RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 ADCY9O60503 1353 aa13.12□□□□□ -0.31
NEK3-203ENST00000551355 SBF2Q86WG5 1849 aa13.12□□□□□ -0.31
NEK3-203ENST00000551355 F6X3S4 739 aa13.12□□□□□ -0.31
NEK3-203ENST00000551355 HSP90AB3PQ58FF7 597 aa13.12□□□□□ -0.31
NEK3-203ENST00000551355 LINC00116Q8NCU8 138 aa13.12□□□□□ -0.31
NEK3-203ENST00000551355 LINS1Q8NG48 757 aa13.12□□□□□ -0.31
NEK3-203ENST00000551355 METTL22Q9BUU2 404 aaPredicted RBP13.12□□□□□ -0.31
NEK3-203ENST00000551355 TNNQ9UQP3 1299 aa13.12□□□□□ -0.31
NEK3-203ENST00000551355 KAT6BQ8WYB5 2073 aa13.11□□□□□ -0.31
NEK3-203ENST00000551355 ZBTB7BO15156 539 aaPredicted RBP13.11□□□□□ -0.31
NEK3-203ENST00000551355 RPS6KA4O75676 772 aa13.11□□□□□ -0.31
NEK3-203ENST00000551355 GNAI3P08754 354 aa13.11□□□□□ -0.31
NEK3-203ENST00000551355 PIP4K2AP48426 406 aaPredicted RBP13.11□□□□□ -0.31
NEK3-203ENST00000551355 TXNRD1Q16881 649 aa13.11□□□□□ -0.31
NEK3-203ENST00000551355 BEND3Q5T5X7 828 aa13.11□□□□□ -0.31
NEK3-203ENST00000551355 PPP4R3CPQ6ZMV5 832 aa13.11□□□□□ -0.31
NEK3-203ENST00000551355 MAP3K15Q6ZN16 1313 aa13.11□□□□□ -0.31
NEK3-203ENST00000551355 TJP1Q07157 1748 aa13.1□□□□□ -0.31
NEK3-203ENST00000551355 AK7Q96M32 723 aa13.1□□□□□ -0.31
NEK3-203ENST00000551355 ZBTB40Q9NUA8 1239 aa13.1□□□□□ -0.31
NEK3-203ENST00000551355 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
NEK3-203ENST00000551355 ZNF330Q9Y3S2 320 aaPredicted RBP13.1□□□□□ -0.31
NEK3-203ENST00000551355 BAG6P46379 1132 aa13.09□□□□□ -0.31
NEK3-203ENST00000551355 TRIM28Q13263 835 aaKnown RBP13.09□□□□□ -0.31
NEK3-203ENST00000551355 TTLL7Q6ZT98 887 aa13.09□□□□□ -0.31
NEK3-203ENST00000551355 DZIP3Q86Y13 1208 aaKnown RBP13.09□□□□□ -0.31
NEK3-203ENST00000551355 ZNF652Q9Y2D9 606 aa13.09□□□□□ -0.31
NEK3-203ENST00000551355 LY75O60449 1722 aa13.08□□□□□ -0.32
NEK3-203ENST00000551355 GNPATO15228 680 aa13.08□□□□□ -0.32
NEK3-203ENST00000551355 TCIRG1Q13488 830 aa13.08□□□□□ -0.32
NEK3-203ENST00000551355 CLEC4GQ6UXB4 293 aa13.08□□□□□ -0.32
NEK3-203ENST00000551355 GIGYF2Q6Y7W6 1299 aaKnown RBP13.08□□□□□ -0.32
NEK3-203ENST00000551355 CCDC136Q96JN2 1154 aa13.08□□□□□ -0.32
NEK3-203ENST00000551355 ARXQ96QS3 562 aa13.08□□□□□ -0.32
NEK3-203ENST00000551355 LRRC4BQ9NT99 713 aa13.08□□□□□ -0.32
NEK3-203ENST00000551355 COL15A1P39059 1388 aa13.07□□□□□ -0.32
NEK3-203ENST00000551355 TRAPPC3LQ5T215 181 aa13.07□□□□□ -0.32
NEK3-203ENST00000551355 PROM2Q8N271 834 aa13.07□□□□□ -0.32
NEK3-203ENST00000551355 CCDC191Q8NCU4 936 aa13.07□□□□□ -0.32
NEK3-203ENST00000551355 MYD88Q99836 296 aa13.07□□□□□ -0.32
NEK3-203ENST00000551355 ZBTB3Q9H5J0 574 aa13.07□□□□□ -0.32
NEK3-203ENST00000551355 C9orf78Q9NZ63 289 aaPredicted RBP13.07□□□□□ -0.32
NEK3-203ENST00000551355 RREB1Q92766 1687 aa13.07□□□□□ -0.32
NEK3-203ENST00000551355 NEURL1BA8MQ27 555 aa13.06□□□□□ -0.32
NEK3-203ENST00000551355 GNAI2P04899 355 aa13.06□□□□□ -0.32
NEK3-203ENST00000551355 UBTFL1P0CB47 393 aaPredicted RBP13.06□□□□□ -0.32
NEK3-203ENST00000551355 SSFA2P28290 1259 aa13.06□□□□□ -0.32
NEK3-203ENST00000551355 KCNQ4P56696 695 aa13.06□□□□□ -0.32
NEK3-203ENST00000551355 FLAD1Q8NFF5 587 aa13.06□□□□□ -0.32
NEK3-203ENST00000551355 USP44Q9H0E7 712 aa13.06□□□□□ -0.32
NEK3-203ENST00000551355 UTYO14607 1347 aa13.06□□□□□ -0.32
NEK3-203ENST00000551355 COL5A3P25940 1745 aaPredicted RBP13.05□□□□□ -0.32
NEK3-203ENST00000551355 GRM8O00222 908 aa13.05□□□□□ -0.32
NEK3-203ENST00000551355 ZPR1O75312 459 aa13.05□□□□□ -0.32
NEK3-203ENST00000551355 CAMTA2O94983 1202 aa13.05□□□□□ -0.32
NEK3-203ENST00000551355 IGKV5-2P06315 115 aa13.05□□□□□ -0.32
NEK3-203ENST00000551355 GCKRQ14397 625 aa13.05□□□□□ -0.32
NEK3-203ENST00000551355 RPAP2Q8IXW5 612 aaPredicted RBP13.05□□□□□ -0.32
NEK3-203ENST00000551355 CAMKK2Q96RR4 588 aa13.05□□□□□ -0.32
NEK3-203ENST00000551355 ISCA1Q9BUE6 129 aa13.05□□□□□ -0.32
NEK3-203ENST00000551355 RWDD1Q9H446 243 aaPredicted RBP13.05□□□□□ -0.32
NEK3-203ENST00000551355 CWC25Q9NXE8 425 aaPredicted RBP13.05□□□□□ -0.32
NEK3-203ENST00000551355 NARFQ9UHQ1 456 aa13.05□□□□□ -0.32
NEK3-203ENST00000551355 TBC1D2BQ9UPU7 963 aa13.05□□□□□ -0.32
NEK3-203ENST00000551355 RGPD3A6NKT7 1758 aaPredicted RBP13.04□□□□□ -0.32
NEK3-203ENST00000551355 RGPD4Q7Z3J3 1758 aa13.04□□□□□ -0.32
NEK3-203ENST00000551355 HSP90B1P14625 803 aaKnown RBP13.04□□□□□ -0.32
NEK3-203ENST00000551355 RFC4P35249 363 aa13.04□□□□□ -0.32
NEK3-203ENST00000551355 CWF19L2Q2TBE0 894 aaKnown RBP13.04□□□□□ -0.32
NEK3-203ENST00000551355 PARP10Q53GL7 1025 aa13.04□□□□□ -0.32
NEK3-203ENST00000551355 MEIS3Q99687 375 aa13.04□□□□□ -0.32
NEK3-203ENST00000551355 C4BP0C0L5 1744 aa13.03□□□□□ -0.32
NEK3-203ENST00000551355 HDAC1Q13547 482 aaPredicted RBP13.03□□□□□ -0.32
NEK3-203ENST00000551355 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
NEK3-203ENST00000551355 ATP5J2-PTCD1G3V325 749 aa13.02□□□□□ -0.33
NEK3-203ENST00000551355 HMMRO75330 724 aa13.02□□□□□ -0.33
NEK3-203ENST00000551355 EN1Q05925 392 aaPredicted RBP13.02□□□□□ -0.33
NEK3-203ENST00000551355 HLFQ16534 295 aa13.02□□□□□ -0.33
NEK3-203ENST00000551355 ZNF34Q8IZ26 560 aa13.02□□□□□ -0.33
NEK3-203ENST00000551355 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
NEK3-203ENST00000551355 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
NEK3-203ENST00000551355 TFCP2L1Q9NZI6 479 aa13.02□□□□□ -0.33
NEK3-203ENST00000551355 TNS1Q9HBL0 1735 aaKnown RBP13.02□□□□□ -0.33
NEK3-203ENST00000551355 H7C1W4 665 aa13.01□□□□□ -0.33
NEK3-203ENST00000551355 CENPQQ7L2Z9 268 aaPredicted RBP13.01□□□□□ -0.33
NEK3-203ENST00000551355 PPP1R42Q7Z4L9 355 aa13.01□□□□□ -0.33
NEK3-203ENST00000551355 NLRP10Q86W26 655 aa13.01□□□□□ -0.33
NEK3-203ENST00000551355 ZBTB38Q8NAP3 1195 aaPredicted RBP13.01□□□□□ -0.33
NEK3-203ENST00000551355 PCDHB15Q9Y5E8 787 aa13.01□□□□□ -0.33
NEK3-203ENST00000551355 USP42Q9H9J4 1324 aaKnown RBP13.01□□□□□ -0.33
NEK3-203ENST00000551355 N4BP2Q86UW6 1770 aaPredicted RBP13□□□□□ -0.33
NEK3-203ENST00000551355 PCCAP05165 728 aaPredicted RBP13□□□□□ -0.33
NEK3-203ENST00000551355 NBPF7P0C2Y1 421 aaPredicted RBP13□□□□□ -0.33
NEK3-203ENST00000551355 EZH2Q15910 746 aaKnown RBP13□□□□□ -0.33
NEK3-203ENST00000551355 B4GALNT3Q6L9W6 998 aa13□□□□□ -0.33
NEK3-203ENST00000551355 ANKRD44Q8N8A2 993 aa13□□□□□ -0.33
NEK3-203ENST00000551355 STK32BQ9NY57 414 aa13□□□□□ -0.33
NEK3-203ENST00000551355 EP400Q96L91 3159 aa12.99□□□□□ -0.33
NEK3-203ENST00000551355 PHF14O94880 888 aa12.99□□□□□ -0.33
NEK3-203ENST00000551355 ATP8B2P98198 1209 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms