RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 MVPQ14764 893 aaKnown RBP25.59■■□□□ 1.69
NPAS3-210ENST00000551492 LMO7Q8WWI1 1683 aa25.59■■□□□ 1.69
NPAS3-210ENST00000551492 PDE3AQ14432 1141 aa25.59■■□□□ 1.69
NPAS3-210ENST00000551492 DCAF5Q96JK2 942 aa25.58■■□□□ 1.69
NPAS3-210ENST00000551492 EXOC5O00471 708 aa25.58■■□□□ 1.68
NPAS3-210ENST00000551492 CAPN2P17655 700 aa25.57■■□□□ 1.68
NPAS3-210ENST00000551492 ALDH1L2Q3SY69 923 aa25.57■■□□□ 1.68
NPAS3-210ENST00000551492 STK31Q9BXU1 1019 aa25.57■■□□□ 1.68
NPAS3-210ENST00000551492 CHMP5Q9NZZ3 219 aa25.57■■□□□ 1.68
NPAS3-210ENST00000551492 NCAPD2Q15021 1401 aa25.57■■□□□ 1.68
NPAS3-210ENST00000551492 KCNQ2O43526 872 aa25.56■■□□□ 1.68
NPAS3-210ENST00000551492 USP21Q9UK80 565 aa25.56■■□□□ 1.68
NPAS3-210ENST00000551492 DDX11L8A8MPP1 907 aa25.56■■□□□ 1.68
NPAS3-210ENST00000551492 GIGYF1O75420 1035 aaPredicted RBP25.56■■□□□ 1.68
NPAS3-210ENST00000551492 PRIM1P49642 420 aaKnown RBP25.56■■□□□ 1.68
NPAS3-210ENST00000551492 MMP14P50281 582 aa25.56■■□□□ 1.68
NPAS3-210ENST00000551492 RBM42Q9BTD8 480 aaKnown RBP25.55■■□□□ 1.68
NPAS3-210ENST00000551492 OVOS2A0A0G2JMS6 1433 aa25.55■■□□□ 1.68
NPAS3-210ENST00000551492 TTC5Q8N0Z6 440 aa25.55■■□□□ 1.68
NPAS3-210ENST00000551492 PCDH11XQ9BZA7 1347 aa25.55■■□□□ 1.68
NPAS3-210ENST00000551492 PCDH11YQ9BZA8 1340 aa25.55■■□□□ 1.68
NPAS3-210ENST00000551492 FLIIQ13045 1269 aa25.55■■□□□ 1.68
NPAS3-210ENST00000551492 KIF16BQ96L93 1317 aa25.54■■□□□ 1.68
NPAS3-210ENST00000551492 EP400NLQ6ZTU2 488 aa25.54■■□□□ 1.68
NPAS3-210ENST00000551492 APBB1O00213 710 aa25.54■■□□□ 1.68
NPAS3-210ENST00000551492 IPO8O15397 1037 aaKnown RBP25.54■■□□□ 1.68
NPAS3-210ENST00000551492 CT47B1P0C2W7 299 aaPredicted RBP25.54■■□□□ 1.68
NPAS3-210ENST00000551492 SLC20A2Q08357 652 aa25.54■■□□□ 1.68
NPAS3-210ENST00000551492 PIGBQ92521 554 aa25.54■■□□□ 1.68
NPAS3-210ENST00000551492 SPATA31A1Q5TZJ5 1347 aa25.53■■□□□ 1.68
NPAS3-210ENST00000551492 LRP6O75581 1613 aa25.53■■□□□ 1.68
NPAS3-210ENST00000551492 TULP1O00294 542 aaPredicted RBP25.53■■□□□ 1.68
NPAS3-210ENST00000551492 TRERF1Q96PN7 1200 aa25.53■■□□□ 1.68
NPAS3-210ENST00000551492 U2AF2P26368 475 aaKnown RBP eCLIP25.53■■□□□ 1.68
NPAS3-210ENST00000551492 DDB1Q16531 1140 aa25.53■■□□□ 1.68
NPAS3-210ENST00000551492 SMIM5Q71RC9 77 aa25.53■■□□□ 1.68
NPAS3-210ENST00000551492 VIRMAQ69YN4 1812 aaKnown RBP25.52■■□□□ 1.68
NPAS3-210ENST00000551492 CCDC30Q5VVM6 783 aa25.52■■□□□ 1.68
NPAS3-210ENST00000551492 MARCH10Q8NA82 808 aaPredicted RBP25.52■■□□□ 1.68
NPAS3-210ENST00000551492 A1BGP04217 495 aa25.51■■□□□ 1.67
NPAS3-210ENST00000551492 CSPP1Q1MSJ5 1256 aa25.51■■□□□ 1.67
NPAS3-210ENST00000551492 JCADQ9P266 1359 aa25.51■■□□□ 1.67
NPAS3-210ENST00000551492 UNC5CLQ8IV45 518 aa25.51■■□□□ 1.67
NPAS3-210ENST00000551492 MEIS3Q99687 375 aa25.51■■□□□ 1.67
NPAS3-210ENST00000551492 PATL2C9JE40 543 aaKnown RBP25.5■■□□□ 1.67
NPAS3-210ENST00000551492 TMED8Q6PL24 325 aaPredicted RBP25.5■■□□□ 1.67
NPAS3-210ENST00000551492 MYRIPQ8NFW9 859 aa25.5■■□□□ 1.67
NPAS3-210ENST00000551492 PI4KAP2A4QPH2 592 aa25.5■■□□□ 1.67
NPAS3-210ENST00000551492 PI4KAP1Q8N8J0 262 aa25.5■■□□□ 1.67
NPAS3-210ENST00000551492 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.49■■□□□ 1.67
NPAS3-210ENST00000551492 TMOD3Q9NYL9 352 aa25.49■■□□□ 1.67
NPAS3-210ENST00000551492 ZKSCAN5Q9Y2L8 839 aa25.49■■□□□ 1.67
NPAS3-210ENST00000551492 AFF2P51816 1311 aa25.48■■□□□ 1.67
NPAS3-210ENST00000551492 LOC102724159A0A0B4J2E5 919 aa25.46■■□□□ 1.67
NPAS3-210ENST00000551492 PWP2Q15269 919 aaKnown RBP25.46■■□□□ 1.67
NPAS3-210ENST00000551492 SPATA31A5Q5VU36 1347 aa25.46■■□□□ 1.67
NPAS3-210ENST00000551492 SPATA31A7Q8IWB4 1347 aa25.46■■□□□ 1.67
NPAS3-210ENST00000551492 ZBTB7BO15156 539 aaPredicted RBP25.46■■□□□ 1.67
NPAS3-210ENST00000551492 FAM193AP78312 1265 aa25.45■■□□□ 1.67
NPAS3-210ENST00000551492 UTRNP46939 3433 aa25.45■■□□□ 1.67
NPAS3-210ENST00000551492 BCL9LQ86UU0 1499 aa25.44■■□□□ 1.66
NPAS3-210ENST00000551492 CLGNO14967 610 aa25.44■■□□□ 1.66
NPAS3-210ENST00000551492 CWF19L2Q2TBE0 894 aaKnown RBP25.44■■□□□ 1.66
NPAS3-210ENST00000551492 ZBTB40Q9NUA8 1239 aa25.44■■□□□ 1.66
NPAS3-210ENST00000551492 TBC1D32Q96NH3 1257 aa25.43■■□□□ 1.66
NPAS3-210ENST00000551492 DDX19BQ9UMR2 479 aa25.43■■□□□ 1.66
NPAS3-210ENST00000551492 PDIA6Q15084 440 aa25.42■■□□□ 1.66
NPAS3-210ENST00000551492 COPS6Q7L5N1 327 aa25.42■■□□□ 1.66
NPAS3-210ENST00000551492 DNAJC10Q8IXB1 793 aa25.42■■□□□ 1.66
NPAS3-210ENST00000551492 RGS12O14924 1447 aa25.42■■□□□ 1.66
NPAS3-210ENST00000551492 PDCL2Q8N4E4 241 aa25.41■■□□□ 1.66
NPAS3-210ENST00000551492 TNPO1Q92973 898 aaKnown RBP25.41■■□□□ 1.66
NPAS3-210ENST00000551492 SLC4A9Q96Q91 983 aa25.41■■□□□ 1.66
NPAS3-210ENST00000551492 API5Q9BZZ5 524 aaKnown RBP25.41■■□□□ 1.66
NPAS3-210ENST00000551492 TIGD1Q96MW7 591 aa25.41■■□□□ 1.66
NPAS3-210ENST00000551492 ATG3Q9NT62 314 aa25.41■■□□□ 1.66
NPAS3-210ENST00000551492 PLCH1Q4KWH8 1693 aa25.41■■□□□ 1.66
NPAS3-210ENST00000551492 HSP90AB1P08238 724 aaKnown RBP25.41■■□□□ 1.66
NPAS3-210ENST00000551492 XAGE3Q8WTP9 111 aa25.41■■□□□ 1.66
NPAS3-210ENST00000551492 LRRC37A3O60309 1634 aa25.4■■□□□ 1.66
NPAS3-210ENST00000551492 COL14A1Q05707 1796 aaKnown RBP25.4■■□□□ 1.66
NPAS3-210ENST00000551492 ABCC4O15439 1325 aa25.4■■□□□ 1.66
NPAS3-210ENST00000551492 ATP5J2-PTCD1G3V325 749 aa25.4■■□□□ 1.66
NPAS3-210ENST00000551492 HS1BP3Q53T59 392 aa25.4■■□□□ 1.66
NPAS3-210ENST00000551492 SIRT2Q8IXJ6 389 aa25.4■■□□□ 1.66
NPAS3-210ENST00000551492 FMNL2Q96PY5 1086 aa25.4■■□□□ 1.66
NPAS3-210ENST00000551492 MAP3K2Q9Y2U5 619 aa25.4■■□□□ 1.66
NPAS3-210ENST00000551492 NBPF26B4DH59 902 aa25.39■■□□□ 1.65
NPAS3-210ENST00000551492 NBPF14Q5TI25 921 aa25.39■■□□□ 1.65
NPAS3-210ENST00000551492 NBPF10Q6P3W6 841 aaKnown RBP25.39■■□□□ 1.65
NPAS3-210ENST00000551492 NBPF15Q8N660 670 aa25.39■■□□□ 1.65
NPAS3-210ENST00000551492 CNKSR2Q8WXI2 1034 aa25.38■■□□□ 1.65
NPAS3-210ENST00000551492 BCL2L12Q9HB09 334 aa25.38■■□□□ 1.65
NPAS3-210ENST00000551492 SNRPA1P09661 255 aaKnown RBP25.38■■□□□ 1.65
NPAS3-210ENST00000551492 SCN11AQ9UI33 1791 aa25.37■■□□□ 1.65
NPAS3-210ENST00000551492 TTLL7Q6ZT98 887 aa25.37■■□□□ 1.65
NPAS3-210ENST00000551492 QTRT2Q9H974 415 aaKnown RBP25.37■■□□□ 1.65
NPAS3-210ENST00000551492 COL22A1Q8NFW1 1626 aaPredicted RBP25.37■■□□□ 1.65
NPAS3-210ENST00000551492 NBPF7P0C2Y1 421 aaPredicted RBP25.36■■□□□ 1.65
NPAS3-210ENST00000551492 HOMEZQ8IX15 550 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms