RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 MIS18AQ9NYP9 233 aa23.92■■□□□ 1.42
PRPF40B-215ENST00000551418 RTF1Q92541 710 aaKnown RBP23.91■■□□□ 1.42
PRPF40B-215ENST00000551418 SNRPA1P09661 255 aaKnown RBP23.9■■□□□ 1.42
PRPF40B-215ENST00000551418 SRGNP10124 158 aa23.9■■□□□ 1.42
PRPF40B-215ENST00000551418 VEGFAP15692 232 aaPredicted RBP23.9■■□□□ 1.42
PRPF40B-215ENST00000551418 NPM2Q86SE8 214 aaKnown RBP23.9■■□□□ 1.42
PRPF40B-215ENST00000551418 SMC1BQ8NDV3 1235 aa23.9■■□□□ 1.42
PRPF40B-215ENST00000551418 KLRG1Q96E93 195 aa23.9■■□□□ 1.42
PRPF40B-215ENST00000551418 DICER1Q9UPY3 1922 aaKnown RBP23.9■■□□□ 1.42
PRPF40B-215ENST00000551418 NPHP1O15259 732 aa23.88■■□□□ 1.41
PRPF40B-215ENST00000551418 PDZRN3Q9UPQ7 1066 aa23.88■■□□□ 1.41
PRPF40B-215ENST00000551418 ERFEQ4G0M1 354 aa23.87■■□□□ 1.41
PRPF40B-215ENST00000551418 STYK1Q6J9G0 422 aa23.87■■□□□ 1.41
PRPF40B-215ENST00000551418 PRPF40BQ6NWY9 871 aaKnown RBP23.87■■□□□ 1.41
PRPF40B-215ENST00000551418 ST5P78524 1137 aa23.86■■□□□ 1.41
PRPF40B-215ENST00000551418 DLG5Q8TDM6 1919 aa23.86■■□□□ 1.41
PRPF40B-215ENST00000551418 FAM177BA6PVY3 158 aa23.85■■□□□ 1.41
PRPF40B-215ENST00000551418 TAF7Q15545 349 aaPredicted RBP23.85■■□□□ 1.41
PRPF40B-215ENST00000551418 HLFQ16534 295 aa23.85■■□□□ 1.41
PRPF40B-215ENST00000551418 NBPF5PQ86XG9 351 aaPredicted RBP23.85■■□□□ 1.41
PRPF40B-215ENST00000551418 JMYQ8N9B5 988 aa23.85■■□□□ 1.41
PRPF40B-215ENST00000551418 CNKSR1Q969H4 720 aa23.85■■□□□ 1.41
PRPF40B-215ENST00000551418 HTATSF1O43719 755 aaKnown RBP23.84■■□□□ 1.41
PRPF40B-215ENST00000551418 CLEC4GQ6UXB4 293 aa23.84■■□□□ 1.41
PRPF40B-215ENST00000551418 C7orf43Q8WVR3 580 aa23.84■■□□□ 1.41
PRPF40B-215ENST00000551418 MASTLQ96GX5 879 aa23.84■■□□□ 1.41
PRPF40B-215ENST00000551418 OLFM4Q6UX06 510 aa23.83■■□□□ 1.41
PRPF40B-215ENST00000551418 TAOK3Q9H2K8 898 aa23.83■■□□□ 1.41
PRPF40B-215ENST00000551418 ARFGEF2Q9Y6D5 1785 aa23.83■■□□□ 1.4
PRPF40B-215ENST00000551418 LTBP3Q9NS15 1303 aa23.83■■□□□ 1.4
PRPF40B-215ENST00000551418 DDNO94850 711 aaPredicted RBP23.82■■□□□ 1.4
PRPF40B-215ENST00000551418 DPY19L2Q6NUT2 758 aa23.82■■□□□ 1.4
PRPF40B-215ENST00000551418 THUMPD2Q9BTF0 503 aaKnown RBP23.82■■□□□ 1.4
PRPF40B-215ENST00000551418 NIP7Q9Y221 180 aaKnown RBP eCLIP23.82■■□□□ 1.4
PRPF40B-215ENST00000551418 NGEFQ8N5V2 710 aa23.81■■□□□ 1.4
PRPF40B-215ENST00000551418 POTEIP0CG38 1075 aa23.8■■□□□ 1.4
PRPF40B-215ENST00000551418 POTEJP0CG39 1038 aa23.8■■□□□ 1.4
PRPF40B-215ENST00000551418 PLEKHF1Q96S99 279 aa23.8■■□□□ 1.4
PRPF40B-215ENST00000551418 KLRG2A4D1S0 409 aaPredicted RBP23.79■■□□□ 1.4
PRPF40B-215ENST00000551418 ZNF652Q9Y2D9 606 aa23.79■■□□□ 1.4
PRPF40B-215ENST00000551418 COL13A1Q5TAT6 717 aaPredicted RBP23.78■■□□□ 1.4
PRPF40B-215ENST00000551418 TPTE2Q6XPS3 522 aa23.78■■□□□ 1.4
PRPF40B-215ENST00000551418 KDM3BQ7LBC6 1761 aa23.78■■□□□ 1.4
PRPF40B-215ENST00000551418 NPR1P16066 1061 aa23.77■■□□□ 1.4
PRPF40B-215ENST00000551418 LAMB4A4D0S4 1761 aa23.77■■□□□ 1.4
PRPF40B-215ENST00000551418 EIF4A1P60842 406 aaKnown RBP23.75■■□□□ 1.39
PRPF40B-215ENST00000551418 TTLL7Q6ZT98 887 aa23.75■■□□□ 1.39
PRPF40B-215ENST00000551418 ZNF277Q9NRM2 450 aaPredicted RBP23.75■■□□□ 1.39
PRPF40B-215ENST00000551418 RRP7AQ9Y3A4 280 aaKnown RBP23.75■■□□□ 1.39
PRPF40B-215ENST00000551418 NUP98P52948 1817 aa23.75■■□□□ 1.39
PRPF40B-215ENST00000551418 CCDC93Q567U6 631 aa23.74■■□□□ 1.39
PRPF40B-215ENST00000551418 NUTM1Q86Y26 1132 aa23.74■■□□□ 1.39
PRPF40B-215ENST00000551418 PCNTO95613 3336 aa23.74■■□□□ 1.39
PRPF40B-215ENST00000551418 NFE2L2Q16236 605 aa23.73■■□□□ 1.39
PRPF40B-215ENST00000551418 SOGA3Q5TF21 947 aa23.73■■□□□ 1.39
PRPF40B-215ENST00000551418 SLC51AQ86UW1 340 aa23.73■■□□□ 1.39
PRPF40B-215ENST00000551418 ABCC12Q96J65 1359 aa23.73■■□□□ 1.39
PRPF40B-215ENST00000551418 RGL2O15211 777 aa23.72■■□□□ 1.39
PRPF40B-215ENST00000551418 MYL6BP14649 208 aa23.72■■□□□ 1.39
PRPF40B-215ENST00000551418 ZNF541Q9H0D2 1346 aa23.72■■□□□ 1.39
PRPF40B-215ENST00000551418 FKBP4Q02790 459 aaKnown RBP eCLIP23.71■■□□□ 1.39
PRPF40B-215ENST00000551418 CHADLQ6NUI6 762 aa23.71■■□□□ 1.39
PRPF40B-215ENST00000551418 MAP3K15Q6ZN16 1313 aa23.7■■□□□ 1.38
PRPF40B-215ENST00000551418 GPTP24298 496 aa23.7■■□□□ 1.38
PRPF40B-215ENST00000551418 GTF2E1P29083 439 aaPredicted RBP23.7■■□□□ 1.38
PRPF40B-215ENST00000551418 PNISRQ8TF01 805 aaKnown RBP23.7■■□□□ 1.38
PRPF40B-215ENST00000551418 ZBTB3Q9H5J0 574 aa23.69■■□□□ 1.38
PRPF40B-215ENST00000551418 UBN2Q6ZU65 1347 aa23.68■■□□□ 1.38
PRPF40B-215ENST00000551418 ERVV-1B6SEH8 477 aa23.68■■□□□ 1.38
PRPF40B-215ENST00000551418 NEFMP07197 916 aa23.68■■□□□ 1.38
PRPF40B-215ENST00000551418 SYNE4Q8N205 404 aa23.68■■□□□ 1.38
PRPF40B-215ENST00000551418 TAF1DQ9H5J8 278 aaPredicted RBP23.68■■□□□ 1.38
PRPF40B-215ENST00000551418 CRY2Q49AN0 593 aa23.67■■□□□ 1.38
PRPF40B-215ENST00000551418 SUSD4Q5VX71 490 aa23.67■■□□□ 1.38
PRPF40B-215ENST00000551418 L3MBTL3Q96JM7 780 aaPredicted RBP23.67■■□□□ 1.38
PRPF40B-215ENST00000551418 HSPA1AP0DMV8 641 aaKnown RBP23.66■■□□□ 1.38
PRPF40B-215ENST00000551418 HSPA1BP0DMV9 641 aaKnown RBP23.66■■□□□ 1.38
PRPF40B-215ENST00000551418 ALDH1B1P30837 517 aa23.66■■□□□ 1.38
PRPF40B-215ENST00000551418 SNED1Q8TER0 1413 aa23.66■■□□□ 1.38
PRPF40B-215ENST00000551418 SCN4AP35499 1836 aa23.66■■□□□ 1.38
PRPF40B-215ENST00000551418 C3orf67Q6ZVT6 689 aa23.65■■□□□ 1.38
PRPF40B-215ENST00000551418 RTKN2Q8IZC4 609 aa23.65■■□□□ 1.38
PRPF40B-215ENST00000551418 MKRN1Q9UHC7 482 aaKnown RBP23.65■■□□□ 1.38
PRPF40B-215ENST00000551418 COL4A5P29400 1685 aa23.64■■□□□ 1.38
PRPF40B-215ENST00000551418 IARSP41252 1262 aaKnown RBP23.64■■□□□ 1.37
PRPF40B-215ENST00000551418 KIF6Q6ZMV9 814 aa23.64■■□□□ 1.37
PRPF40B-215ENST00000551418 ZNF34Q8IZ26 560 aa23.64■■□□□ 1.37
PRPF40B-215ENST00000551418 ANXA1P04083 346 aa23.63■■□□□ 1.37
PRPF40B-215ENST00000551418 PDIA6Q15084 440 aa23.63■■□□□ 1.37
PRPF40B-215ENST00000551418 LRP10Q7Z4F1 713 aa23.63■■□□□ 1.37
PRPF40B-215ENST00000551418 NYXQ9GZU5 481 aa23.63■■□□□ 1.37
PRPF40B-215ENST00000551418 CREBZFQ9NS37 354 aa23.63■■□□□ 1.37
PRPF40B-215ENST00000551418 MAPK8IP3Q9UPT6 1336 aa23.62■■□□□ 1.37
PRPF40B-215ENST00000551418 IQCA1LA6NCM1 817 aa23.62■■□□□ 1.37
PRPF40B-215ENST00000551418 FZD9O00144 591 aa23.62■■□□□ 1.37
PRPF40B-215ENST00000551418 PROSER3Q2NL68 480 aa23.62■■□□□ 1.37
PRPF40B-215ENST00000551418 EAPPQ56P03 285 aaPredicted RBP23.62■■□□□ 1.37
PRPF40B-215ENST00000551418 LDHDQ86WU2 507 aa23.62■■□□□ 1.37
PRPF40B-215ENST00000551418 PASKQ96RG2 1323 aa23.61■■□□□ 1.37
PRPF40B-215ENST00000551418 TCERG1O14776 1098 aaKnown RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms