RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 CCDC9Q9Y3X0 531 aaKnown RBP19.01■□□□□ 0.63
SCN8A-206ENST00000550891 UTYO14607 1347 aa19.01■□□□□ 0.63
SCN8A-206ENST00000550891 AOX1Q06278 1338 aa19.01■□□□□ 0.63
SCN8A-206ENST00000550891 A0A0G2JS52 829 aa19.01■□□□□ 0.63
SCN8A-206ENST00000550891 A1BGP04217 495 aa19.01■□□□□ 0.63
SCN8A-206ENST00000550891 RBM42Q9BTD8 480 aaKnown RBP19.01■□□□□ 0.63
SCN8A-206ENST00000550891 STAP2Q9UGK3 403 aa19.01■□□□□ 0.63
SCN8A-206ENST00000550891 ATP5J2-PTCD1G3V325 749 aa19.01■□□□□ 0.63
SCN8A-206ENST00000550891 ERC2O15083 957 aa19.01■□□□□ 0.63
SCN8A-206ENST00000550891 ARXQ96QS3 562 aa19■□□□□ 0.63
SCN8A-206ENST00000550891 A0A087WZG4 1122 aa19■□□□□ 0.63
SCN8A-206ENST00000550891 IFIT2P09913 472 aaKnown RBP19■□□□□ 0.63
SCN8A-206ENST00000550891 UBE3BQ7Z3V4 1068 aa18.99■□□□□ 0.63
SCN8A-206ENST00000550891 STARD3NLO95772 234 aa18.99■□□□□ 0.63
SCN8A-206ENST00000550891 LRP10Q7Z4F1 713 aa18.99■□□□□ 0.63
SCN8A-206ENST00000550891 CDCA7Q9BWT1 371 aaPredicted RBP18.99■□□□□ 0.63
SCN8A-206ENST00000550891 PA2G4Q9UQ80 394 aaKnown RBP18.99■□□□□ 0.63
SCN8A-206ENST00000550891 SALL3Q9BXA9 1300 aa18.99■□□□□ 0.63
SCN8A-206ENST00000550891 NBPF26B4DH59 902 aa18.98■□□□□ 0.63
SCN8A-206ENST00000550891 NBPF14Q5TI25 921 aa18.98■□□□□ 0.63
SCN8A-206ENST00000550891 NBPF10Q6P3W6 841 aaKnown RBP18.98■□□□□ 0.63
SCN8A-206ENST00000550891 NBPF15Q8N660 670 aa18.98■□□□□ 0.63
SCN8A-206ENST00000550891 PIGBQ92521 554 aa18.98■□□□□ 0.63
SCN8A-206ENST00000550891 HSP90AA1P07900 732 aaKnown RBP18.98■□□□□ 0.63
SCN8A-206ENST00000550891 SPRYD3Q8NCJ5 442 aa18.98■□□□□ 0.63
SCN8A-206ENST00000550891 LTBP4Q8N2S1 1624 aa18.98■□□□□ 0.63
SCN8A-206ENST00000550891 ZBTB3Q9H5J0 574 aa18.98■□□□□ 0.63
SCN8A-206ENST00000550891 ASAP1Q9ULH1 1129 aa18.98■□□□□ 0.63
SCN8A-206ENST00000550891 SIL1Q9H173 461 aa18.97■□□□□ 0.63
SCN8A-206ENST00000550891 KAT6BQ8WYB5 2073 aa18.97■□□□□ 0.63
SCN8A-206ENST00000550891 TTLL7Q6ZT98 887 aa18.96■□□□□ 0.63
SCN8A-206ENST00000550891 CNTROBQ8N137 903 aa18.96■□□□□ 0.63
SCN8A-206ENST00000550891 JARID2Q92833 1246 aaPredicted RBP18.96■□□□□ 0.63
SCN8A-206ENST00000550891 CWC25Q9NXE8 425 aaPredicted RBP18.96■□□□□ 0.63
SCN8A-206ENST00000550891 CHMP3Q9Y3E7 222 aa18.96■□□□□ 0.63
SCN8A-206ENST00000550891 GLRX3O76003 335 aaKnown RBP18.95■□□□□ 0.62
SCN8A-206ENST00000550891 DDB1Q16531 1140 aa18.95■□□□□ 0.62
SCN8A-206ENST00000550891 KIF6Q6ZMV9 814 aa18.95■□□□□ 0.62
SCN8A-206ENST00000550891 VSIG10Q8N0Z9 540 aa18.95■□□□□ 0.62
SCN8A-206ENST00000550891 KAZALD1Q96I82 304 aa18.95■□□□□ 0.62
SCN8A-206ENST00000550891 MCCP23508 829 aa18.95■□□□□ 0.62
SCN8A-206ENST00000550891 AACSQ86V21 672 aa18.95■□□□□ 0.62
SCN8A-206ENST00000550891 USP26Q9BXU7 913 aa18.95■□□□□ 0.62
SCN8A-206ENST00000550891 TTC41PQ6P2S7 1318 aa18.94■□□□□ 0.62
SCN8A-206ENST00000550891 UBAP1LF5GYI3 381 aa18.94■□□□□ 0.62
SCN8A-206ENST00000550891 DNAJC10Q8IXB1 793 aa18.94■□□□□ 0.62
SCN8A-206ENST00000550891 SNX21Q969T3 373 aa18.94■□□□□ 0.62
SCN8A-206ENST00000550891 LAMB4A4D0S4 1761 aa18.94■□□□□ 0.62
SCN8A-206ENST00000550891 ATG3Q9NT62 314 aa18.94■□□□□ 0.62
SCN8A-206ENST00000550891 THRAP3Q9Y2W1 955 aaKnown RBP18.94■□□□□ 0.62
SCN8A-206ENST00000550891 TNS2Q63HR2 1409 aa18.94■□□□□ 0.62
SCN8A-206ENST00000550891 COL22A1Q8NFW1 1626 aaPredicted RBP18.94■□□□□ 0.62
SCN8A-206ENST00000550891 KCPQ6ZWJ8 1503 aa18.94■□□□□ 0.62
SCN8A-206ENST00000550891 PHLPP1O60346 1717 aa18.93■□□□□ 0.62
SCN8A-206ENST00000550891 RABEP1Q15276 862 aa18.93■□□□□ 0.62
SCN8A-206ENST00000550891 ECHDC1Q9NTX5 307 aa18.93■□□□□ 0.62
SCN8A-206ENST00000550891 DISP2A7MBM2 1401 aa18.93■□□□□ 0.62
SCN8A-206ENST00000550891 MAP4K4O95819 1239 aaPredicted RBP18.93■□□□□ 0.62
SCN8A-206ENST00000550891 ESYT1Q9BSJ8 1104 aa18.92■□□□□ 0.62
SCN8A-206ENST00000550891 ANO2Q9NQ90 1003 aa18.92■□□□□ 0.62
SCN8A-206ENST00000550891 NFKBIBQ15653 356 aa18.92■□□□□ 0.62
SCN8A-206ENST00000550891 CHMLP26374 656 aa18.92■□□□□ 0.62
SCN8A-206ENST00000550891 CCDC191Q8NCU4 936 aa18.92■□□□□ 0.62
SCN8A-206ENST00000550891 EPHA10Q5JZY3 1008 aa18.91■□□□□ 0.62
SCN8A-206ENST00000550891 SHANK3Q9BYB0 1731 aa18.91■□□□□ 0.62
SCN8A-206ENST00000550891 SPATA31A1Q5TZJ5 1347 aa18.91■□□□□ 0.62
SCN8A-206ENST00000550891 PRIM1P49642 420 aaKnown RBP18.91■□□□□ 0.62
SCN8A-206ENST00000550891 PI4K2BQ8TCG2 481 aa18.91■□□□□ 0.62
SCN8A-206ENST00000550891 KLHDC4Q8TBB5 520 aa18.9■□□□□ 0.62
SCN8A-206ENST00000550891 COL16A1Q07092 1604 aaPredicted RBP18.9■□□□□ 0.62
SCN8A-206ENST00000550891 LMBR1LQ6UX01 489 aa18.89■□□□□ 0.62
SCN8A-206ENST00000550891 UNC5CLQ8IV45 518 aa18.89■□□□□ 0.62
SCN8A-206ENST00000550891 KIF2CQ99661 725 aa18.89■□□□□ 0.62
SCN8A-206ENST00000550891 UBR2Q8IWV8 1755 aa18.89■□□□□ 0.62
SCN8A-206ENST00000550891 ST18O60284 1047 aa18.89■□□□□ 0.61
SCN8A-206ENST00000550891 COPRSQ9NQ92 184 aa18.89■□□□□ 0.61
SCN8A-206ENST00000550891 DIAPH3Q9NSV4 1193 aa18.89■□□□□ 0.61
SCN8A-206ENST00000550891 KIAA1211Q6ZU35 1233 aa18.88■□□□□ 0.61
SCN8A-206ENST00000550891 CCDC8Q9H0W5 538 aaPredicted RBP18.88■□□□□ 0.61
SCN8A-206ENST00000550891 BCL9O00512 1426 aa18.88■□□□□ 0.61
SCN8A-206ENST00000550891 K7ELQ4 463 aaPredicted RBP18.88■□□□□ 0.61
SCN8A-206ENST00000550891 SASH1O94885 1247 aa18.88■□□□□ 0.61
SCN8A-206ENST00000550891 GLI3P10071 1580 aa18.87■□□□□ 0.61
SCN8A-206ENST00000550891 H7C1W4 665 aa18.87■□□□□ 0.61
SCN8A-206ENST00000550891 RABL6Q3YEC7 729 aaPredicted RBP18.87■□□□□ 0.61
SCN8A-206ENST00000550891 CHMP5Q9NZZ3 219 aa18.87■□□□□ 0.61
SCN8A-206ENST00000550891 PAPPAQ13219 1627 aa18.87■□□□□ 0.61
SCN8A-206ENST00000550891 RUFY2Q8WXA3 655 aa18.87■□□□□ 0.61
SCN8A-206ENST00000550891 USP42Q9H9J4 1324 aaKnown RBP18.87■□□□□ 0.61
SCN8A-206ENST00000550891 ARFGEF2Q9Y6D5 1785 aa18.87■□□□□ 0.61
SCN8A-206ENST00000550891 COL15A1P39059 1388 aa18.86■□□□□ 0.61
SCN8A-206ENST00000550891 TCIRG1Q13488 830 aa18.86■□□□□ 0.61
SCN8A-206ENST00000550891 NGLY1Q96IV0 654 aa18.86■□□□□ 0.61
SCN8A-206ENST00000550891 AFDNP55196 1824 aaKnown RBP18.86■□□□□ 0.61
SCN8A-206ENST00000550891 TOGARAM1Q9Y4F4 1720 aa18.86■□□□□ 0.61
SCN8A-206ENST00000550891 EAF2Q96CJ1 260 aaPredicted RBP18.86■□□□□ 0.61
SCN8A-206ENST00000550891 SPATA31A5Q5VU36 1347 aa18.85■□□□□ 0.61
SCN8A-206ENST00000550891 SPATA31A7Q8IWB4 1347 aa18.85■□□□□ 0.61
SCN8A-206ENST00000550891 PTPN12Q05209 780 aaKnown RBP18.85■□□□□ 0.61
SCN8A-206ENST00000550891 HSP90AB3PQ58FF7 597 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms