RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 NFKBIEO00221 500 aa9.6□□□□□ -0.87
SMARCD1-210ENST00000551352 SERPINB2P05120 415 aa9.6□□□□□ -0.87
SMARCD1-210ENST00000551352 TBC1D9BQ66K14 1250 aa9.6□□□□□ -0.87
SMARCD1-210ENST00000551352 CCDC24Q8N4L8 307 aa9.6□□□□□ -0.87
SMARCD1-210ENST00000551352 RNF181Q9P0P0 153 aa9.6□□□□□ -0.87
SMARCD1-210ENST00000551352 LAMB2P55268 1798 aa9.6□□□□□ -0.87
SMARCD1-210ENST00000551352 ZPR1O75312 459 aa9.59□□□□□ -0.87
SMARCD1-210ENST00000551352 TOMM70O94826 608 aa9.59□□□□□ -0.87
SMARCD1-210ENST00000551352 PIP4K2AP48426 406 aaPredicted RBP9.59□□□□□ -0.87
SMARCD1-210ENST00000551352 RRP1P56182 461 aaKnown RBP9.59□□□□□ -0.87
SMARCD1-210ENST00000551352 IFFO2Q5TF58 517 aa9.59□□□□□ -0.87
SMARCD1-210ENST00000551352 ZNF790Q6PG37 636 aa9.59□□□□□ -0.87
SMARCD1-210ENST00000551352 WDR63Q8IWG1 891 aa9.59□□□□□ -0.87
SMARCD1-210ENST00000551352 SPINK5Q9NQ38 1064 aaPredicted RBP9.59□□□□□ -0.87
SMARCD1-210ENST00000551352 GNAT3A8MTJ3 354 aa9.58□□□□□ -0.88
SMARCD1-210ENST00000551352 POTECB2RU33 542 aa9.58□□□□□ -0.88
SMARCD1-210ENST00000551352 CAMTA2O94983 1202 aa9.58□□□□□ -0.88
SMARCD1-210ENST00000551352 A1BGP04217 495 aa9.58□□□□□ -0.88
SMARCD1-210ENST00000551352 PRKAR2BP31323 418 aa9.58□□□□□ -0.88
SMARCD1-210ENST00000551352 TMPOP42166 694 aaKnown RBP9.58□□□□□ -0.88
SMARCD1-210ENST00000551352 NEUROD2Q15784 382 aa9.58□□□□□ -0.88
SMARCD1-210ENST00000551352 PRR5LQ6MZQ0 368 aa9.58□□□□□ -0.88
SMARCD1-210ENST00000551352 BICDL1Q6ZP65 573 aa9.58□□□□□ -0.88
SMARCD1-210ENST00000551352 TBC1D2BQ9UPU7 963 aa9.58□□□□□ -0.88
SMARCD1-210ENST00000551352 ADAMTSL1Q8N6G6 1762 aa9.58□□□□□ -0.88
SMARCD1-210ENST00000551352 C2CD5Q86YS7 1000 aa9.57□□□□□ -0.88
SMARCD1-210ENST00000551352 RBM46Q8TBY0 533 aaKnown RBP9.57□□□□□ -0.88
SMARCD1-210ENST00000551352 RRAGCQ9HB90 399 aa9.57□□□□□ -0.88
SMARCD1-210ENST00000551352 USP16Q9Y5T5 823 aa9.57□□□□□ -0.88
SMARCD1-210ENST00000551352 ANKRD36CQ5JPF3 1778 aa9.57□□□□□ -0.88
SMARCD1-210ENST00000551352 COL4A5P29400 1685 aa9.56□□□□□ -0.88
SMARCD1-210ENST00000551352 NEFMP07197 916 aa9.56□□□□□ -0.88
SMARCD1-210ENST00000551352 APLP1P51693 650 aa9.56□□□□□ -0.88
SMARCD1-210ENST00000551352 DCTN1Q14203 1278 aa9.56□□□□□ -0.88
SMARCD1-210ENST00000551352 GAS2L2Q8NHY3 880 aa9.56□□□□□ -0.88
SMARCD1-210ENST00000551352 PPP4R2Q9NY27 417 aa9.56□□□□□ -0.88
SMARCD1-210ENST00000551352 TRIM35Q9UPQ4 493 aa9.56□□□□□ -0.88
SMARCD1-210ENST00000551352 SCN4AP35499 1836 aa9.56□□□□□ -0.88
SMARCD1-210ENST00000551352 SNED1Q8TER0 1413 aa9.56□□□□□ -0.88
SMARCD1-210ENST00000551352 TAF1P21675 1872 aa9.55□□□□□ -0.88
SMARCD1-210ENST00000551352 NBPF26B4DH59 902 aa9.55□□□□□ -0.88
SMARCD1-210ENST00000551352 IL6STP40189 918 aaPredicted RBP9.55□□□□□ -0.88
SMARCD1-210ENST00000551352 TEFQ10587 303 aa9.55□□□□□ -0.88
SMARCD1-210ENST00000551352 NFE2L2Q16236 605 aa9.55□□□□□ -0.88
SMARCD1-210ENST00000551352 NBPF10Q6P3W6 841 aaKnown RBP9.55□□□□□ -0.88
SMARCD1-210ENST00000551352 MCM10Q7L590 875 aa9.55□□□□□ -0.88
SMARCD1-210ENST00000551352 TTC5Q8N0Z6 440 aa9.55□□□□□ -0.88
SMARCD1-210ENST00000551352 NBPF15Q8N660 670 aa9.55□□□□□ -0.88
SMARCD1-210ENST00000551352 LTBP1Q14766 1721 aa9.55□□□□□ -0.88
SMARCD1-210ENST00000551352 IL16Q14005 1332 aa9.55□□□□□ -0.88
SMARCD1-210ENST00000551352 RIPK4P57078 832 aa9.54□□□□□ -0.88
SMARCD1-210ENST00000551352 SLC51AQ86UW1 340 aa9.54□□□□□ -0.88
SMARCD1-210ENST00000551352 TTLL6Q8N841 843 aa9.54□□□□□ -0.88
SMARCD1-210ENST00000551352 FMNL2Q96PY5 1086 aa9.54□□□□□ -0.88
SMARCD1-210ENST00000551352 MYH16Q9H6N6 1097 aa9.54□□□□□ -0.88
SMARCD1-210ENST00000551352 ZNF219Q9P2Y4 722 aaPredicted RBP9.54□□□□□ -0.88
SMARCD1-210ENST00000551352 BTBD11A6QL63 1104 aa9.53□□□□□ -0.88
SMARCD1-210ENST00000551352 STARD3NLO95772 234 aa9.53□□□□□ -0.88
SMARCD1-210ENST00000551352 LMNB1P20700 586 aa9.53□□□□□ -0.88
SMARCD1-210ENST00000551352 ZNF330Q9Y3S2 320 aaPredicted RBP9.53□□□□□ -0.88
SMARCD1-210ENST00000551352 KDM2BQ8NHM5 1336 aa9.53□□□□□ -0.88
SMARCD1-210ENST00000551352 ZC3H4Q9UPT8 1303 aaKnown RBP9.53□□□□□ -0.88
SMARCD1-210ENST00000551352 A0A087WZG4 1122 aa9.52□□□□□ -0.89
SMARCD1-210ENST00000551352 GLTPD2A6NH11 291 aa9.52□□□□□ -0.89
SMARCD1-210ENST00000551352 H0YIN7 160 aa9.52□□□□□ -0.89
SMARCD1-210ENST00000551352 C21orf2O43822 256 aa9.52□□□□□ -0.89
SMARCD1-210ENST00000551352 POTEIP0CG38 1075 aa9.52□□□□□ -0.89
SMARCD1-210ENST00000551352 POTEJP0CG39 1038 aa9.52□□□□□ -0.89
SMARCD1-210ENST00000551352 FSTL1Q12841 308 aa9.52□□□□□ -0.89
SMARCD1-210ENST00000551352 OLFM4Q6UX06 510 aa9.52□□□□□ -0.89
SMARCD1-210ENST00000551352 DZIP3Q86Y13 1208 aaKnown RBP9.52□□□□□ -0.89
SMARCD1-210ENST00000551352 JMYQ8N9B5 988 aa9.52□□□□□ -0.89
SMARCD1-210ENST00000551352 KLRG1Q96E93 195 aa9.52□□□□□ -0.89
SMARCD1-210ENST00000551352 BRIP1Q9BX63 1249 aa9.52□□□□□ -0.89
SMARCD1-210ENST00000551352 FANCIQ9NVI1 1328 aa9.52□□□□□ -0.89
SMARCD1-210ENST00000551352 ABCC12Q96J65 1359 aa9.51□□□□□ -0.89
SMARCD1-210ENST00000551352 PLIN1O60240 522 aa9.51□□□□□ -0.89
SMARCD1-210ENST00000551352 SRGNP10124 158 aa9.51□□□□□ -0.89
SMARCD1-210ENST00000551352 HLFQ16534 295 aa9.51□□□□□ -0.89
SMARCD1-210ENST00000551352 C7orf43Q8WVR3 580 aa9.51□□□□□ -0.89
SMARCD1-210ENST00000551352 ZNF622Q969S3 477 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMARCD1-210ENST00000551352 TEX13AQ9BXU3 409 aaPredicted RBP9.51□□□□□ -0.89
SMARCD1-210ENST00000551352 MIS18AQ9NYP9 233 aa9.51□□□□□ -0.89
SMARCD1-210ENST00000551352 LTBP3Q9NS15 1303 aa9.51□□□□□ -0.89
SMARCD1-210ENST00000551352 DDX60Q8IY21 1712 aaKnown RBP9.51□□□□□ -0.89
SMARCD1-210ENST00000551352 KLRG2A4D1S0 409 aaPredicted RBP9.5□□□□□ -0.89
SMARCD1-210ENST00000551352 CALD1Q05682 793 aaKnown RBP9.5□□□□□ -0.89
SMARCD1-210ENST00000551352 LMOD3Q0VAK6 560 aa9.5□□□□□ -0.89
SMARCD1-210ENST00000551352 PRPF40BQ6NWY9 871 aaKnown RBP9.5□□□□□ -0.89
SMARCD1-210ENST00000551352 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.5□□□□□ -0.89
SMARCD1-210ENST00000551352 CNBD1Q8NA66 436 aa9.5□□□□□ -0.89
SMARCD1-210ENST00000551352 COL4A1P02462 1669 aa9.5□□□□□ -0.89
SMARCD1-210ENST00000551352 CT47B1P0C2W7 299 aaPredicted RBP9.49□□□□□ -0.89
SMARCD1-210ENST00000551352 PDE6BP35913 854 aa9.49□□□□□ -0.89
SMARCD1-210ENST00000551352 STYK1Q6J9G0 422 aa9.49□□□□□ -0.89
SMARCD1-210ENST00000551352 B4GALNT3Q6L9W6 998 aa9.49□□□□□ -0.89
SMARCD1-210ENST00000551352 EXOC6Q8TAG9 804 aa9.49□□□□□ -0.89
SMARCD1-210ENST00000551352 TSR2Q969E8 191 aaKnown RBP9.49□□□□□ -0.89
SMARCD1-210ENST00000551352 THUMPD2Q9BTF0 503 aaKnown RBP9.49□□□□□ -0.89
SMARCD1-210ENST00000551352 TRPM7Q96QT4 1865 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms