RNA–Protein interactions for RNA: ENST00000550846.5

PFDN5-211, Transcript of prefoldin subunit 5, humanhuman

TSL 2 BASIC

Gene PFDN5, Length 392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-211ENST00000550846 U2AF1Q01081 240 aaKnown RBP eCLIP10.73□□□□□ -0.69
PFDN5-211ENST00000550846 DPY19L2Q6NUT2 758 aa10.73□□□□□ -0.69
PFDN5-211ENST00000550846 PRPF40BQ6NWY9 871 aaKnown RBP10.73□□□□□ -0.69
PFDN5-211ENST00000550846 OLFM4Q6UX06 510 aa10.73□□□□□ -0.69
PFDN5-211ENST00000550846 NBPF5PQ86XG9 351 aaPredicted RBP10.73□□□□□ -0.69
PFDN5-211ENST00000550846 CFAP53Q96M91 514 aa10.73□□□□□ -0.69
PFDN5-211ENST00000550846 TAOK3Q9H2K8 898 aa10.73□□□□□ -0.69
PFDN5-211ENST00000550846 CEMIPQ8WUJ3 1361 aa10.73□□□□□ -0.69
PFDN5-211ENST00000550846 CCDC88AQ3V6T2 1871 aa10.72□□□□□ -0.69
PFDN5-211ENST00000550846 DDNO94850 711 aaPredicted RBP10.72□□□□□ -0.69
PFDN5-211ENST00000550846 PCNTO95613 3336 aa10.72□□□□□ -0.69
PFDN5-211ENST00000550846 CACNA1SQ13698 1873 aa10.72□□□□□ -0.69
PFDN5-211ENST00000550846 HSPA1AP0DMV8 641 aaKnown RBP10.71□□□□□ -0.69
PFDN5-211ENST00000550846 HSPA1BP0DMV9 641 aaKnown RBP10.71□□□□□ -0.69
PFDN5-211ENST00000550846 SRGNP10124 158 aa10.71□□□□□ -0.69
PFDN5-211ENST00000550846 SLX4Q8IY92 1834 aa10.71□□□□□ -0.69
PFDN5-211ENST00000550846 TNS4Q8IZW8 715 aa10.71□□□□□ -0.69
PFDN5-211ENST00000550846 NGEFQ8N5V2 710 aa10.71□□□□□ -0.69
PFDN5-211ENST00000550846 RTF1Q92541 710 aaKnown RBP10.71□□□□□ -0.69
PFDN5-211ENST00000550846 CNKSR1Q969H4 720 aa10.71□□□□□ -0.69
PFDN5-211ENST00000550846 MIS18AQ9NYP9 233 aa10.71□□□□□ -0.69
PFDN5-211ENST00000550846 MKRN1Q9UHC7 482 aaKnown RBP10.71□□□□□ -0.69
PFDN5-211ENST00000550846 NPC1L1Q9UHC9 1359 aa10.71□□□□□ -0.69
PFDN5-211ENST00000550846 BCORQ6W2J9 1755 aa10.7□□□□□ -0.7
PFDN5-211ENST00000550846 STYK1Q6J9G0 422 aa10.7□□□□□ -0.7
PFDN5-211ENST00000550846 MASTLQ96GX5 879 aa10.7□□□□□ -0.7
PFDN5-211ENST00000550846 NIP7Q9Y221 180 aaKnown RBP eCLIP10.7□□□□□ -0.7
PFDN5-211ENST00000550846 NUDCQ9Y266 331 aa10.7□□□□□ -0.7
PFDN5-211ENST00000550846 NBPF26B4DH59 902 aa10.69□□□□□ -0.7
PFDN5-211ENST00000550846 SNRPA1P09661 255 aaKnown RBP10.69□□□□□ -0.7
PFDN5-211ENST00000550846 PPP2R1AP30153 589 aa10.69□□□□□ -0.7
PFDN5-211ENST00000550846 EAPPQ56P03 285 aaPredicted RBP10.69□□□□□ -0.7
PFDN5-211ENST00000550846 CHADLQ6NUI6 762 aa10.69□□□□□ -0.7
PFDN5-211ENST00000550846 NBPF10Q6P3W6 841 aaKnown RBP10.69□□□□□ -0.7
PFDN5-211ENST00000550846 NBPF15Q8N660 670 aa10.69□□□□□ -0.7
PFDN5-211ENST00000550846 ZNF277Q9NRM2 450 aaPredicted RBP10.69□□□□□ -0.7
PFDN5-211ENST00000550846 FER1L6Q2WGJ9 1857 aa10.68□□□□□ -0.7
PFDN5-211ENST00000550846 ZNF541Q9H0D2 1346 aa10.68□□□□□ -0.7
PFDN5-211ENST00000550846 HLFQ16534 295 aa10.68□□□□□ -0.7
PFDN5-211ENST00000550846 PDZRN3Q9UPQ7 1066 aa10.68□□□□□ -0.7
PFDN5-211ENST00000550846 ZNF652Q9Y2D9 606 aa10.68□□□□□ -0.7
PFDN5-211ENST00000550846 LTBP3Q9NS15 1303 aa10.67□□□□□ -0.7
PFDN5-211ENST00000550846 NPR1P16066 1061 aa10.67□□□□□ -0.7
PFDN5-211ENST00000550846 GTF2E1P29083 439 aaPredicted RBP10.67□□□□□ -0.7
PFDN5-211ENST00000550846 CCDC93Q567U6 631 aa10.67□□□□□ -0.7
PFDN5-211ENST00000550846 SLC51AQ86UW1 340 aa10.67□□□□□ -0.7
PFDN5-211ENST00000550846 NUTM1Q86Y26 1132 aa10.67□□□□□ -0.7
PFDN5-211ENST00000550846 TCERG1O14776 1098 aaKnown RBP10.66□□□□□ -0.7
PFDN5-211ENST00000550846 SOGA3Q5TF21 947 aa10.66□□□□□ -0.7
PFDN5-211ENST00000550846 C7orf43Q8WVR3 580 aa10.66□□□□□ -0.7
PFDN5-211ENST00000550846 THUMPD2Q9BTF0 503 aaKnown RBP10.66□□□□□ -0.7
PFDN5-211ENST00000550846 CLEC11AQ9Y240 323 aa10.66□□□□□ -0.7
PFDN5-211ENST00000550846 RRP7AQ9Y3A4 280 aaKnown RBP10.66□□□□□ -0.7
PFDN5-211ENST00000550846 ABCC12Q96J65 1359 aa10.65□□□□□ -0.7
PFDN5-211ENST00000550846 RNF123Q5XPI4 1314 aa10.65□□□□□ -0.7
PFDN5-211ENST00000550846 MYL6BP14649 208 aa10.65□□□□□ -0.7
PFDN5-211ENST00000550846 GPTP24298 496 aa10.65□□□□□ -0.7
PFDN5-211ENST00000550846 FKBP4Q02790 459 aaKnown RBP eCLIP10.65□□□□□ -0.7
PFDN5-211ENST00000550846 CLEC4GQ6UXB4 293 aa10.65□□□□□ -0.7
PFDN5-211ENST00000550846 TPTE2Q6XPS3 522 aa10.65□□□□□ -0.7
PFDN5-211ENST00000550846 TAF1DQ9H5J8 278 aaPredicted RBP10.65□□□□□ -0.7
PFDN5-211ENST00000550846 CREBZFQ9NS37 354 aa10.65□□□□□ -0.7
PFDN5-211ENST00000550846 DICER1Q9UPY3 1922 aaKnown RBP10.64□□□□□ -0.71
PFDN5-211ENST00000550846 IQCA1LA6NCM1 817 aa10.64□□□□□ -0.71
PFDN5-211ENST00000550846 TAF7Q15545 349 aaPredicted RBP10.64□□□□□ -0.71
PFDN5-211ENST00000550846 TTLL7Q6ZT98 887 aa10.64□□□□□ -0.71
PFDN5-211ENST00000550846 ZBTB3Q9H5J0 574 aa10.64□□□□□ -0.71
PFDN5-211ENST00000550846 ARFGEF2Q9Y6D5 1785 aa10.64□□□□□ -0.71
PFDN5-211ENST00000550846 MAP1SQ66K74 1059 aaPredicted RBP10.63□□□□□ -0.71
PFDN5-211ENST00000550846 LDHDQ86WU2 507 aa10.63□□□□□ -0.71
PFDN5-211ENST00000550846 SYNE4Q8N205 404 aa10.63□□□□□ -0.71
PFDN5-211ENST00000550846 HACL1Q9UJ83 578 aa10.63□□□□□ -0.71
PFDN5-211ENST00000550846 GJA3Q9Y6H8 435 aa10.63□□□□□ -0.71
PFDN5-211ENST00000550846 KLRG2A4D1S0 409 aaPredicted RBP10.62□□□□□ -0.71
PFDN5-211ENST00000550846 FOXN1O15353 648 aa10.62□□□□□ -0.71
PFDN5-211ENST00000550846 NEFMP07197 916 aa10.62□□□□□ -0.71
PFDN5-211ENST00000550846 EPHX2P34913 555 aa10.62□□□□□ -0.71
PFDN5-211ENST00000550846 IARSP41252 1262 aaKnown RBP10.62□□□□□ -0.71
PFDN5-211ENST00000550846 KIF6Q6ZMV9 814 aa10.62□□□□□ -0.71
PFDN5-211ENST00000550846 RTKN2Q8IZC4 609 aa10.62□□□□□ -0.71
PFDN5-211ENST00000550846 RPGRQ92834 1020 aaKnown RBP10.62□□□□□ -0.71
PFDN5-211ENST00000550846 L3MBTL3Q96JM7 780 aaPredicted RBP10.62□□□□□ -0.71
PFDN5-211ENST00000550846 CNTNAP1P78357 1384 aa10.62□□□□□ -0.71
PFDN5-211ENST00000550846 UBN2Q6ZU65 1347 aa10.61□□□□□ -0.71
PFDN5-211ENST00000550846 COL4A5P29400 1685 aa10.61□□□□□ -0.71
PFDN5-211ENST00000550846 VEGFBP49765 207 aa10.61□□□□□ -0.71
PFDN5-211ENST00000550846 C3orf67Q6ZVT6 689 aa10.61□□□□□ -0.71
PFDN5-211ENST00000550846 ZNF428Q96B54 188 aa10.61□□□□□ -0.71
PFDN5-211ENST00000550846 LAMB4A4D0S4 1761 aa10.61□□□□□ -0.71
PFDN5-211ENST00000550846 MAP3K15Q6ZN16 1313 aa10.6□□□□□ -0.71
PFDN5-211ENST00000550846 PASKQ96RG2 1323 aa10.6□□□□□ -0.71
PFDN5-211ENST00000550846 TMEM88BA6NKF7 163 aa10.6□□□□□ -0.71
PFDN5-211ENST00000550846 HTATSF1O43719 755 aaKnown RBP10.6□□□□□ -0.71
PFDN5-211ENST00000550846 ANXA1P04083 346 aa10.6□□□□□ -0.71
PFDN5-211ENST00000550846 ALDH1B1P30837 517 aa10.6□□□□□ -0.71
PFDN5-211ENST00000550846 EIF4A1P60842 406 aaKnown RBP10.6□□□□□ -0.71
PFDN5-211ENST00000550846 FMR1Q06787 632 aaKnown RBP eCLIP10.6□□□□□ -0.71
PFDN5-211ENST00000550846 GRM1Q13255 1194 aa10.6□□□□□ -0.71
PFDN5-211ENST00000550846 SUSD4Q5VX71 490 aa10.6□□□□□ -0.71
PFDN5-211ENST00000550846 JDP2Q8WYK2 163 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms