000551681 CD2APQ9Y5K6 639 aa12.45□□□□□ -0.42
RRN3P1-203ENST00000551681 ATP10DQ9P241 1426 aa12.45□□□□□ -0.42
RRN3P1-203ENST00000551681 PIP4K2AP48426 406 aaPredicted RBP12.44□□□□□ -0.42
RRN3P1-203ENST00000551681 PDIA6Q15084 440 aa12.44□□□□□ -0.42
RRN3P1-203ENST00000551681 SMIM5Q71RC9 77 aa12.44□□□□□ -0.42
RRN3P1-203ENST00000551681 NYXQ9GZU5 481 aa12.44□□□□□ -0.42
RRN3P1-203ENST00000551681 PDZRN3Q9UPQ7 1066 aa12.44□□□□□ -0.42
RRN3P1-203ENST00000551681 NUP98P52948 1817 aa12.44□□□□□ -0.42
RRN3P1-203ENST00000551681 RNF123Q5XPI4 1314 aa12.43□□□□□ -0.42
RRN3P1-203ENST00000551681 NFIXQ14938 502 aa12.43□□□□□ -0.42
RRN3P1-203ENST00000551681 PARP10Q53GL7 1025 aa12.43□□□□□ -0.42
RRN3P1-203ENST00000551681 GIGYF2Q6Y7W6 1299 aaKnown RBP12.43□□□□□ -0.42
RRN3P1-203ENST00000551681 COPS6Q7L5N1 327 aa12.43□□□□□ -0.42
RRN3P1-203ENST00000551681 KLHL34Q8N239 644 aa12.43□□□□□ -0.42
RRN3P1-203ENST00000551681 PLBD2Q8NHP8 589 aa12.43□□□□□ -0.42
RRN3P1-203ENST00000551681 XAGE3Q8WTP9 111 aa12.43□□□□□ -0.42
RRN3P1-203ENST00000551681 ANKRD36CQ5JPF3 1778 aa12.43□□□□□ -0.42
RRN3P1-203ENST00000551681 IBTKQ9P2D0 1353 aaPredicted RBP12.43□□□□□ -0.42
RRN3P1-203ENST00000551681 VAMP4O75379 141 aa12.42□□□□□ -0.42
RRN3P1-203ENST00000551681 GTF2E1P29083 439 aaPredicted RBP12.42□□□□□ -0.42
RRN3P1-203ENST00000551681 TM4SF1P30408 202 aa12.42□□□□□ -0.42
RRN3P1-203ENST00000551681 ST5P78524 1137 aa12.42□□□□□ -0.42
RRN3P1-203ENST00000551681 AIMP1Q12904 312 aaKnown RBP12.42□□□□□ -0.42
RRN3P1-203ENST00000551681 TPTE2Q6XPS3 522 aa12.42□□□□□ -0.42
RRN3P1-203ENST00000551681 ANKRD13DQ6ZTN6 518 aa12.42□□□□□ -0.42
RRN3P1-203ENST00000551681 RIC3Q7Z5B4 369 aa12.42□□□□□ -0.42
RRN3P1-203ENST00000551681 TSPYL6Q8N831 410 aa12.42□□□□□ -0.42
RRN3P1-203ENST00000551681 CNBD1Q8NA66 436 aa12.42□□□□□ -0.42
RRN3P1-203ENST00000551681 ZBTB3Q9H5J0 574 aa12.42□□□□□ -0.42
RRN3P1-203ENST00000551681 NIP7Q9Y221 180 aaKnown RBP eCLIP12.42□□□□□ -0.42
RRN3P1-203ENST00000551681 POLRMTO00411 1230 aaKnown RBP12.41□□□□□ -0.42
RRN3P1-203ENST00000551681 SLC4A2P04920 1241 aa12.41□□□□□ -0.42
RRN3P1-203ENST00000551681 SERPINB2P05120 415 aa12.41□□□□□ -0.42
RRN3P1-203ENST00000551681 HSP90B1P14625 803 aaKnown RBP12.41□□□□□ -0.42
RRN3P1-203ENST00000551681 NEXNQ0ZGT2 675 aa12.41□□□□□ -0.42
RRN3P1-203ENST00000551681 PROSER3Q2NL68 480 aa12.41□□□□□ -0.42
RRN3P1-203ENST00000551681 ALDH1L2Q3SY69 923 aa12.41□□□□□ -0.42
RRN3P1-203ENST00000551681 TTLL7Q6ZT98 887 aa12.41□□□□□ -0.42
RRN3P1-203ENST00000551681 C10orf71Q711Q0 1435 aa12.41□□□□□ -0.42
RRN3P1-203ENST00000551681 LRP10Q7Z4F1 713 aa12.41□□□□□ -0.42
RRN3P1-203ENST00000551681 PPP1R42Q7Z4L9 355 aa12.41□□□□□ -0.42
RRN3P1-203ENST00000551681 NBPF5PQ86XG9 351 aaPredicted RBP12.41□□□□□ -0.42
RRN3P1-203ENST00000551681 FHDC1Q9C0D6 1143 aaPredicted RBP12.41□□□□□ -0.42
RRN3P1-203ENST00000551681 BCL2L12Q9HB09 334 aa12.41□□□□□ -0.42
RRN3P1-203ENST00000551681 SPINK5Q9NQ38 1064 aaPredicted RBP12.41□□□□□ -0.42
RRN3P1-203ENST00000551681 NRXN2Q9P2S2 1712 aa12.41□□□□□ -0.42
RRN3P1-203ENST00000551681 KIF13BQ9NQT8 1826 aa12.41□□□□□ -0.42
RRN3P1-203ENST00000551681 ANXA1P04083 346 aa12.4□□□□□ -0.42
RRN3P1-203ENST00000551681 TGFB2P61812 414 aa12.4□□□□□ -0.42
RRN3P1-203ENST00000551681 TBC1D9BQ66K14 1250 aa12.4□□□□□ -0.42
RRN3P1-203ENST00000551681 BICDL1Q6ZP65 573 aa12.4□□□□□ -0.42
RRN3P1-203ENST00000551681 TRMT2AQ8IZ69 625 aaKnown RBP12.4□□□□□ -0.42
RRN3P1-203ENST00000551681 SYT17Q9BSW7 474 aa12.4□□□□□ -0.42
RRN3P1-203ENST00000551681 ARFGEF2Q9Y6D5 1785 aa12.4□□□□□ -0.42
RRN3P1-203ENST00000551681 AFDNP55196 1824 aaKnown RBP12.39□□□□□ -0.43
RRN3P1-203ENST00000551681 PDE6BP35913 854 aa12.39□□□□□ -0.43
RRN3P1-203ENST00000551681 DDR1Q08345 913 aa12.39□□□□□ -0.43
RRN3P1-203ENST00000551681 FKBP5Q13451 457 aaPredicted RBP12.39□□□□□ -0.43
RRN3P1-203ENST00000551681 PTPRCP08575 1304 aa12.38□□□□□ -0.43
RRN3P1-203ENST00000551681 FLIIQ13045 1269 aa12.38□□□□□ -0.43
RRN3P1-203ENST00000551681 TCIRG1Q13488 830 aa12.38□□□□□ -0.43
RRN3P1-203ENST00000551681 KSR2Q6VAB6 950 aa12.38□□□□□ -0.43
RRN3P1-203ENST00000551681 CDCA7LQ96GN5 454 aa12.38□□□□□ -0.43
RRN3P1-203ENST00000551681 KIF16BQ96L93 1317 aa12.37□□□□□ -0.43
RRN3P1-203ENST00000551681 TRIM28Q13263 835 aaKnown RBP12.37□□□□□ -0.43
RRN3P1-203ENST00000551681 HLFQ16534 295 aa12.37□□□□□ -0.43
RRN3P1-203ENST00000551681 ZNF34Q8IZ26 560 aa12.37□□□□□ -0.43
RRN3P1-203ENST00000551681 BRIP1Q9BX63 1249 aa12.37□□□□□ -0.43
RRN3P1-203ENST00000551681 RIC1Q4ADV7 1423 aa12.37□□□□□ -0.43
RRN3P1-203ENST00000551681 H0YIN7 160 aa12.36□□□□□ -0.43
RRN3P1-203ENST00000551681 GPTP24298 496 aa12.36□□□□□ -0.43
RRN3P1-203ENST00000551681 ZNF784Q8NCA9 323 aaPredicted RBP12.36□□□□□ -0.43
RRN3P1-203ENST00000551681 CCDC191Q8NCU4 936 aa12.36□□□□□ -0.43
RRN3P1-203ENST00000551681 UTP14AQ9BVJ6 771 aaKnown RBP12.36□□□□□ -0.43
RRN3P1-203ENST00000551681 PHAXQ9H814 394 aaKnown RBP12.36□□□□□ -0.43
RRN3P1-203ENST00000551681 SMC4Q9NTJ3 1288 aa12.36□□□□□ -0.43
RRN3P1-203ENST00000551681 PI4KAP2A4QPH2 592 aa12.35□□□□□ -0.43
RRN3P1-203ENST00000551681 PRR5LQ6MZQ0 368 aa12.35□□□□□ -0.43
RRN3P1-203ENST00000551681 PI4KAP1Q8N8J0 262 aa12.35□□□□□ -0.43
RRN3P1-203ENST00000551681 DNAAF4Q8WXU2 420 aa12.35□□□□□ -0.43
RRN3P1-203ENST00000551681 METTL22Q9BUU2 404 aaPredicted RBP12.35□□□□□ -0.43
RRN3P1-203ENST00000551681 MAP3K2Q9Y2U5 619 aa12.35□□□□□ -0.43
RRN3P1-203ENST00000551681 SH3TC1Q8TE82 1336 aa12.35□□□□□ -0.43
RRN3P1-203ENST00000551681 IPO8O15397 1037 aaKnown RBP12.34□□□□□ -0.43
RRN3P1-203ENST00000551681 BRPF1P55201 1214 aaPredicted RBP12.34□□□□□ -0.43
RRN3P1-203ENST00000551681 NLRP10Q86W26 655 aa12.34□□□□□ -0.43
RRN3P1-203ENST00000551681 ISCA1Q9BUE6 129 aa12.34□□□□□ -0.43
RRN3P1-203ENST00000551681 CWC25Q9NXE8 425 aaPredicted RBP12.34□□□□□ -0.43
RRN3P1-203ENST00000551681 TRMT112Q9UI30 125 aaKnown RBP12.34□□□□□ -0.43
RRN3P1-203ENST00000551681 PXDNLA1KZ92 1463 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms